Spg017778 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017778
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DUF2431 domain-containing protein
Location	scaffold9: 34439400 .. 34442098 (+)
RNA-Seq Expression	Spg017778
Synteny	Spg017778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACTTGAACAGTACAGAATTATTCCGATCTGAGGCCGAGATCAAGACCATAAAGCATTACAATAGCTCCCAAAGAATACTCCTCGTCGGAGAAGGCAACTTCTCCTTCTCTGCTTGCTTGGCCAAGGCGTTCGGCTCGGCTGCTAACATGTTTGCCACTTCCCTCGACTCTAAAGGTATTTAAGTTTATCTACCCTCTCAAGAAATTATTTGAGAGACTAGAACAATGTAATTCATATCATGGTTTTACTAGATAAAATATGTCACGTAGGAGAGAAATCAAGATCGTGTGTCATAACCATGAAAAAACTAGTCTCATTTGTGAAAGTAAGATAATTAATTATTGGATATACATGGTCGTCGTCAGTTTTTATCTCGTGTATTTTAGATCTCCATCTAGCCATATTTTAATTCTCTTGCTTATTCAAATAATTTTCACCATGTTGTAGCGGCTACATTAAATAATTTTTTCTGTTGATGTTTTTGAACATGCAACTGAAGAGTCATTGTTGAGGAAGTACACTCATGTCGCCACAAACTTGAAAGTCTTGGAGGAGCTTGGGTGCACTGTGGTGCATGAAGTGAATGCAACAACGATGAGCCAACACCCACTTCTCCGCTACGAATCATTCGATCGCATAGTCTTCAACTTCCCGCATGCCGGGTTTCGGTTTCTTTATAGGGAACATGACATAGAACAAATTGAGTGAGTATATATACATAGCAAAATTAATCAAACCAAACCCTAGTTTTAGATTAAAGTTGTAAAAAGTAGATGGCTCTTTAGTATTATAAAATTTTGCTCCTCCCTATGAAAATTTATGACTCCGCCCCTGTTTGCGGATATTTACGAGTTGGGTTTTGCCGTTTTTTGACAGACTCCACCGGGATCTAGTGAGAGGGTTTCTGAGGAATGCAAAGGAAATGGTGGGTGAAAATGGTGAAATTCACATCACCCACAAGACTGCAAATCCTTTCGATAAATGGAAGATTGAGGAATTGGCTGAAGAAGTGGGGCTGTTTCTGAAAGAGAGAGCAGAGTTTTTCAAATGGGAATATCCAAATTATGAGAATAAGAAAGGAGATGGATTGAAAAGCGACAGCACTTTCCCCGTTGGAGAATGCAGCACTTACAAATTTGCAACAAATAATAATCTTTCCTTATGATCACCACTATGTGATCTAGTTTTTAAAATACATTAATGTTTTGATTACACATGGATCATTTATCAACCACAATTAAAAAGTGTCTGTCTTGGCTTCAAATTCTTTTGGAAGGTAAACGTTATTGGACATTTAGGAAAAAAAAATATATATATATATATATATATATAATTAGTACCTCATGATTTTTCTTTCCTTTCTGGATATTTGTTTTTATCTTAAACTAAAAAAAAGAAAGATGGATCCCAACTTTCGATTGACAATCATGTTTATGTTAATTAAGTATAAGAGTCAAAGCGAGTATAGCTCAACGATGATTGATATGTACTCTCGATCAAAAGGTCAGAACACCCCAAATGTTGATGTACGACAAGTAACGTAGCATTAAGAGAGTTTGGTTATGGTGGCTCAATTTTCTCTTAATCAATGGATGTCATATTTCAGCCTAAAAAAATGTAAGTGTGACCTTGTAATTGGAAGCAACAAATTAAAGTAAGAAAGTTGTCCAAGTCTTCAAGCAAACCTTCTGACATTTAAAACTCATCATTTCCTTTATTTAATGATCTCTTATTCCAAGTTCAACTTGCACCTTCCATCTTCCAAATGCTTTTATATGTCAAAATTTTTTAATATAATACACATACACATGGTTTAGTAAAACAAAAACTGCCCAATTCTCTCTATAGATATCTCACATCAATGGATACATTCAACACAAACAACAGAGTCATTGTCGTCGAGAAGACGATTGAGCATTTTGGTTTCTAAATTTAAGATTTATTCAAATTTATATAATTTCAAAATATCTATTTTAATCCATTAAACCTTAAATATATTCTATCTATTATATATTTAACAAAACAGAAAGAAAAAAAAAATCATCGAACTAAAAGGATTATTTTCTTACGATATAAATTTTTTTAAGTTAAAAATAAGCATGAAAATGTAAAGATTTAAATAGATATCTCAACAGTTTTGATAGATTCGAATTAAACATTTAAATTATTTCAACGTGTATATTTTTCTTTGGTTAAATTACAAATTTAGTTCTTGAACTTTGAGGTTTGTGTTTATTTGGTCCCAAACTTTCAAAATTACCATTTTTGTTTCCTAAACTATTGAAAGTTTTAAATTTTAAATATCTACTAGGTTCAAAATTGTTGGGAGTGCGACCAAAGTCCCACATTGGCTAGATAAGGGGATGATCATGGATATATAAGGGAGGACAAGTATCTCCATTAGGATGAGGCCTTTTGGGTGAACCAAAAGCAAAACCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGTGGGTTTTCGGTAGTCCCTTACAAGTGGTATCTCAGAGCCATACCCCGGGCGTAGCCATGTCGGGTGGAATCCTCGGTTGCCGAACAAAGAAAGTTGTGAGTCTTGGAGTAGTCATGGGGAGATCCGTGGTTGAGCTCTGGGGGCAGGCGAGTATACTCCGGAGAAGAGGAGTCGTCCTGGATAAGAGCAAGAACTCTCGGTAA

mRNA sequence

ATGGGAGACTTGAACAGTACAGAATTATTCCGATCTGAGGCCGAGATCAAGACCATAAAGCATTACAATAGCTCCCAAAGAATACTCCTCGTCGGAGAAGGCAACTTCTCCTTCTCTGCTTGCTTGGCCAAGGCGTTCGGCTCGGCTGCTAACATGTTTGCCACTTCCCTCGACTCTAAAGAGTCATTGTTGAGGAAGTACACTCATGTCGCCACAAACTTGAAAGTCTTGGAGGAGCTTGGGTGCACTGTGGTGCATGAAGTGAATGCAACAACGATGAGCCAACACCCACTTCTCCGCTACGAATCATTCGATCGCATAGTCTTCAACTTCCCGCATGCCGGGTTTCGGTTTCTTTATAGGGAACATGACATAGAACAAATTGAACTCCACCGGGATCTAGTGAGAGGGTTTCTGAGGAATGCAAAGGAAATGGTGGGTGAAAATGGTGAAATTCACATCACCCACAAGACTGCAAATCCTTTCGATAAATGGAAGATTGAGGAATTGGCTGAAGAAGTGGGGCTTCCCTTACAAGTGGTATCTCAGAGCCATACCCCGGGCGTAGCCATGTCGGGTGGAATCCTCGGTTGCCGAACAAAGAAAGTTGTGAGTCTTGGAGTAGTCATGGGGAGATCCGTGGTTGAGCTCTGGGGGCAGGCGAGTATACTCCGGAGAAGAGGAGTCGTCCTGGATAAGAGCAAGAACTCTCGGTAA

Coding sequence (CDS)

ATGGGAGACTTGAACAGTACAGAATTATTCCGATCTGAGGCCGAGATCAAGACCATAAAGCATTACAATAGCTCCCAAAGAATACTCCTCGTCGGAGAAGGCAACTTCTCCTTCTCTGCTTGCTTGGCCAAGGCGTTCGGCTCGGCTGCTAACATGTTTGCCACTTCCCTCGACTCTAAAGAGTCATTGTTGAGGAAGTACACTCATGTCGCCACAAACTTGAAAGTCTTGGAGGAGCTTGGGTGCACTGTGGTGCATGAAGTGAATGCAACAACGATGAGCCAACACCCACTTCTCCGCTACGAATCATTCGATCGCATAGTCTTCAACTTCCCGCATGCCGGGTTTCGGTTTCTTTATAGGGAACATGACATAGAACAAATTGAACTCCACCGGGATCTAGTGAGAGGGTTTCTGAGGAATGCAAAGGAAATGGTGGGTGAAAATGGTGAAATTCACATCACCCACAAGACTGCAAATCCTTTCGATAAATGGAAGATTGAGGAATTGGCTGAAGAAGTGGGGCTTCCCTTACAAGTGGTATCTCAGAGCCATACCCCGGGCGTAGCCATGTCGGGTGGAATCCTCGGTTGCCGAACAAAGAAAGTTGTGAGTCTTGGAGTAGTCATGGGGAGATCCGTGGTTGAGCTCTGGGGGCAGGCGAGTATACTCCGGAGAAGAGGAGTCGTCCTGGATAAGAGCAAGAACTCTCGGTAA

Protein sequence

MGDLNSTELFRSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQVVSQSHTPGVAMSGGILGCRTKKVVSLGVVMGRSVVELWGQASILRRRGVVLDKSKNSR

Homology

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BLAST of Spg017778 vs. NCBI nr
Match: XP_022139691.1 (uncharacterized protein At4g26485-like [Momordica charantia])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 130/179 (72.63%), Postives = 147/179 (82.12%), Query Frame = 0


Query: 1   MGDLNSTELFRSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSK 60
           M DLN++       + K IKHY+SS  ILLVGEG+FSFS CLA  FGSAANM ATSLDSK
Sbjct: 1   MEDLNNSR------DQKWIKHYSSSHTILLVGEGDFSFSTCLATTFGSAANMVATSLDSK 60

Query: 61  ESLLRKYTHVATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLY 120
           ESLL KYTHVATNLK LEELGCTV H+V+AT+MSQHPLLR++SFDR+VFNFPHAGF F  
Sbjct: 61  ESLLSKYTHVATNLKELEELGCTVAHDVDATSMSQHPLLRHKSFDRVVFNFPHAGFHF-- 120

Query: 121 REHDIEQIELHRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQ 180
           +E DI QIELHR LVRGFLRNAKE +GE GEIHITHKTA+PF +W+I ELA E GL L+
Sbjct: 121 KESDIRQIELHRHLVRGFLRNAKEFLGEEGEIHITHKTAHPFSRWEIVELAREEGLLLK 171

[Close]

BLAST of Spg017778 vs. NCBI nr
Match: XP_024463418.1 (uncharacterized protein At4g26485 [Populus trichocarpa] >PNT59872.1 hypothetical protein POPTR_001G438200 [Populus trichocarpa])

HSP 1 Score: 231.9 bits (590), Expect = 5.8e-57
Identity = 111/166 (66.87%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 13  EAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVAT 72
           E + K I HY+S Q+ILLVGEG+FSF+ACL KAFGSAA+M ATSLDSKE L+  Y+  A 
Sbjct: 134 EEKEKWITHYSSHQKILLVGEGDFSFAACLGKAFGSAASMVATSLDSKECLVATYSRAAE 193

Query: 73  NLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHR 132
           NLK L++LGCT++HEVNA TM  HPLL  + FDRIVFNFPHAGF +LYREHDI  IE H+
Sbjct: 194 NLKKLKDLGCTILHEVNAHTMGCHPLLHEQWFDRIVFNFPHAGFHYLYREHDIRLIESHQ 253

Query: 133 DLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
            LV+GFLR+A +M+ +NGE H+THKTA+PFD+W+IE+LAE+VGL L
Sbjct: 254 KLVKGFLRSANDMLSKNGEAHVTHKTAHPFDRWEIEKLAEDVGLCL 299

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BLAST of Spg017778 vs. NCBI nr
Match: XP_028789160.1 (uncharacterized protein At4g26485-like [Prosopis alba])

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-55
Identity = 110/166 (66.27%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 11  RSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHV 70
           R   E KTIKHY+S  +ILLVGEG+FSFS CLAKAFGSA+NM ATSLDSK++L R Y+  
Sbjct: 125 RVRMEEKTIKHYSSKHKILLVGEGDFSFSLCLAKAFGSASNMVATSLDSKDTLTRNYSRA 184

Query: 71  ATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIEL 130
             NL  LE LGCT++HEVNA TMSQHP L+++ FDRIVFNFPHAG  F++REH   QIE 
Sbjct: 185 LQNLLQLENLGCTILHEVNAHTMSQHPFLQHKLFDRIVFNFPHAG--FVFREHHSFQIES 244

Query: 131 HRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGL 177
           H+ +VRGFL++++EMV E+GEIH+THKTA PF +W+IE++AEEVGL
Sbjct: 245 HKRVVRGFLKSSREMVSEDGEIHVTHKTAYPFCEWRIEKIAEEVGL 288

[Close]

BLAST of Spg017778 vs. NCBI nr
Match: XP_028771540.1 (uncharacterized protein At4g26485-like [Prosopis alba])

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-55
Identity = 110/168 (65.48%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 11  RSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHV 70
           R   E KTIKHY+S  +ILLVGEG+FSFS CLAKAFGSA+NM ATSLDS+++L R Y+  
Sbjct: 125 RVRMEEKTIKHYSSKHKILLVGEGDFSFSLCLAKAFGSASNMVATSLDSRDTLTRNYSRA 184

Query: 71  ATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIEL 130
             NL  LE LGCT++HEVNA TMSQHP L+++ FDRIVFNFPHAG  F++REH   QIE 
Sbjct: 185 LQNLLQLENLGCTILHEVNAHTMSQHPFLQHKLFDRIVFNFPHAG--FVFREHHSFQIES 244

Query: 131 HRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
           H+ +VRGFL++++EMV E+GEIH+THKTA PF +W+IE++AEEVGL L
Sbjct: 245 HKRVVRGFLKSSREMVSEDGEIHVTHKTAYPFCEWRIEKIAEEVGLQL 290

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BLAST of Spg017778 vs. NCBI nr
Match: XP_017979628.1 (PREDICTED: uncharacterized protein At4g26485 [Theobroma cacao])

HSP 1 Score: 224.6 bits (571), Expect = 9.3e-55
Identity = 110/166 (66.27%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 13  EAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVAT 72
           + E K IKHY+S   ILLVGEG+FSF+ACLA++FGSAANM ATSLDSKE L RKY+   T
Sbjct: 8   DKEEKWIKHYSSRHEILLVGEGDFSFAACLARSFGSAANMVATSLDSKEMLKRKYSGAMT 67

Query: 73  NLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHR 132
           NL+ L+ELGCT++H V+A TMS+H LL+ + FD+IVFNFPHAG  FLYRE DI QI+LH+
Sbjct: 68  NLEELKELGCTIIHGVDANTMSRHALLKSKLFDQIVFNFPHAG--FLYREQDIFQIKLHQ 127

Query: 133 DLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
           +LV+GFLRNA +M+ + GE+HITHKTA+PF +WK+E+LA+EVGL L
Sbjct: 128 NLVQGFLRNASDMLTDRGEVHITHKTAHPFGEWKVEKLAKEVGLGL 171

[Close]

BLAST of Spg017778 vs. ExPASy Swiss-Prot
Match: P0C8L4 (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.6e-47
Identity = 103/198 (52.02%), Postives = 127/198 (64.14%), Query Frame = 0


Query: 13  EAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVAT 72
           E   K I+HY+S+ +ILLVGEGNFSFS CLA AFGSA N+ ATSLDS++ L  KY     
Sbjct: 2   EISEKWIRHYSSTHKILLVGEGNFSFSLCLASAFGSAMNITATSLDSEDELSIKYMDAVD 61

Query: 73  NLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHR 132
           N+ +L+  GC + HEV+  TMS    L  + +DRIVFNFPHAG RF  RE     IE H+
Sbjct: 62  NINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFNFPHAGSRFFGRELSSRAIESHK 121

Query: 133 DLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQVVSQ---SHTPGV 192
           +LVRGFL NAKEM+ E+GEIHITHKT  PF  W I++L +  GL L   S+   SH PG 
Sbjct: 122 ELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKLGKGEGLKLLKKSKFELSHYPGY 181

Query: 193 AMSGGILGCRTKKVVSLG 208
               G  G R+     +G
Sbjct: 182 ITKRGSGGRRSDDYFPVG 199

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BLAST of Spg017778 vs. ExPASy Swiss-Prot
Match: F4I1X0 (Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX=3702 GN=HIPP41 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-40
Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 19  IKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLE 78
           +KHY+S+ +ILLVGEG+FSFS  LA  FGSA+N+ A+SLDS + ++RKY    +NLK L+
Sbjct: 21  VKHYSSNHQILLVGEGDFSFSHSLATLFGSASNICASSLDSYDVVVRKYKKARSNLKTLK 80

Query: 79  ELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGF 138
            LG  ++H V+ATT+  HP LRY  FDR++FNFPHAGF    RE D   I  HR+LV GF
Sbjct: 81  RLGALLLHGVDATTLHFHPDLRYRRFDRVIFNFPHAGFH--GRESDSSLIRKHRELVFGF 140

Query: 139 LRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
              A  ++  NGE+H++HK   PF +W +EELA    L L
Sbjct: 141 FNGASRLLRANGEVHVSHKNKAPFSEWNLEELASRCFLVL 178

[Close]

BLAST of Spg017778 vs. ExPASy Swiss-Prot
Match: O94480 (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bmt5 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 22  YNSSQRILLVGEGNFSFS-ACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLEEL 81
           +  + R LL+GEGNFSF+ + L     S   + ATS DSKE L +KY   A  +  +E  
Sbjct: 54  FEKNNRFLLLGEGNFSFAFSLLLHHVSSEGFVLATSYDSKEDLKQKYPDAAEYISKIEIN 113

Query: 82  GCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGFLR 141
           G  V+HE++AT +  H  L+ + FD I +NFPH+G     ++ +I     ++ ++  F +
Sbjct: 114 GGKVMHEIDATKLHLHKKLKTQKFDTIFWNFPHSGKGIKDQDRNILD---NQKMLLAFFK 173

Query: 142 NAKEMVGENGEIHITHKTANPFDKWKIEELAEEVG 176
            +K ++ E G I IT     P+  W ++ LA++ G
Sbjct: 174 ASKFLLSEKGVIVITLAETKPYTLWNLKGLAKDAG 205

[Close]

BLAST of Spg017778 vs. ExPASy Swiss-Prot
Match: Q9BRP7 (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FDXACB1 PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 51/167 (30.54%), Postives = 79/167 (47.31%), Query Frame = 0


Query: 26  QRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLEELGCTVV 85
           +R+LLVGEGNFSF+A L++    +  + AT L     L R       NL+ L E G  V 
Sbjct: 4   RRLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARD-PLAWENLQCLRERGIDVR 63

Query: 86  HEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGFLRNAKEM 145
             V+ T ++    L    FD+I F FPH G +          +  +R+L+  F ++  ++
Sbjct: 64  FGVDCTQLADVFELHEREFDQIYFIFPHCGRK--------AGVAKNRELLAKFFQSCADV 123

Query: 146 VGENGEIHIT---HKTANPFDK--------WKIEELAEEVGLPLQVV 182
           + E GE+H+     +   P DK        W++  +A   GL L  V
Sbjct: 124 LAEEGEVHVALCRGQGGTPADKPQREWHNSWQVVAMAALGGLILSDV 161

[Close]

BLAST of Spg017778 vs. ExPASy Swiss-Prot
Match: Q3UY23 (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 55/182 (30.22%), Postives = 83/182 (45.60%), Query Frame = 0


Query: 26  QRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLEELGCTVV 85
           +R+LLVGEGNFSF+A L      + ++ AT    + + L        NLK L E G  V 
Sbjct: 4   RRLLLVGEGNFSFAASLIDGLDPSVSVTATGFQHR-AALEGDPVALENLKRLRERGVEVR 63

Query: 86  HEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGFLRNAKEM 145
             V+ T +S         FDRI FNFPH G +          +  +R+L+  F ++  ++
Sbjct: 64  FGVDCTQLSHALPADDRDFDRIYFNFPHCGRK--------AGVAKNRELLAKFFQSCADV 123

Query: 146 VGENGEIHIT---HKTANPFDK--------WKIEELAEEVGLPLQVV---SQSHTPGVAM 194
           + + GE+H+T    +   P DK        W++  +A   G  L  V   S    PG   
Sbjct: 124 LAKAGEVHVTLCRGQGGTPADKPQREWHNSWQVVAMAALGGFILSDVCPFSCEAVPGYKC 176

[Close]

BLAST of Spg017778 vs. ExPASy TrEMBL
Match: A0A6J1CDH1 (uncharacterized protein At4g26485-like OS=Momordica charantia OX=3673 GN=LOC111010537 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 130/179 (72.63%), Postives = 147/179 (82.12%), Query Frame = 0


Query: 1   MGDLNSTELFRSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSK 60
           M DLN++       + K IKHY+SS  ILLVGEG+FSFS CLA  FGSAANM ATSLDSK
Sbjct: 1   MEDLNNSR------DQKWIKHYSSSHTILLVGEGDFSFSTCLATTFGSAANMVATSLDSK 60

Query: 61  ESLLRKYTHVATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLY 120
           ESLL KYTHVATNLK LEELGCTV H+V+AT+MSQHPLLR++SFDR+VFNFPHAGF F  
Sbjct: 61  ESLLSKYTHVATNLKELEELGCTVAHDVDATSMSQHPLLRHKSFDRVVFNFPHAGFHF-- 120

Query: 121 REHDIEQIELHRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQ 180
           +E DI QIELHR LVRGFLRNAKE +GE GEIHITHKTA+PF +W+I ELA E GL L+
Sbjct: 121 KESDIRQIELHRHLVRGFLRNAKEFLGEEGEIHITHKTAHPFSRWEIVELAREEGLLLK 171

[Close]

BLAST of Spg017778 vs. ExPASy TrEMBL
Match: A0A2K2CCX1 (DUF2431 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G438200 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57
Identity = 111/166 (66.87%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 13  EAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVAT 72
           E + K I HY+S Q+ILLVGEG+FSF+ACL KAFGSAA+M ATSLDSKE L+  Y+  A 
Sbjct: 134 EEKEKWITHYSSHQKILLVGEGDFSFAACLGKAFGSAASMVATSLDSKECLVATYSRAAE 193

Query: 73  NLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHR 132
           NLK L++LGCT++HEVNA TM  HPLL  + FDRIVFNFPHAGF +LYREHDI  IE H+
Sbjct: 194 NLKKLKDLGCTILHEVNAHTMGCHPLLHEQWFDRIVFNFPHAGFHYLYREHDIRLIESHQ 253

Query: 133 DLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
            LV+GFLR+A +M+ +NGE H+THKTA+PFD+W+IE+LAE+VGL L
Sbjct: 254 KLVKGFLRSANDMLSKNGEAHVTHKTAHPFDRWEIEKLAEDVGLCL 299

[Close]

BLAST of Spg017778 vs. ExPASy TrEMBL
Match: A0A5D3DIB6 (DUF2431 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002400 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54
Identity = 112/163 (68.71%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 17  KTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKV 76
           K+IKHY+SS +ILLVGEG+FSFSACLA AF SA+N+ ATSLDS + L+ KYTH   NLK+
Sbjct: 7   KSIKHYSSSHKILLVGEGDFSFSACLATAFASASNIVATSLDSPDELVMKYTHANRNLKI 66

Query: 77  LEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVR 136
           LEELG  V+H+V+ATTMSQHPLL    FDRIVFNFPHAG  FLY E +  QIELHRDLVR
Sbjct: 67  LEELGGRVLHKVDATTMSQHPLLYDMLFDRIVFNFPHAG--FLYGECNTAQIELHRDLVR 126

Query: 137 GFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQ 180
           GFLRNAK M+ ++GEIHITHKT++PF KW+I +LA   GL L+
Sbjct: 127 GFLRNAKRMISKDGEIHITHKTSHPFSKWEIVKLASGEGLALK 167

[Close]

BLAST of Spg017778 vs. ExPASy TrEMBL
Match: V4UII5 (DUF2431 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10010347mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54
Identity = 118/210 (56.19%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 8   ELFRSEAEI----KTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESL 67
           E+F+ + E+    K I+HY+S  +ILLVGEG+FSF+AC AK+FGSA N  ATSLDSKE L
Sbjct: 3   EIFKLDNELGESEKWIQHYSSHHKILLVGEGDFSFAACSAKSFGSADNKVATSLDSKELL 62

Query: 68  LRKYTHVATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREH 127
           + KY+  A+NLK LEE GCT++HEV+A TMSQHP+L  +SFDRIVFNFPHAGF F YREH
Sbjct: 63  MAKYSRAASNLKELEESGCTILHEVDAHTMSQHPMLYSKSFDRIVFNFPHAGFHFNYREH 122

Query: 128 DIEQIELHRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQVVSQ 187
           D+  I+ H++LVRGFL++A  M+ ENGEIH+THKTA PF++W+IE L   VG  L++V +
Sbjct: 123 DLFLIQRHQELVRGFLKSAMNMLKENGEIHVTHKTAYPFNRWEIEMLG--VGFGLRLVEK 182

Query: 188 S-----HTPGVAMSGGILGCRTKKVVSLGV 209
                 H PG     G  G R  +   +GV
Sbjct: 183 VPFYLWHYPGYQNKRGD-GSRCDESFPVGV 209

[Close]

BLAST of Spg017778 vs. ExPASy TrEMBL
Match: A0A1S3BIC4 (uncharacterized protein At4g26485-like OS=Cucumis melo OX=3656 GN=LOC103490386 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54
Identity = 112/163 (68.71%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 17  KTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKV 76
           K+IKHY+SS +ILLVGEG+FSFSACLA AF SA+N+ ATSLDS + L+ KYTH   NLK+
Sbjct: 7   KSIKHYSSSHKILLVGEGDFSFSACLATAFASASNIVATSLDSPDELVMKYTHANRNLKI 66

Query: 77  LEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVR 136
           LEELG  V+H+V+ATTMSQHPLL    FDRIVFNFPHAG  FLY E +  QIELHRDLVR
Sbjct: 67  LEELGGRVLHKVDATTMSQHPLLYDMLFDRIVFNFPHAG--FLYGECNTAQIELHRDLVR 126

Query: 137 GFLRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPLQ 180
           GFLRNAK M+ ++GEIHITHKT++PF KW+I +LA   GL L+
Sbjct: 127 GFLRNAKRMISKDGEIHITHKTSHPFSKWEIVKLASGEGLALK 167

[Close]

BLAST of Spg017778 vs. TAIR 10
Match: AT1G55790.1 (Domain of unknown function (DUF2431) )

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 19  IKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLE 78
           +KHY+S+ +ILLVGEG+FSFS  LA  FGSA+N+ A+SLDS + ++RKY    +NLK L+
Sbjct: 21  VKHYSSNHQILLVGEGDFSFSHSLATLFGSASNICASSLDSYDVVVRKYKKARSNLKTLK 80

Query: 79  ELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGF 138
            LG  ++H V+ATT+  HP LRY  FDR++FNFPHAGF    RE D   I  HR+LV GF
Sbjct: 81  RLGALLLHGVDATTLHFHPDLRYRRFDRVIFNFPHAGFH--GRESDSSLIRKHRELVFGF 140

Query: 139 LRNAKEMVGENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
              A  ++  NGE+H++HK   PF +W +EELA    L L
Sbjct: 141 FNGASRLLRANGEVHVSHKNKAPFSEWNLEELASRCFLVL 178

[Close]

BLAST of Spg017778 vs. TAIR 10
Match: AT5G56060.1 (Domain of unknown function (DUF2431) )

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40
Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 19  IKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNLKVLE 78
           ++ Y++ Q+ILLVGEG+FSFS  LA+ FGSA N+ ATSLD++E L  KYT    N++ LE
Sbjct: 9   LQQYSNKQKILLVGEGDFSFSLSLARVFGSATNITATSLDTREELGIKYTDGKANVEGLE 68

Query: 79  ELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDLVRGF 138
             GCTVVH VN  +MS     R   +DRI+FNFPH+G  F   EHDI  I LH+ LVRGF
Sbjct: 69  LFGCTVVHGVNVHSMSSD--YRLGRYDRIIFNFPHSGLGF-GSEHDIFFIMLHQGLVRGF 128

Query: 139 LRNAKEMV-GENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
           L +A++M+  E+GEIH+THKT +PF++W IE LA E GL L
Sbjct: 129 LESARKMLKDEDGEIHVTHKTTDPFNRWGIETLAGEKGLRL 166

[Close]

BLAST of Spg017778 vs. TAIR 10
Match: AT4G26485.1 (Domain of unknown function (DUF2431) )

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 77/160 (48.12%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 51  NMFATSLDSKESLLRKYTHVATNLKVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFN 110
           N+ ATSLDS++ L  KY     N+ +L+  GC + HEV+  TMS    L  + +DRIVFN
Sbjct: 2   NITATSLDSEDELSIKYMDAVDNINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFN 61

Query: 111 FPHAGFRFLYREHDIEQIELHRDLVRGFLRNAKEMVGENGEIHITHKTANPFDKWKIEEL 170
           FPHAG RF  RE     IE H++LVRGFL NAKEM+ E+GEIHITHKT  PF  W I++L
Sbjct: 62  FPHAGSRFFGRELSSRAIESHKELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKL 121

Query: 171 AEEVGLPLQVVSQ---SHTPGVAMSGGILGCRTKKVVSLG 208
            +  GL L   S+   SH PG     G  G R+     +G
Sbjct: 122 GKGEGLKLLKKSKFELSHYPGYITKRGSGGRRSDDYFPVG 161

[Close]

BLAST of Spg017778 vs. TAIR 10
Match: AT5G56075.1 (Domain of unknown function (DUF2431) )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 77/188 (40.96%), Postives = 114/188 (60.64%), Query Frame = 0


Query: 8   ELFRSEAEIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKY 67
           E+  +  E K ++HY + Q+ILLVGEG+FSFS  LA+AFGSA+N+ ATSLD++  L +K+
Sbjct: 56  EMQTNVQETKRLRHYTNKQKILLVGEGDFSFSLSLARAFGSASNLTATSLDTQGELEQKF 115

Query: 68  THVATNLKVLEELGCTVVHEVNATTMSQHPLLRYES-FDRIVFNFPHAGFRFLYREHDIE 127
            +   N++ LE LGC+VV+ VN  +M   P +   + +DR++FNFP              
Sbjct: 116 KNGKANVEELERLGCSVVYGVNVHSMITKPSVGGSAIYDRVIFNFP-------------- 175

Query: 128 QIELHRDLVRGFLRNAKEMV---GENGEIHITHKTANPFDKWKIEELAEEVGLPL---QV 187
                 +LVRGF+++A+ +V    + GEIH+ HKT  PF +WK++ L E+ GL L     
Sbjct: 176 ----THELVRGFMKSARVLVKDEDKGGEIHVIHKTEYPFSEWKLKTLGEKEGLDLIREVE 225

Query: 188 VSQSHTPG 189
              SH PG
Sbjct: 236 FCLSHYPG 225

[Close]

BLAST of Spg017778 vs. TAIR 10
Match: AT5G25030.1 (Domain of unknown function (DUF2431) )

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 15  EIKTIKHYNSSQRILLVGEGNFSFSACLAKAFGSAANMFATSLDSKESLLRKYTHVATNL 74
           E K +  Y++ Q+IL+VGEG FSFS  LAKA GSA N+ A SLD +E L R Y +   N+
Sbjct: 5   ESKRLSRYSNEQKILVVGEGEFSFSLSLAKALGSATNITAISLDIREDLGRNYNNGKGNV 64

Query: 75  KVLEELGCTVVHEVNATTMSQHPLLRYESFDRIVFNFPHAGFRFLYREHDIEQIELHRDL 134
           + LE LGCTVV  VN  +M     L +  +D I+FNFPHAG R                +
Sbjct: 65  EELERLGCTVVRGVNVHSMKSDDRLAH--YDIIIFNFPHAGKR--------------NKV 124

Query: 135 VRGFLRNAKEMV-GENGEIHITHKTANPFDKWKIEELAEEVGLPL 179
             GF+ +A+EM+  E+GEIHIT  T NPF+KW ++ LAEE GL L
Sbjct: 125 FGGFMESAREMMKDEDGEIHITLNTLNPFNKWDLKALAEESGLRL 153

The following BLAST results are available for this feature:

BLAST of Spg017778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139691.1	2.4e-63	72.63	uncharacterized protein At4g26485-like [Momordica charantia]	[more]
XP_024463418.1	5.8e-57	66.87	uncharacterized protein At4g26485 [Populus trichocarpa] >PNT59872.1 hypothetical...	[more]
XP_028789160.1	4.2e-55	66.27	uncharacterized protein At4g26485-like [Prosopis alba]	[more]
XP_028771540.1	4.2e-55	65.48	uncharacterized protein At4g26485-like [Prosopis alba]	[more]
XP_017979628.1	9.3e-55	66.27	PREDICTED: uncharacterized protein At4g26485 [Theobroma cacao]	[more]

BLAST of Spg017778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8L4	2.6e-47	52.02	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 P...	[more]
F4I1X0	1.8e-40	51.88	Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX...	[more]
O94480	1.6e-17	34.19	25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 9...	[more]
Q9BRP7	1.1e-10	30.54	Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens OX...	[more]
Q3UY23	1.9e-10	30.22	Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus mus...	[more]

BLAST of Spg017778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDH1	1.2e-63	72.63	uncharacterized protein At4g26485-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2K2CCX1	2.8e-57	66.87	DUF2431 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G43...	[more]
A0A5D3DIB6	6.5e-54	68.71	DUF2431 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
V4UII5	6.5e-54	56.19	DUF2431 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v100103...	[more]
A0A1S3BIC4	6.5e-54	68.71	uncharacterized protein At4g26485-like OS=Cucumis melo OX=3656 GN=LOC103490386 P...	[more]

BLAST of Spg017778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55790.1	1.3e-41	51.88	Domain of unknown function (DUF2431)	[more]
AT5G56060.1	2.4e-40	55.28	Domain of unknown function (DUF2431)	[more]
AT4G26485.1	1.3e-33	48.13	Domain of unknown function (DUF2431)	[more]
AT5G56075.1	1.2e-31	40.96	Domain of unknown function (DUF2431)	[more]
AT5G25030.1	1.5e-31	47.27	Domain of unknown function (DUF2431)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019446	Domain of unknown function DUF2431	PFAM	PF10354	DUF2431	coord: 29..179 e-value: 7.8E-44 score: 149.9
None	No IPR available	PANTHER	PTHR11538:SF89	BNAA01G35280D PROTEIN	coord: 14..179
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 14..179
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 37..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017778.1	Spg017778.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity