Spg017590 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAACTTAAATCTTTCATTAAAATTTAAAAATAAATAAATGGCACATCAATGCTTAGAATAAGACACCAGTCAGACGTTTTCACCGGCGCTGCAATGGCCGCTTCAGAGCTCGAAGTTGCAGTCTTTATCGATACTGATTTCGGCACTCGCCTGGCCGTCGCCGTTCCGCCGTATATCGCTGCCGGAGCTTTGAAGAGTGAGCCGAAATATACTATTGAAAAACATCTGCACTTCACTTTTCCTCTTTCTTTTGTCTCCGATTAGAACTAAACTCATTTGTTTATGGGGTTTTTTATTTCTCTCTTTGGCTGGAGAAAAAACCCCATTTCTGGAGATTTTTCAATCTCTTTGGGGATTTTGACGTTTCATCTTTCTGGGTTTCAAAAGAGCTTCCTTAAATGCTTTTAGGTTTCTGTTTGTGCTTTGTTCAGATTCTGGGTTCTTCACCATTTTTCTGAAATGATGAGATTTCTGCTGCTTGGTTTCCAATGGAAGTTGCACTGATTTTACATTTTGTCTGTTCATTATGAATCTCTAGGGTTGTTTAAGGAATTGTTGAAAGAAGTTTAAAGGATTGAATTGGATGATGTCACTTGATTCCCTGATACAATCCTCTCCTATTATGAGATGTTTCAAGAGCTCATTTGCACCTTATTATGTTCACTTTCTCTTTTGCTTTGTGCTTGAGGATGTGATTTCTAAGGGTCTTTATTTGTCTAATGTCCCTGTTTCTAAAGACTTTATTGATCATCCTTTGTCTTTCATCCTTTTGAATGAGAGCTCTTTCTCACAGCTCTCTTACAATCATGGTCGGTAAAGCTCCGTTTGATAACCATTTTGTTTTTGGCTTACTGTTTCGAAAATTGAGCTTTTAAACACTACTTTAACATATAGTTTTGTTGCTTTATCACCTACTTTTTAAAACACTTTAAAAAACCAAGCCAAATTTTTTAAAACTAAAAAAAGGTAGTTTTTAGAAACTTGATTTAGTTTTTAAATTTGGCTTAGAATTCAAATGTGTTTCTAAGGAAGGTGAAAAGTTTACCAAAAAATTGTGAGGAAACATGCATAATTTTAAAAAACAAAATAGTTATCAAACGGAGACTTAGCTTTTTGCGTTTTTGGTTTGACTTCTTGTGTCTTGTGCTTTTCTTTTTATATTTCCCTAGATACAATGAAAGTTGGTTTTTTCTCGAAAAAAGAAAAGGTGAATTCTAAGATATGGCTCATCCTTTTAATAAGGATGGATAAGTATGAAGTTTGGAGTTTAGAAGATTGGTTTGGGATTTGTGTAATGTGTTTAGTTTGTAAGGTTATATGATTTGTTGAAGTTAATATGTAGTACAAAGGGTGAGTTTCATGAACTTTGATTTTGTGTAACATGGACTTATATAGCTTGAGGAATTAATAAATCCATGTTGTGAGATAAGCAATCCATGTTCCAAATATAAGTTTAAATTACATAAGCTTAACCTATAAGCCAAATATTCTCGGAATGATTTAGCGTTCGTTTTTGCACTCGGACTCTCAAACTTGATGCCTAGAGTTCAATGTTTTATGCCATATCATTTGGGCTAAAGTTATGTGCATAATGTGTATATTGTCTTTATTGTTTAATCTGCTGATTGCAAAACTTTTTCCAGGGGAAGTTGAGAGAGTACATTTGAACTGTTTCCCAAATGTAGGAGAGATCAAGGTGGATGGATTCATGGTGTGTTTGTAGATGGTTTTCATTTGTTGTCATGTTTCAGCATCAGGTTTCAGATCTTGTTCTAATTTGTACCATTTCCTTTCCATTAGGTGAAGCAAAACTCAAACTTCTACCATTTGTCTGACACGTTGCTCCCGAAACTCACTTCCCGGGTGGAAGTTGTGCAGTTTCTTCATGTCAAAGCACGACCTTTGAATGAGTTTACTGAGCTTCGTTCACCCGACAATGCCGATTGTTTCCCCGACATAAACAACCTCACTGACCCTTCGGAAAGACGAGGCTACTCTAGAAGTGCCTGCAAGAGTAAAATCAGAATCGATGACAAGAAACATACGAGAAAAAGATTCAAAACCAAGAATTACTTATCAAGATTAGGCTGCAGAAGCATCTTAGCTTGGTATACAAGGAGAAAGAGGAAGAGAAGCAACAAAAATCAGCTTTTAGAGCATGTGGTAAAGAACTCCGTTATCGAGGATCCAATCAAAGATGCAGAAAATCTCGGTGGCTCGATCGATACATCTTCATACCATTTTGTGCCAAATGATGAAGTTAGGATCACAAAACAAAGGTATGCTTATGCAAGCTCCTCATTGGCAGAGGCAGCCACAGCCAGTGACTTATCATCTGAAGTCATGTCTGTTTCAAATATCATTAAAAGATATTTTTCGAGCCACGACGAAGTGAGCAGCGTTCCAAATCGATTGAGCTGTGGCATTACTCAGAGTTGGCCACAAGAGTGTTTGGAGAAGAAGAAGAAGAATATGGAAAGAGGCCCAAGCTTGTTGCCTTTGAAATTTCCATTTAAAACAGGTTGTCAAAAGCCTAAGAGATCTAAACTTGGGAAAAGGCTGGTAATGGCTTCATATAATCTTGGGATTTCTCCCAACAGAGAAAGGCCAGAAATTTCACTATGCAATTCTAGAGGTAAAAAGTTTCAAGAACTCGTGTCTTTGGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGAGATTAACTATTAGATTTCTTTGTTGCCACAACAAGTAGATAGCAATATTATGATAAATGTTTTAGGTTTTGCTTGCTGATCTTGGATTGGATGAAGCTTCTTTTGTTTTAACTTCTCTTAGCTTTGGCTTAATGTTTTATTATTACAATTTTTAGTTCAACAACATTCAGGGTGGGAATTGAAACCT ATGCTTAGAATAAGACACCAGTCAGACGTTTTCACCGGCGCTGCAATGGCCGCTTCAGAGCTCGAAGTTGCAGTCTTTATCGATACTGATTTCGGCACTCGCCTGGCCGTCGCCGTTCCGCCGTATATCGCTGCCGGAGCTTTGAAGAGGGAAGTTGAGAGAGTACATTTGAACTGTTTCCCAAATGTAGGAGAGATCAAGGTGGATGGATTCATGGTGAAGCAAAACTCAAACTTCTACCATTTGTCTGACACGTTGCTCCCGAAACTCACTTCCCGGGTGGAAGTTGTGCAGTTTCTTCATGTCAAAGCACGACCTTTGAATGAGTTTACTGAGCTTCGTTCACCCGACAATGCCGATTGTTTCCCCGACATAAACAACCTCACTGACCCTTCGGAAAGACGAGGCTACTCTAGAAGTGCCTGCAAGAGTAAAATCAGAATCGATGACAAGAAACATACGAGAAAAAGATTCAAAACCAAGAATTACTTATCAAGATTAGGCTGCAGAAGCATCTTAGCTTGGTATACAAGGAGAAAGAGGAAGAGAAGCAACAAAAATCAGCTTTTAGAGCATGTGGTAAAGAACTCCGTTATCGAGGATCCAATCAAAGATGCAGAAAATCTCGGTGGCTCGATCGATACATCTTCATACCATTTTGTGCCAAATGATGAAGTTAGGATCACAAAACAAAGGTATGCTTATGCAAGCTCCTCATTGGCAGAGGCAGCCACAGCCAGTGACTTATCATCTGAAGTCATGTCTGTTTCAAATATCATTAAAAGATATTTTTCGAGCCACGACGAAGTGAGCAGCGTTCCAAATCGATTGAGCTGTGGCATTACTCAGAGTTGGCCACAAGAGTGTTTGGAGAAGAAGAAGAAGAATATGGAAAGAGGCCCAAGCTTGTTGCCTTTGAAATTTCCATTTAAAACAGGTTGTCAAAAGCCTAAGAGATCTAAACTTGGGAAAAGGCTGGTAATGGCTTCATATAATCTTGGGATTTCTCCCAACAGAGAAAGGCCAGAAATTTCACTATGCAATTCTAGAGGTAAAAAGTTTCAAGAACTCGTGTCTTTGGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGA ATGCTTAGAATAAGACACCAGTCAGACGTTTTCACCGGCGCTGCAATGGCCGCTTCAGAGCTCGAAGTTGCAGTCTTTATCGATACTGATTTCGGCACTCGCCTGGCCGTCGCCGTTCCGCCGTATATCGCTGCCGGAGCTTTGAAGAGGGAAGTTGAGAGAGTACATTTGAACTGTTTCCCAAATGTAGGAGAGATCAAGGTGGATGGATTCATGGTGAAGCAAAACTCAAACTTCTACCATTTGTCTGACACGTTGCTCCCGAAACTCACTTCCCGGGTGGAAGTTGTGCAGTTTCTTCATGTCAAAGCACGACCTTTGAATGAGTTTACTGAGCTTCGTTCACCCGACAATGCCGATTGTTTCCCCGACATAAACAACCTCACTGACCCTTCGGAAAGACGAGGCTACTCTAGAAGTGCCTGCAAGAGTAAAATCAGAATCGATGACAAGAAACATACGAGAAAAAGATTCAAAACCAAGAATTACTTATCAAGATTAGGCTGCAGAAGCATCTTAGCTTGGTATACAAGGAGAAAGAGGAAGAGAAGCAACAAAAATCAGCTTTTAGAGCATGTGGTAAAGAACTCCGTTATCGAGGATCCAATCAAAGATGCAGAAAATCTCGGTGGCTCGATCGATACATCTTCATACCATTTTGTGCCAAATGATGAAGTTAGGATCACAAAACAAAGGTATGCTTATGCAAGCTCCTCATTGGCAGAGGCAGCCACAGCCAGTGACTTATCATCTGAAGTCATGTCTGTTTCAAATATCATTAAAAGATATTTTTCGAGCCACGACGAAGTGAGCAGCGTTCCAAATCGATTGAGCTGTGGCATTACTCAGAGTTGGCCACAAGAGTGTTTGGAGAAGAAGAAGAAGAATATGGAAAGAGGCCCAAGCTTGTTGCCTTTGAAATTTCCATTTAAAACAGGTTGTCAAAAGCCTAAGAGATCTAAACTTGGGAAAAGGCTGGTAATGGCTTCATATAATCTTGGGATTTCTCCCAACAGAGAAAGGCCAGAAATTTCACTATGCAATTCTAGAGGTAAAAAGTTTCAAGAACTCGTGTCTTTGGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGA MLRIRHQSDVFTGAAMAASELEVAVFIDTDFGTRLAVAVPPYIAAGALKREVERVHLNCFPNVGEIKVDGFMVKQNSNFYHLSDTLLPKLTSRVEVVQFLHVKARPLNEFTELRSPDNADCFPDINNLTDPSERRGYSRSACKSKIRIDDKKHTRKRFKTKNYLSRLGCRSILAWYTRRKRKRSNKNQLLEHVVKNSVIEDPIKDAENLGGSIDTSSYHFVPNDEVRITKQRYAYASSSLAEAATASDLSSEVMSVSNIIKRYFSSHDEVSSVPNRLSCGITQSWPQECLEKKKKNMERGPSLLPLKFPFKTGCQKPKRSKLGKRLVMASYNLGISPNRERPEISLCNSRGKKFQELVSLAKSSCFEISDSED Homology
BLAST of Spg017590 vs. NCBI nr
Match: XP_038899156.1 (uncharacterized protein LOC120086530 isoform X1 [Benincasa hispida]) HSP 1 Score: 505.8 bits (1301), Expect = 3.3e-139 Identity = 275/360 (76.39%), Postives = 303/360 (84.17%), Query Frame = 0
BLAST of Spg017590 vs. NCBI nr
Match: XP_008463010.1 (PREDICTED: uncharacterized protein LOC103501255 isoform X2 [Cucumis melo] >KAA0048285.1 uncharacterized protein E6C27_scaffold63G002120 [Cucumis melo var. makuwa]) HSP 1 Score: 488.8 bits (1257), Expect = 4.2e-134 Identity = 264/358 (73.74%), Postives = 295/358 (82.40%), Query Frame = 0
BLAST of Spg017590 vs. NCBI nr
Match: XP_023523478.1 (uncharacterized protein LOC111787684 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.1 bits (1237), Expect = 8.7e-132 Identity = 266/359 (74.09%), Postives = 287/359 (79.94%), Query Frame = 0
BLAST of Spg017590 vs. NCBI nr
Match: TYK07976.1 (uncharacterized protein E5676_scaffold265G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 472.6 bits (1215), Expect = 3.1e-129 Identity = 264/389 (67.87%), Postives = 295/389 (75.84%), Query Frame = 0
BLAST of Spg017590 vs. NCBI nr
Match: XP_022139432.1 (uncharacterized protein LOC111010366 isoform X2 [Momordica charantia]) HSP 1 Score: 471.9 bits (1213), Expect = 5.3e-129 Identity = 249/357 (69.75%), Postives = 287/357 (80.39%), Query Frame = 0
BLAST of Spg017590 vs. ExPASy TrEMBL
Match: A0A5A7U3R6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002120 PE=4 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 2.0e-134 Identity = 264/358 (73.74%), Postives = 295/358 (82.40%), Query Frame = 0
BLAST of Spg017590 vs. ExPASy TrEMBL
Match: A0A1S3CI86 (uncharacterized protein LOC103501255 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501255 PE=4 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 2.0e-134 Identity = 264/358 (73.74%), Postives = 295/358 (82.40%), Query Frame = 0
BLAST of Spg017590 vs. ExPASy TrEMBL
Match: A0A5D3CC82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001070 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.5e-129 Identity = 264/389 (67.87%), Postives = 295/389 (75.84%), Query Frame = 0
BLAST of Spg017590 vs. ExPASy TrEMBL
Match: A0A6J1CDX9 (uncharacterized protein LOC111010366 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010366 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 2.5e-129 Identity = 249/357 (69.75%), Postives = 287/357 (80.39%), Query Frame = 0
BLAST of Spg017590 vs. ExPASy TrEMBL
Match: A0A6J1FPV9 (uncharacterized protein LOC111445895 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445895 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 2.5e-129 Identity = 263/359 (73.26%), Postives = 286/359 (79.67%), Query Frame = 0
BLAST of Spg017590 vs. TAIR 10
Match: AT1G55860.1 (ubiquitin-protein ligase 1 ) HSP 1 Score: 73.2 bits (178), Expect = 5.1e-13 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Spg017590 vs. TAIR 10
Match: AT4G00920.1 (COP1-interacting protein-related ) HSP 1 Score: 50.1 bits (118), Expect = 4.6e-06 Identity = 31/99 (31.31%), Postives = 46/99 (46.46%), Query Frame = 0
BLAST of Spg017590 vs. TAIR 10
Match: AT2G01800.1 (COP1-interacting protein-related ) HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05 Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of Spg017590 vs. TAIR 10
Match: AT2G01800.2 (COP1-interacting protein-related ) HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05 Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of Spg017590 vs. TAIR 10
Match: AT2G01800.3 (COP1-interacting protein-related ) HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05 Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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