Spg017385 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017385
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor IBH1-like 1
Locationscaffold4: 42674531 .. 42676758 (-)
RNA-Seq ExpressionSpg017385
SyntenySpg017385
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAACCCCAACAAGCTCAAACAAAAATTTCTCAAGAAATGGCTTGTGGGTCTACAAGCCATCACCTCTTCAAGCACAAACATGGACTTGTTAGAGAGAAAGAAAGCCATAAAAATGTCTGCCGACTTTGCCATGGCTGCGACCAGAAACGGCGCGACTTTCTGGAGTCGTGCCATCATCGCCGAATCCATGAAAGGCCGTGCAGGCCAAGCTCCATCTCGGGCCATCTCGAATAGTCGAACCATTCACACGAAGCTTCGAAGGAAGACGACGACGCTGCGAAAGATACGTCGGGCGAGGAGTCGCTTGCCTCCGACGAAGTCGTTAGCGAGCTCAGTGTTATGACGAAAACAGTAACAACGTAACAAGAACGAAAGGGCGAAGAGAAACAACACACAGATATACGTGGTTCACTAACAGTGTGTTAGCTACGTCCACGGGCAGAGGGAGAGAACGATCTTATTATGTGAGGAGTATTCAGAATACAGAGAGATTAGGGCAAAGAATAGGTTAAGAGGGTTTATATATGGCACCACTCTTAACCCTAACATAATAGGCCCAAAATAAAAGCCCAAAACGGAAATATCACATCTAATCCCTATACATAATTTAGCTTAGGGGGCGTTGCCCCCGAACCCCCACCGGGCGCTTCGCCCCTGGACCCCGACTCGCTGACCGGGCAGCGAGACCCCCGTACTGGGTCGTTCGGAGCGCTTCATATCAGATTCAAGGCATATCAACAAATCTCCACCTTGACTTGAACTCTCTCACACATAACAGATGAACCAGATGTACCCAAAGAAAAGTACCAGATGCAACTTAAAAAAAGTCACCAGATTCTCCCTCTGCTTCATAAGGTCCCCTAGGGACCACTTAGCAATTCAGAACATTTAGCAAGTCCAAACAATGTTGGAACTTGCCACTTGGGACTGCCTTGGTGAAAATATCAGCGGGGTTATCAGCTGTCCCAACTTTCATCACCTTAATCCTCTTCTCATCTCTCAGGAAATGATATCTAACATCTATATGTTTAGTCCTCTCATGATGAACTTGATCCTTGGCTAAGCATATTGCACTCAAACTATCACAATATACAACAGCCTGATCATGATGAAGACCAAGGTCACCAACTAGTCCTTTCAACCATATTGCTTCTTTAGCAGCTTCTGTTAGTGCCATATACTCAGCCTCAGTAGTAGACAAAGTAACTGTAGGCTGTAGGGTTGCCTTCCAACTAACAACAGAACCACCAAGGGTAAACACATAACCAGTCATGGACCTTCTACTGTCAACATCCCCAGCATAGTCAGAATCAGAATAACCAGTCACTAAACATTCTGTATCACCTCCATAAAGGCCTTCTTCGTACCAGACAGCGGCGCCCATAATCCCTGCTGCTTTAGCAGAGATCGCATCTTGATCTGCCACAGACCAAAACTGTTCCTCCCGGTGAATTTGTCGATCTTCACGTTCATAGCTGACATCCTTGTACGCTTGAAAAACTGTTGCGGAAAAACACGAAACCGAGGCTCTGATACCACTTGTTAAGGACGAGGACACGACACAGATCTCCACAATGGTATGATATTGTCCACTTTGGGCATAAGCCCTCATGGCTTTGCTTTTGGTTCCACCCAAAAGGCCTCATACCAATGGAGATACTTGTCCTCCCTTATAAACCCATGATCATCCCCTTATCTAGCCAATGTGGGACTTTGGTTGCACTCCCAATTCCCAACAATCCTCCCCTCGAACAAAGTACCACAGACGAGCCTCCCTTCAAATAGTCATCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGGGGATTCTACCGACATGGCTAA

mRNA sequence

ATGCCCAACCCCAACAAGCTCAAACAAAAATTTCTCAAGAAATGGCTTGTGGGTCTACAAGCCATCACCTCTTCAAGCACAAACATGGACTTGTTAGAGAGAAAGAAAGCCATAAAAATGTCTGCCGACTTTGCCATGGCTGCGACCAGAAACGGCGCGACTTTCTGGAGTCGTGCCATCATCGCCGAATCCATGAAAGGCCGTGCAGGCCAAGCTCCATCTCGGGCCATCTCGAATAGTCGAACCATTCACACGAAGCTTCGAAGGAAGACGACGACGCTGCGAAAGATACAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGGGGATTCTACCGACATGGCTAA

Coding sequence (CDS)

ATGCCCAACCCCAACAAGCTCAAACAAAAATTTCTCAAGAAATGGCTTGTGGGTCTACAAGCCATCACCTCTTCAAGCACAAACATGGACTTGTTAGAGAGAAAGAAAGCCATAAAAATGTCTGCCGACTTTGCCATGGCTGCGACCAGAAACGGCGCGACTTTCTGGAGTCGTGCCATCATCGCCGAATCCATGAAAGGCCGTGCAGGCCAAGCTCCATCTCGGGCCATCTCGAATAGTCGAACCATTCACACGAAGCTTCGAAGGAAGACGACGACGCTGCGAAAGATACAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCTATCAGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTTGCTCTTAGAGCCAGATTACGGATTCTATCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGTCAGATTACGGATTCATTCCGTCCATATCTCCTTTCATAGGGAGGAGTTTGCTCTTAGAGCCAGATTACGGATTCTACATATGAATATTTCTTCAAGGCTAACAAATTCTTTGTTCAACACTCGGGGATTCTACCGACATGGCTAA

Protein sequence

MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAIIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQPDYGFYPSISPFIGRSLLLESDYGFYQSISPFIGRSLLLESDYGFIPSISPFIGRSFALRARLRILSVHISFHREEFALRVRLRIHSVHISFHREEFALRARLRILHMNISSRLTNSLFNTRGFYRHG
Homology
[Close]
BLAST of Spg017385 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 7.1e-28
Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNPNKLKQ+FLKKWLVGL++ TSS+TNM++LERKKAIKMSAD+AMAATRNG+T WSRAI
Sbjct: 1  MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRK---TTTLRKI 98
          IA+S+K   GQAP  AISN +TI+ KL+RK   TTTL K+
Sbjct: 61 IAKSIK---GQAPLEAISNRQTIYAKLQRKKMTTTTLWKM 97

[Close]
BLAST of Spg017385 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-23
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNPNKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++I
Sbjct: 1  MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IA+S+K   G AP  AI N RT +  L RK  T+ +++
Sbjct: 61 IAKSLK---GHAPPEAILNRRTSYINLLRKKRTMTQLR 95

[Close]
BLAST of Spg017385 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-22
Identity = 62/99 (62.63%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRA 60
          MPNPNKLKQ+FLKKWLVGL++ TSSS TNM+ L+RKKAIK+SAD+AMA TR G T WS++
Sbjct: 1  MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61 IIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IIA+S+K   G AP +AI N  TI+  L RK  T+ ++Q
Sbjct: 61 IIAKSLK---GHAPPKAILNRGTIYINLLRKKRTMTQLQ 96

[Close]
BLAST of Spg017385 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-21
Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPN NKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++I
Sbjct: 1  MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IA+ +K   G AP  AI N RT +  L RK  T+ +++
Sbjct: 61 IAKYLK---GHAPPEAILNRRTSYINLLRKKRTMTQLR 95

[Close]
BLAST of Spg017385 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 5.1e-18
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNPNKLKQ+FL+KW V L+  T+S+T MD+ ERKKAIKMSAD AMA+ RNG T WSRAI
Sbjct: 1  MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL 95
          IA+SMK R    P+  +  S  +H    +KL RK TT+
Sbjct: 61 IAKSMKDR---VPAEIVL-SHPVHGVKLSKLGRKKTTM 94

[Close]
BLAST of Spg017385 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+
Sbjct: 1  MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61 IAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI 98
          I ++        +     I     I+ KL +KT   RKI
Sbjct: 61 IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKI 99

[Close]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.7e-24
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNPNKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++I
Sbjct: 1  MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IA+S+K   G AP  AI N RT +  L RK  T+ +++
Sbjct: 61 IAKSLK---GHAPPEAILNRRTSYINLLRKKRTMTQLR 95

[Close]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-22
Identity = 62/99 (62.63%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSS-TNMDLLERKKAIKMSADFAMAATRNGATFWSRA 60
          MPNPNKLKQ+FLKKWLVGL++ TSSS TNM+ L+RKKAIK+SAD+AMA TR G T WS++
Sbjct: 1  MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61 IIAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IIA+S+K   G AP +AI N  TI+  L RK  T+ ++Q
Sbjct: 61 IIAKSLK---GHAPPKAILNRGTIYINLLRKKRTMTQLQ 96

[Close]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.3e-22
Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPN NKLKQ+FLK WLVGLQ+ TSS+TNM+ L+RKKAIK+SAD+AMAATRNG T WS++I
Sbjct: 1  MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKIQ 99
          IA+ +K   G AP  AI N RT +  L RK  T+ +++
Sbjct: 61 IAKYLK---GHAPPEAILNRRTSYINLLRKKRTMTQLR 95

[Close]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNPNKLKQ+FL+KW V L+  T+S+T MD+ ERKKAIKMSAD AMA+ RNG T WSRAI
Sbjct: 1  MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIH----TKLRRKTTTL 95
          IA+SMK R    P+  +  S  +H    +KL RK TT+
Sbjct: 61 IAKSMKDR---VPAEIVL-SHPVHGVKLSKLGRKKTTM 94

[Close]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match: A0A6J1HLT3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.9e-17
Identity = 60/97 (61.86%), Postives = 69/97 (71.13%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          MPNP  LK+ FLKKW++GL  IT S+T M+ LERKKAIK S+D AMAATRNGAT WSRAI
Sbjct: 1  MPNPINLKRIFLKKWIMGLNPITFSNTTMNFLERKKAIKASSDLAMAATRNGATRWSRAI 60

Query: 61 IAESMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI 98
          IA+S+     QAP+ A         KLRRK TTL KI
Sbjct: 61 IAKSI-----QAPTEA---------KLRRK-TTLHKI 82

[Close]
BLAST of Spg017385 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+
Sbjct: 1  MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61 IAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI 98
          I ++        +     I     I+ KL +KT   RKI
Sbjct: 61 IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKI 99

[Close]
BLAST of Spg017385 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 1  MPNPNKLKQKFLKKWLVGLQAITSSSTNMDLLERKKAIKMSADFAMAATRNGATFWSRAI 60
          M   + + ++FLKKW +GLQ    S  N  + ERKKAIK+SAD AMA+ R G T WSRA+
Sbjct: 1  MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61 IAESM--KGRAGQAPSRAISNSRTIHTKLRRKTTTLRKI 98
          I ++        +     I     I+ KL +KT   RKI
Sbjct: 61 IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKI 99

[Close]
BLAST of Spg017385 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 5  NKLKQKFLKKWLVGLQAITSSSTN-MDLLERKKAIKMSADFAMAATRNGATFWSRAIIAE 64
          N +KQ+F+KKW+  L  + SS  + +++ ERK AI++S+D AMAA RNG+T WSRA+I+ 
Sbjct: 6  NMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRALISR 65

Query: 65 SMKGRAGQAPSRAISNSRTIHTKLRRKTTTLRK 97
          S    A +  +R I   +    +++ +   LR+
Sbjct: 66 SGNKTANKPMARRI--LKKARNRMKNRCNILRR 96

The following BLAST results are available for this feature:
BLAST of Spg017385 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890559.17.1e-2873.00transcription factor IBH1-like 1 [Benincasa hispida][more]
KAA0048635.11.8e-2363.27transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f... [more]
XP_004149100.17.6e-2262.63transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot... [more]
XP_008452339.11.3e-2161.22PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo][more]
XP_022153351.15.1e-1859.18transcription factor IBH1-like 1 [Momordica charantia][more]
BLAST of Spg017385 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M0B92.6e-0941.41Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV... [more]
BLAST of Spg017385 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CK758.7e-2463.27Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0LM923.7e-2262.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1[more]
A0A1S3BT016.3e-2261.22uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=... [more]
A0A6J1DKD72.5e-1859.18transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ... [more]
A0A6J1HLT37.9e-1761.86transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=... [more]
BLAST of Spg017385 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G30410.21.9e-1041.41sequence-specific DNA binding transcription factors [more]
AT4G30410.11.9e-1041.41sequence-specific DNA binding transcription factors [more]
AT5G57780.13.2e-1038.71EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044660Transcription factor IBH1-likePANTHERPTHR33124TRANSCRIPTION FACTOR IBH1-LIKE 1coord: 5..87
NoneNo IPR availablePANTHERPTHR33124:SF5TRANSCRIPTION FACTOR IBH1-LIKE 1coord: 5..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017385.1Spg017385.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000976 transcription cis-regulatory region binding