Spg017356 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017356
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	two-component response regulator ARR22-like
Location	scaffold4: 34965530 .. 34966532 (+)
RNA-Seq Expression	Spg017356
Synteny	Spg017356

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGGGAGTAGTAGGTCAAGTGGTGAGAAGAAGGTGAGGGCTTTGGTTGTGGATGATGAGGGTGTGATTAGATACATTCACATGTCTTTGTTGAAAAAGTTGAATGTTGAAGTTGAAGCAGTTGAAAATGGAAAGGCAGCAGTGAATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGTACAATTCTCTTTACCATAAATCAATTCTACATTTTCTTTTTTTTACTTAACCATTTGGGAAATATTATGCTTGTCATTGGTATCTCAACATTGGTGGTGTTTTCTAAAAGAGAAGAAAGATAAATAGAATTTTTAGTAAGAGTAAGTTTGGGATAATATTTTAGAGTAATTTTTTAAAGAAATATTACATTTTAGAGCTTGAAATGATTTTTAAGAGCTCAAGTAAAAATTTTTCTATTTAAACAACTCTTTGAAGTGCCTTTTGTTTTCAGTGTGGTTTCTGAATTTTCAAAATCTAACAAAAATTTTGAAAACTCATAACAAATTTACTTTCGAGTGTTTTTCTTTAAAAGCACTTGTCTAAGTGTTCTCCTCTAAAAGGGCAGCTTTTGAGAATTGCCAAACCCAATTAAAAATCACCCAATAAAGTAAAGTCGATAATTTTTTTTAAAAAAAATTCATAGGGTATTAATTTAGCAATTAGGAAATTAAAGTTGGAGATTCAATTGAATAGAATGAAAAGGTTAAATTTGATTGAATAATATATATATATATATAATAAAGTTGGAAAGTAGTTAAAATTAAATTGTATAATTGAAAAGGCAACAAAGGAGCTGCGAAGGATGGGAGTTGAAAGCAAGATTATTGGAGTGACAGGGCATGGGCCAAGCTCTGAGAAGAAGGCAGCCTTTATGGAGGCTGGTCTCGATGAATGCTTGACGAAGCCATTGACAACTCAAAACCTTCACTCTCTCCTCCAACAATTCAAAAAATAA

mRNA sequence

ATGGAAGGAGGGAGTAGTAGGTCAAGTGGTGAGAAGAAGGTGAGGGCTTTGGTTGTGGATGATGAGGGTGTGATTAGATACATTCACATGTCTTTGTTGAAAAAGTTGAATGTTGAAGTTGAAGCAGTTGAAAATGGAAAGGCAGCAGTGAATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGCAACAAAGGAGCTGCGAAGGATGGGAGTTGAAAGCAAGATTATTGGAGTGACAGGGCATGGGCCAAGCTCTGAGAAGAAGGCAGCCTTTATGGAGGCTGGTCTCGATGAATGCTTGACGAAGCCATTGACAACTCAAAACCTTCACTCTCTCCTCCAACAATTCAAAAAATAA

Coding sequence (CDS)

ATGGAAGGAGGGAGTAGTAGGTCAAGTGGTGAGAAGAAGGTGAGGGCTTTGGTTGTGGATGATGAGGGTGTGATTAGATACATTCACATGTCTTTGTTGAAAAAGTTGAATGTTGAAGTTGAAGCAGTTGAAAATGGAAAGGCAGCAGTGAATGCTTTCCAATGTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTCTCATGGATGGGGCTCAGGCAACAAAGGAGCTGCGAAGGATGGGAGTTGAAAGCAAGATTATTGGAGTGACAGGGCATGGGCCAAGCTCTGAGAAGAAGGCAGCCTTTATGGAGGCTGGTCTCGATGAATGCTTGACGAAGCCATTGACAACTCAAAACCTTCACTCTCTCCTCCAACAATTCAAAAAATAA

Protein sequence

MEGGSSRSSGEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQQFKK

Homology

[Close]

BLAST of Spg017356 vs. NCBI nr
Match: XP_022144466.1 (two-component response regulator ARR22-like [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 5.2e-47
Identity = 106/137 (77.37%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MEGGSSRSSGEKK------VRALVVDDEGVIRYIHMSLLKKLNVE-VEAVENGKAAVNAF 60
           ME GSS  SG++K      + ALVVDDE V+RYIHMSLL+KLNVE VEA E+GKAAV+AF
Sbjct: 1   MEEGSSWGSGDEKEKKKKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAF 60

Query: 61  QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDEC 120
           QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKI+GVT +G  S +KAAFMEAGLD C
Sbjct: 61  QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHC 120

Query: 121 LTKPLTTQNLHSLLQQF 131
           L KPLT +NLHSLLQQF
Sbjct: 121 LMKPLTLENLHSLLQQF 137

[Close]

BLAST of Spg017356 vs. NCBI nr
Match: XP_038889283.1 (two-component response regulator 24-like [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 101/128 (78.91%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 1   MEGGSSRSSGEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFD 60
           MEGGS     EKKV  LVVDDE V R IHMSLLKKLNVE EA ENGK AV AFQ GASFD
Sbjct: 13  MEGGS-----EKKVSGLVVDDEAVNRQIHMSLLKKLNVEAEAAENGKEAVEAFQGGASFD 72

Query: 61  LVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTT 120
           LVLMDLEMP MDG QATKELRRMGV+SKIIGVTGHGP+SEKKAAFMEAGLD C  KPLT 
Sbjct: 73  LVLMDLEMPAMDGLQATKELRRMGVKSKIIGVTGHGPTSEKKAAFMEAGLDHCFMKPLTI 132

Query: 121 QNLHSLLQ 129
           ++L +LLQ
Sbjct: 133 ESLQTLLQ 135

[Close]

BLAST of Spg017356 vs. NCBI nr
Match: KAA8519414.1 (hypothetical protein F0562_013711 [Nyssa sinensis])

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 70/123 (56.91%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 10  GEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMP 69
           G +K+  L+VDD+   R IH +LL K  VE +  ENGK AV+ ++ GASFDLV+MD+EMP
Sbjct: 17  GNQKICVLIVDDDRATRRIHSALLNKFGVETQVAENGKEAVDLYRSGASFDLVIMDMEMP 76

Query: 70  LMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQQ 129
           +MDG  AT+ELRRMGV S I+GVT  G  SEK+ AFM AGLD+C  KPL +  + SLLQQ
Sbjct: 77  VMDGPTATQELRRMGVNSMIVGVTSRGQDSEKQ-AFMRAGLDDCHVKPLNSNTIASLLQQ 136

Query: 130 FKK 133
             K
Sbjct: 137 VNK 138

[Close]

BLAST of Spg017356 vs. NCBI nr
Match: XP_020092837.1 (two-component response regulator ORR42-like [Ananas comosus] >OAY64669.1 Two-component response regulator ORR42 [Ananas comosus])

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-28
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MEGGSSRSSGEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFD 60
           ++G +S SSG+  +RALVVDD    R +  +LL+   VE  A ENGK AV+ F+ G++FD
Sbjct: 8   IKGSTSASSGKNVLRALVVDDSKFHRVLQTALLRFFKVETTAAENGKEAVDLFRSGSNFD 67

Query: 61  LVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTT 120
           +VLMD EMP+MDG +AT+ LR MGV++KI+G+T +  SSE KA FMEAG+D+ L KPLT 
Sbjct: 68  IVLMDKEMPVMDGPEATRTLRSMGVDAKIVGITANA-SSESKAEFMEAGIDDFLLKPLTA 127

Query: 121 QNLHSLLQQFKK 133
            N+ SLL+   K
Sbjct: 128 DNVASLLENMGK 138

[Close]

BLAST of Spg017356 vs. NCBI nr
Match: XP_015882017.1 (two-component response regulator 24 [Ziziphus jujuba])

HSP 1 Score: 134.0 bits (336), Expect = 9.2e-28
Identity = 68/125 (54.40%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 9   SGEKKVRALVVDDEGVIRYIHMSLLKKLNV-EVEAVENGKAAVNAFQCGASFDLVLMDLE 68
           S E+K+  LVVDD+ VI+ IH  +LKK  + E +  ENGK A++  +CGA FDL+LMD+E
Sbjct: 2   SDERKISVLVVDDDPVIQKIHKMMLKKCKIFETQVAENGKQAIDLHRCGAIFDLILMDME 61

Query: 69  MPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLL 128
           MP+M+G QATKELR MGV+S I+GVT  G  SEK+ AF+ AGL++C  KPLT Q + S L
Sbjct: 62  MPIMNGIQATKELRAMGVDSMIVGVTSRGSDSEKQ-AFIGAGLNDCFAKPLTIQIISSFL 121

Query: 129 QQFKK 133
              K+
Sbjct: 122 HLIKR 125

[Close]

BLAST of Spg017356 vs. ExPASy Swiss-Prot
Match: F4JZT3 (Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 11  EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMPL 70
           E K+ ALVVDD  V + IH  LL +L ++ + V NGK AV+ +  G ++DL+LMD++MP+
Sbjct: 15  ESKLTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPI 74

Query: 71  MDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQQ 130
           M+G QATK LR MG+ESKI GVT      EKK  FMEAGL++   KPLT   L S+L +
Sbjct: 75  MNGIQATKRLREMGIESKIAGVTTRANEGEKK-EFMEAGLNDFQEKPLTISKLLSILHK 132

[Close]

BLAST of Spg017356 vs. ExPASy Swiss-Prot
Match: Q9M8Y4 (Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.6e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 3   GGSSRSSG----EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCG-A 62
           GG+ ++      +K +  L+VDD+ + R +H  ++K +    +  +NG+ AV   + G A
Sbjct: 7   GGTEKTKSIEVKKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEA 66

Query: 63  SFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKP 122
           SFDL+LMD EMP  DG   TK+LR M V S I+GVT      E++ AFMEAGL+ CL KP
Sbjct: 67  SFDLILMDKEMPERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKP 126

Query: 123 LTTQNLHSLL 128
           LT   +  L+
Sbjct: 127 LTKAKIFPLI 136

[Close]

BLAST of Spg017356 vs. ExPASy Swiss-Prot
Match: P48027 (Sensor protein GacS OS=Pseudomonas syringae pv. syringae OX=321 GN=gacS PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-15
Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 15  RALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMPLMDGA 74
           R L VDD      +  +LL+ +  EV AVE G AAVNA Q  A FDLVLMD++MP MDG 
Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQEA-FDLVLMDVQMPGMDGR 717

Query: 75  QATKELRRMGVESK-----IIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNL 124
           QAT+ +R    E       I+ +T H  ++EK+ + +++G+D+ LTKP++ + L
Sbjct: 718 QATEAIRAWEAERNQSSLPIVALTAHAMANEKR-SLLQSGMDDYLTKPISERQL 769

[Close]

BLAST of Spg017356 vs. ExPASy Swiss-Prot
Match: Q9F8D7 (Sensor histidine kinase GacS OS=Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CHA0) OX=1124983 GN=gacS PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 15  RALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMPLMDGA 74
           R L VDD      +  +LL+ +  +V AV+NG AA+NA Q    FDLV+MD++MP MDG 
Sbjct: 668 RVLCVDDNPANLLLIQTLLEDMGAKVLAVDNGYAALNAIQT-EPFDLVMMDVQMPGMDGR 727

Query: 75  QATKELR-----RMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNL 124
           Q+T+ +R     R G    I+ +T H  ++EK+ A +++G+D+ LTKP++ + L
Sbjct: 728 QSTEAIRQWESERHGTPLPIVALTAHAMANEKR-ALLQSGMDDYLTKPISERQL 779

[Close]

BLAST of Spg017356 vs. ExPASy Swiss-Prot
Match: Q75KW7 (Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 GN=RR41 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 12  KKVRALVVDDEGVIRYIHMSLLKKL--NVEVEAVENGKAAVNAFQ-CGASFDLVLMDLEM 71
           K +R L+V+DE + R +  + LK       V+  ENG+ AV   +   A +DLVLMD +M
Sbjct: 4   KMIRVLLVEDEEINRVVARAALKAAGGGDVVDEAENGEVAVQRVRDAAAPYDLVLMDKQM 63

Query: 72  PLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQ 131
           P+MDG +AT+ +R MGV + I+ V+  G  ++   AF+ AG D+  +KPL+ + L  +L 
Sbjct: 64  PVMDGHEATRRIRGMGVTTPIVAVSSDGLPADVD-AFITAGADDFTSKPLSKEKLGVILA 123

[Close]

BLAST of Spg017356 vs. ExPASy TrEMBL
Match: A0A6J1CTH4 (two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LOC111014146 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 106/137 (77.37%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MEGGSSRSSGEKK------VRALVVDDEGVIRYIHMSLLKKLNVE-VEAVENGKAAVNAF 60
           ME GSS  SG++K      + ALVVDDE V+RYIHMSLL+KLNVE VEA E+GKAAV+AF
Sbjct: 1   MEEGSSWGSGDEKEKKKKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAF 60

Query: 61  QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDEC 120
           QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKI+GVT +G  S +KAAFMEAGLD C
Sbjct: 61  QCGASFDLVLMDLEMPLMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHC 120

Query: 121 LTKPLTTQNLHSLLQQF 131
           L KPLT +NLHSLLQQF
Sbjct: 121 LMKPLTLENLHSLLQQF 137

[Close]

BLAST of Spg017356 vs. ExPASy TrEMBL
Match: A0A5J4ZNK8 (Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013711 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.1e-30
Identity = 70/123 (56.91%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 10  GEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMP 69
           G +K+  L+VDD+   R IH +LL K  VE +  ENGK AV+ ++ GASFDLV+MD+EMP
Sbjct: 17  GNQKICVLIVDDDRATRRIHSALLNKFGVETQVAENGKEAVDLYRSGASFDLVIMDMEMP 76

Query: 70  LMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQQ 129
           +MDG  AT+ELRRMGV S I+GVT  G  SEK+ AFM AGLD+C  KPL +  + SLLQQ
Sbjct: 77  VMDGPTATQELRRMGVNSMIVGVTSRGQDSEKQ-AFMRAGLDDCHVKPLNSNTIASLLQQ 136

Query: 130 FKK 133
             K
Sbjct: 137 VNK 138

[Close]

BLAST of Spg017356 vs. ExPASy TrEMBL
Match: A0A199UIV6 (Two-component response regulator ORR42 OS=Ananas comosus OX=4615 GN=LOC109713249 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MEGGSSRSSGEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFD 60
           ++G +S SSG+  +RALVVDD    R +  +LL+   VE  A ENGK AV+ F+ G++FD
Sbjct: 8   IKGSTSASSGKNVLRALVVDDSKFHRVLQTALLRFFKVETTAAENGKEAVDLFRSGSNFD 67

Query: 61  LVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTT 120
           +VLMD EMP+MDG +AT+ LR MGV++KI+G+T +  SSE KA FMEAG+D+ L KPLT 
Sbjct: 68  IVLMDKEMPVMDGPEATRTLRSMGVDAKIVGITANA-SSESKAEFMEAGIDDFLLKPLTA 127

Query: 121 QNLHSLLQQFKK 133
            N+ SLL+   K
Sbjct: 128 DNVASLLENMGK 138

[Close]

BLAST of Spg017356 vs. ExPASy TrEMBL
Match: A0A6P4A8B9 (two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.5e-28
Identity = 68/125 (54.40%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 9   SGEKKVRALVVDDEGVIRYIHMSLLKKLNV-EVEAVENGKAAVNAFQCGASFDLVLMDLE 68
           S E+K+  LVVDD+ VI+ IH  +LKK  + E +  ENGK A++  +CGA FDL+LMD+E
Sbjct: 2   SDERKISVLVVDDDPVIQKIHKMMLKKCKIFETQVAENGKQAIDLHRCGAIFDLILMDME 61

Query: 69  MPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLL 128
           MP+M+G QATKELR MGV+S I+GVT  G  SEK+ AF+ AGL++C  KPLT Q + S L
Sbjct: 62  MPIMNGIQATKELRAMGVDSMIVGVTSRGSDSEKQ-AFIGAGLNDCFAKPLTIQIISSFL 121

Query: 129 QQFKK 133
              K+
Sbjct: 122 HLIKR 125

[Close]

BLAST of Spg017356 vs. ExPASy TrEMBL
Match: A0A438D7E0 (Two-component response regulator ARR22 OS=Vitis vinifera OX=29760 GN=ARR22_8 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.8e-28
Identity = 66/126 (52.38%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 7   RSSGEKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDL 66
           + S   K+  L+VDD+ + R IH  LL K+ +E +AVENGK AV+ ++ GASFDL+LMDL
Sbjct: 4   KGSSSSKISTLIVDDDPLTRRIHKVLLTKVGLETQAVENGKEAVDLYRSGASFDLILMDL 63

Query: 67  EMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSL 126
           EMP+MDG +ATKELR MGV+S I+GVT      EK+  FM +GLD+C  KPLTT  + +L
Sbjct: 64  EMPIMDGPKATKELRAMGVQSMIVGVTARDLEVEKQ-MFMASGLDDCYVKPLTTDTVTAL 123

Query: 127 LQQFKK 133
           +++  K
Sbjct: 124 VEKLNK 128

[Close]

BLAST of Spg017356 vs. TAIR 10
Match: AT5G26594.1 (response regulator 24 )

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 11  EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCGASFDLVLMDLEMPL 70
           E K+ ALVVDD  V + IH  LL +L ++ + V NGK AV+ +  G ++DL+LMD++MP+
Sbjct: 15  ESKLTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPI 74

Query: 71  MDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKPLTTQNLHSLLQQ 130
           M+G QATK LR MG+ESKI GVT      EKK  FMEAGL++   KPLT   L S+L +
Sbjct: 75  MNGIQATKRLREMGIESKIAGVTTRANEGEKK-EFMEAGLNDFQEKPLTISKLLSILHK 132

[Close]

BLAST of Spg017356 vs. TAIR 10
Match: AT3G04280.1 (response regulator 22 )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 3   GGSSRSSG----EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCG-A 62
           GG+ ++      +K +  L+VDD+ + R +H  ++K +    +  +NG+ AV   + G A
Sbjct: 7   GGTEKTKSIEVKKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEA 66

Query: 63  SFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKP 122
           SFDL+LMD EMP  DG   TK+LR M V S I+GVT      E++ AFMEAGL+ CL KP
Sbjct: 67  SFDLILMDKEMPERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKP 126

Query: 123 LTTQNLHSLL 128
           LT   +  L+
Sbjct: 127 LTKAKIFPLI 136

[Close]

BLAST of Spg017356 vs. TAIR 10
Match: AT3G04280.2 (response regulator 22 )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 3   GGSSRSSG----EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCG-A 62
           GG+ ++      +K +  L+VDD+ + R +H  ++K +    +  +NG+ AV   + G A
Sbjct: 7   GGTEKTKSIEVKKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEA 66

Query: 63  SFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKP 122
           SFDL+LMD EMP  DG   TK+LR M V S I+GVT      E++ AFMEAGL+ CL KP
Sbjct: 67  SFDLILMDKEMPERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKP 126

Query: 123 LTTQNLHSLL 128
           LT   +  L+
Sbjct: 127 LTKAKIFPLI 136

[Close]

BLAST of Spg017356 vs. TAIR 10
Match: AT3G04280.3 (response regulator 22 )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 3   GGSSRSSG----EKKVRALVVDDEGVIRYIHMSLLKKLNVEVEAVENGKAAVNAFQCG-A 62
           GG+ ++      +K +  L+VDD+ + R +H  ++K +    +  +NG+ AV   + G A
Sbjct: 7   GGTEKTKSIEVKKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEA 66

Query: 63  SFDLVLMDLEMPLMDGAQATKELRRMGVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKP 122
           SFDL+LMD EMP  DG   TK+LR M V S I+GVT      E++ AFMEAGL+ CL KP
Sbjct: 67  SFDLILMDKEMPERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKP 126

Query: 123 LTTQNLHSLL 128
           LT   +  L+
Sbjct: 127 LTKAKIFPLI 136

[Close]

BLAST of Spg017356 vs. TAIR 10
Match: AT2G47430.1 (Signal transduction histidine kinase )

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 15   RALVVDDEGVIRYIHMSLLKKLNV-EVEAVENGKAAVNAFQCGAS------------FDL 74
            R LVVDD  + R +    LKK+ V EVE  ++GK A+     G +            FD 
Sbjct: 987  RVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDY 1046

Query: 75   VLMDLEMPLMDGAQATKELRRM----GVESKIIGVTGHGPSSEKKAAFMEAGLDECLTKP 119
            + MD +MP MDG +AT+E+R++    GV + II V+GH P SE+    ++AG+D  L K 
Sbjct: 1047 IFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKS 1106

The following BLAST results are available for this feature:

BLAST of Spg017356 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144466.1	5.2e-47	77.37	two-component response regulator ARR22-like [Momordica charantia]	[more]
XP_038889283.1	1.4e-44	78.91	two-component response regulator 24-like [Benincasa hispida]	[more]
KAA8519414.1	1.7e-29	56.91	hypothetical protein F0562_013711 [Nyssa sinensis]	[more]
XP_020092837.1	3.2e-28	53.03	two-component response regulator ORR42-like [Ananas comosus] >OAY64669.1 Two-com...	[more]
XP_015882017.1	9.2e-28	54.40	two-component response regulator 24 [Ziziphus jujuba]	[more]

BLAST of Spg017356 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JZT3	1.5e-25	51.26	Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=...	[more]
Q9M8Y4	9.6e-20	41.54	Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 ...	[more]
P48027	5.4e-15	42.98	Sensor protein GacS OS=Pseudomonas syringae pv. syringae OX=321 GN=gacS PE=3 SV=...	[more]
Q9F8D7	1.2e-14	40.35	Sensor histidine kinase GacS OS=Pseudomonas protegens (strain DSM 19095 / LMG 27...	[more]
Q75KW7	1.2e-14	38.21	Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Spg017356 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTH4	2.5e-47	77.37	two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5J4ZNK8	8.1e-30	56.91	Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05...	[more]
A0A199UIV6	1.5e-28	53.03	Two-component response regulator ORR42 OS=Ananas comosus OX=4615 GN=LOC109713249...	[more]
A0A6P4A8B9	4.5e-28	54.40	two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876...	[more]
A0A438D7E0	5.8e-28	52.38	Two-component response regulator ARR22 OS=Vitis vinifera OX=29760 GN=ARR22_8 PE=...	[more]

BLAST of Spg017356 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26594.1	1.1e-26	51.26	response regulator 24	[more]
AT3G04280.1	6.8e-21	41.54	response regulator 22	[more]
AT3G04280.2	6.8e-21	41.54	response regulator 22	[more]
AT3G04280.3	6.8e-21	41.54	response regulator 22	[more]
AT2G47430.1	3.6e-14	38.84	Signal transduction histidine kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 14..127 e-value: 2.9E-24 score: 96.6
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 17..127 e-value: 2.8E-23 score: 82.2
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 15..131 score: 35.49411
None	No IPR available	GENE3D	3.40.50.2300		coord: 3..132 e-value: 1.3E-33 score: 117.8
None	No IPR available	PANTHER	PTHR43228	TWO-COMPONENT RESPONSE REGULATOR	coord: 5..131
None	No IPR available	PANTHER	PTHR43228:SF12	TWO-COMPONENT RESPONSE REGULATOR 24	coord: 5..131
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 17..127 e-value: 6.18015E-37 score: 120.267
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 13..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017356.1	Spg017356.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity