Spg017043 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017043
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	26S proteasome regulatory subunit RPN11
Location	scaffold9: 45881447 .. 45885061 (-)
RNA-Seq Expression	Spg017043
Synteny	Spg017043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCACCGCTCAGTATTCGCCATTTTTAAGAACCAGACGGGAGAAGTCTTGCTGCGAAAGAAAGTTCAAGTCTTGCTTGTCCGGCAGCCGGAAAGATCGACGCTGAGGGAAAACTTTGGGAATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCACCAGACTCGCCCACTCTGGATTCGTCGGAGCAGGTCTACATCTCCTCGCTCGCTCTTCTGAAGATGCTCAAGCACGGTACTATTCGGAATGAAATTGTCACTTTTCTTGTTTGTTCGGCTCTTATTCTTTTAGATGCGTTCACAATCTTCTACTTAGTTAATGTTTAGATGTTCCGTCGACTCTGCTGCTCTTCTATATAATCAACGAACTTGGATGGCTTTCTTCGGTTTTAGGTTTAGGATGTTGGATGAAATTGTAGTTATTGGTAATTAAGATCGTGAATTTTGTATATCAATTTTCAGTTTATGTAATTTTCCACTGCAATGTGCATGATAGGAAGAGCTGGGGTTCCCATGGAGGTGATGGGTCTGATGTTGGGAGAGTTTATTGATGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCACAAAGTGGTACCGGTGTTAGTGTTGAAGCTGTTGATCATGTATTCCAGACCAACATGCTTGACATGCTTAAACAAACTGGACGGTAATTTTCTTTAGTTTTGAATATCTGTGAATATAGATTCAGATTTCTAATGACTAACTTTGCTGGTGAGAACATCTCAAAGATTAAGTTACTGGAAACCAAATTTTAGATCCTGCAAAACTGCTTCCCATTCTATTTATATGTACATGCTTGCTGTCTGTGATGTGTGGGAGGCCTTGTGCTGTCCAGTGCGCGTTCAGTTTTTGTAATTTATTCAGTTGTTTTAGGCCTGATGCTGACAGAAAACTTACATGCCCTGCTTAGGTTTCATTGAAAATTATGCAAATGAATGTTTACAGGGTCCTGGGATGGTTAAACTCTAACTTAATCAGATGATCTTTGATGTCAATTTCTCTGTTGGCCAATTTGCACATACATGCACTTGATAGAGATTCTAGTTGGCTGGCCTGCAATTTCCTTTCCTACTTATACATCTAGGCATCATTTGTACAGAATCAGAATCATTTCGAATGCTGATTCCAACTCTTTACTTCTACTAGTGAATGACTCCCTGAATGTGGGCACAATCTATTTCTAATGCCATTCCCGTTTCCCTGGAGCAATACTCACTAATTTGTTATCTTCTTTTTTTTATCCCTTGTTTGGTTGTGTCCCTTGTTTCACTTGAATGACTCCCTATTTTTTGGCTTCTCCTTACCATTTTTTCTTTAACTTCATCAGTTTTGGGGTTTTGATTGGTATGTTAGTTTTCATTTTCATCAAATGATGTTATAATTAATACTAAATAAAGTAAAGATTCATGGATTTCAGTCCCCAAGAGCTAGTACGCATAATCTCAATATCATTCTCACCCTAGAGGTACCCCCCCCCCCCCCCCCCCCCAAATTCTTGGTCTCTATCTGGTTCAGCTTAAAGAAGATAGAATGAAAGGCCCTGGTTTGAGATTTTGATTCATGTGCTTAATCTATTTATTTACTGGGAAAAGAATTCTGTTACAAGAATTTTCTCATTTCAAGTGGCAGTAGTAGTACATGTACATTCCATGCAACTTGCAAGCTTACATTAATATTCAAATGTTATCTTAATCTTCTTGCAAATTAGAAAAGACTCTGTATAGAAAATAAATGGAAAGAAGCCCCCTAAGGGACCACCCACTGGCTAGCTTAGCCTCTGAGTAACATCTACCAAAAGTTGCATGTTCAAATCTTCAAATGAGCTTAATAAAGAAAATCCTCAATGTCTCCAAAGTTTCGGCTTTGGAGCGGGTGCAGGCTTTTTAAAAGAAAGATAGAGGGAAAAAGATGAAGAGAGGGCCTATCTATATACTCAAATGTCTTCACCATTTTTCTAAAGAGCATGAACGTGATTCTGATTTTACTTGCAGCCAGGGATTAGCCACCCACTAAGAGGCATGAATAGGAATTTTTTATTTATTCCCATTCCCTCCCATTTTCATTCTGATTTCCTCTCATTCAATTCCCAAAAAGGTACAATGGAATTAATGCAATGGTACTTTAAAAAAAAAAAAAAAAAAAAACTATTTTCTTTAGTTGATGTTGAACGATCACTTTAGCCCAGTTGCTAGCATAGGAGGTCCAGTCGTTTCTACTTCAATTATACTGAAGATAGAACTCATTATTAACTTAAAATTTTTTGTTACCCATTACCTTGAACTATCTGATTTGTTGTCTTCAGCCCTGAGATGGTTGTAGGATGGTACCACTCTCATCCTGGATTTGGATGTTGGCTCTCTGGTGTCGACATAAATACTCAGCAGGTTTGTGGTTCTGAAAGAGTCTCCATGGCTCCATTTAACATTATTATTATCCACCTTATTGTTTAATTTTTCTAGGGGGTCAATGCCTTTTCTTTTTCGTGTACAATATTTTCTTATTTATAAGAGTTTTTTTTTTTTTTTTTTGTAATAAAGTTTTTTACTGCACATTTTCTTTTCTTGGGTCTTCCAGCTACAAAAAGGATGTATGAAGTTATTTGTTTCGCTTGACTTGAGCAATTTGGCAAATGATTTGTGATTAAGATTAAATGTGAAATGCGCTTACTTTCATTGTCATTTGTAGAGTTTTGAAGCTCTTAATCAGCGAGCTGTTGCTGTAGTTGTGGATCCAATCCAAAGTGTCAAGGGAAAGGTGGTTATCGACGCCTTTCGTCTAATTAATCCCCAGACAATGATGCTTGGCCAAGAACCACGACAGACAACATCAAATCTCGGCCATCTTAATAAACCATCTATTCAAGTGAGTATTGCACAAATACAATTAAATCAATTCTAGCTTTCAATCGATTGACCTTTTTTGTGCCATCTTTTTCAGGCATTAATCCATGGATTGAATCGCCATTATTACTCCATAGCAATTAACTATAGGAAGAATGAGCTTGAAGAGAAGATGTTGCTTAACCTTCACAAGAAGAAATGGACTGATGGGCTAACACTTCGACGATTTGATACACACTCGAAAACTAATGAGCAGACTGTCCAGGTAAGCAAATGTCTTTGAACCTTCTAGAGGTTGTGTCTCTAGTTGCAACATCAACATTGAATAAATAAGTTTCTTGCATTGCCAAATAATTCAATTGCTCTCTAATTTTATTTATGTCAATCCTCGTAAGAGTGATCATCTCATCCAAACCAAAAAAAGGTTGTGATCAATTATCTTGATGGTTCAATTTTTACAGCAAAACCTAATAAGATTGCTCGAAGCTGCGGGTATGCAATTATATTTCACTGTTCATAATCTCTGTTTATGATTTATGGGTCTCTGGTATATGCTGTGCAGGAAATGCTGAACTTGGCCATTAAGTACAACAAGGCAGTGCAGGAGGAAGATGAGTTGCCACCAGAGAAACTCGCCATTGCAAATGTGGGAAGGCAAGATGCTAAGAAGCACCTGGAAGAACATGTCTCCAATTTGATGTCATCAAACATCATACAGACATTAGGAA

mRNA sequence

TCCCACCGCTCAGTATTCGCCATTTTTAAGAACCAGACGGGAGAAGTCTTGCTGCGAAAGAAAGTTCAAGTCTTGCTTGTCCGGCAGCCGGAAAGATCGACGCTGAGGGAAAACTTTGGGAATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCACCAGACTCGCCCACTCTGGATTCGTCGGAGCAGGTCTACATCTCCTCGCTCGCTCTTCTGAAGATGCTCAAGCACGATGTTCCGTCGACTCTGCTGCTCTTCTATATAATCAACGAACTTGGATGGCTTTCTTCGGTTTTAGGTTTAGGATGTTGGATGAAATTGTAGTTATTGGAAGAGCTGGGGTTCCCATGGAGGTGATGGGTCTGATGTTGGGAGAGTTTATTGATGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCACAAAGTGGTACCGGTGTTAGTGTTGAAGCTGTTGATCATGTATTCCAGACCAACATGCTTGACATGCTTAAACAAACTGGACGGTAA

Coding sequence (CDS)

TCCCACCGCTCAGTATTCGCCATTTTTAAGAACCAGACGGGAGAAGTCTTGCTGCGAAAGAAAGTTCAAGTCTTGCTTGTCCGGCAGCCGGAAAGATCGACGCTGAGGGAAAACTTTGGGAATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCACCAGACTCGCCCACTCTGGATTCGTCGGAGCAGGTCTACATCTCCTCGCTCGCTCTTCTGAAGATGCTCAAGCACGATGTTCCGTCGACTCTGCTGCTCTTCTATATAATCAACGAACTTGGATGGCTTTCTTCGGTTTTAGGTTTAGGATGTTGGATGAAATTGTAGTTATTGGAAGAGCTGGGGTTCCCATGGAGGTGATGGGTCTGATGTTGGGAGAGTTTATTGATGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCACAAAGTGGTACCGGTGTTAGTGTTGAAGCTGTTGATCATGTATTCCAGACCAACATGCTTGACATGCTTAAACAAACTGGACGGTAA

Protein sequence

SHRSVFAIFKNQTGEVLLRKKVQVLLVRQPERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR

Homology

[Close]

BLAST of Spg017043 vs. NCBI nr
Match: BBG95263.1 (Mov34/MPN/PAD-1 family protein [Prunus dulcis])

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-33
Identity = 87/147 (59.18%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 31  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDS 90
           ER    EN  +G A+E+VR CRR  G P +RLA S F  AGLHLL R  +DA+A      
Sbjct: 35  EREKSEENVRHGEASEDVRWCRRRFGPPTSRLADSRFFRAGLHLLPRPPQDAEA------ 94

Query: 91  AALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQ 150
                                       RAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQ
Sbjct: 95  ----------------------------RAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQ 147

Query: 151 SGTGVSVEAVDHVFQTNMLDMLKQTGR 178
           SGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 155 SGTGVSVEAVDHVFQTNMLDMLKQTGR 147

[Close]

BLAST of Spg017043 vs. NCBI nr
Match: MBA0738251.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-28
Identity = 82/137 (59.85%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 41  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTW 100
           +G  TE+VR CRR IG+PAT    S  VGA LH                S ALL      
Sbjct: 3   HGQITEDVRWCRRCIGSPATGFPDSRLVGASLH---------------TSLALL------ 62

Query: 101 MAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAV 160
                   +ML      GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTG SVE V
Sbjct: 63  --------KMLKH----GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGASVEVV 106

Query: 161 DHVFQTNMLDMLKQTGR 178
           DHVFQTNMLDMLKQTGR
Sbjct: 123 DHVFQTNMLDMLKQTGR 106

[Close]

BLAST of Spg017043 vs. NCBI nr
Match: MBA0612912.1 (hypothetical protein [Gossypium davidsonii] >MBA0648108.1 hypothetical protein [Gossypium klotzschianum])

HSP 1 Score: 134.8 bits (338), Expect = 7.2e-28
Identity = 82/140 (58.57%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 38  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQ 97
           N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL   
Sbjct: 8   NVKHGQITEDVRRCRRRVGSTATGFPDSRLVGASLH---------------TSLALL--- 67

Query: 98  RTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSV 157
                      +ML      GRAGVPMEVMGLMLG F+DEYTVRVVDVFAM QSGTGVSV
Sbjct: 68  -----------KMLKH----GRAGVPMEVMGLMLGGFVDEYTVRVVDVFAMSQSGTGVSV 114

Query: 158 EAVDHVFQTNMLDMLKQTGR 178
           EAVDHVFQTNMLDMLKQTGR
Sbjct: 128 EAVDHVFQTNMLDMLKQTGR 114

[Close]

BLAST of Spg017043 vs. NCBI nr
Match: MBA0788094.1 (hypothetical protein [Gossypium trilobum])

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-24
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 117 IGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTG 176
           +GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTG
Sbjct: 18  LGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTG 77

Query: 177 R 178
           R
Sbjct: 78  R 78

[Close]

BLAST of Spg017043 vs. NCBI nr
Match: AFK36477.1 (unknown [Medicago truncatula])

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-24
Identity = 65/89 (73.03%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 89  DSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAM 148
           DS  L  +++ +++ F    +ML      GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAM
Sbjct: 25  DSPTLDSSEQVYISSFAL-LKMLKH----GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAM 84

Query: 149 PQSGTGVSVEAVDHVFQTNMLDMLKQTGR 178
           PQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 85  PQSGTGVSVEAVDHVFQTNMLDMLKQTGR 108

[Close]

BLAST of Spg017043 vs. ExPASy Swiss-Prot
Match: Q9LT08 (26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN11 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-27
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 44  GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 103

[Close]

BLAST of Spg017043 vs. ExPASy Swiss-Prot
Match: O00487 (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens OX=9606 GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+D+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Sbjct: 45  GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 104

[Close]

BLAST of Spg017043 vs. ExPASy Swiss-Prot
Match: O35593 (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus OX=10090 GN=Psmd14 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+D+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Sbjct: 45  GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 104

[Close]

BLAST of Spg017043 vs. ExPASy Swiss-Prot
Match: Q6FKS1 (26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPN11 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+DEYTV VVDVFAMPQSGTGVSVEAVD VFQ  M+DMLKQTGR
Sbjct: 41  GRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGR 100

[Close]

BLAST of Spg017043 vs. ExPASy Swiss-Prot
Match: O76577 (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans OX=6239 GN=rpn-11 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-23
Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+D+YTV V+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGR
Sbjct: 47  GRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 106

[Close]

BLAST of Spg017043 vs. ExPASy TrEMBL
Match: A0A4Y1QTQ7 (26S proteasome regulatory subunit RPN11 OS=Prunus dulcis OX=3755 GN=Prudu_003752 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 87/147 (59.18%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 31  ERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDS 90
           ER    EN  +G A+E+VR CRR  G P +RLA S F  AGLHLL R  +DA+A      
Sbjct: 35  EREKSEENVRHGEASEDVRWCRRRFGPPTSRLADSRFFRAGLHLLPRPPQDAEA------ 94

Query: 91  AALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQ 150
                                       RAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQ
Sbjct: 95  ----------------------------RAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQ 147

Query: 151 SGTGVSVEAVDHVFQTNMLDMLKQTGR 178
           SGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 155 SGTGVSVEAVDHVFQTNMLDMLKQTGR 147

[Close]

BLAST of Spg017043 vs. ExPASy TrEMBL
Match: A0A453EPG5 (26S proteasome regulatory subunit RPN11 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 26  LVRQPERSTLRENFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQAR 85
           L  +P R+T R    +GAA  ++RR R   G  A  LA +  + AGLHLL R  +DAQAR
Sbjct: 28  LTPEPNRTTQR---SHGAAAADLRRRRD--GPAAVGLAAARLLRAGLHLLPRPPQDAQAR 87

Query: 86  CSVDSAALLYNQRTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDV 145
             + +++LL      +     R  + +    IGRAGVPMEVMGLMLGEF+D+YTVRVVDV
Sbjct: 88  SVLQASSLLAPIYALLLLPESRVNLSE---TIGRAGVPMEVMGLMLGEFVDDYTVRVVDV 147

Query: 146 FAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 178
           FAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 148 FAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 171

[Close]

BLAST of Spg017043 vs. ExPASy TrEMBL
Match: A0A7J9BPZ6 (26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_011641 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 9.2e-29
Identity = 82/137 (59.85%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 41  NGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQRTW 100
           +G  TE+VR CRR IG+PAT    S  VGA LH                S ALL      
Sbjct: 3   HGQITEDVRWCRRCIGSPATGFPDSRLVGASLH---------------TSLALL------ 62

Query: 101 MAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAV 160
                   +ML      GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTG SVE V
Sbjct: 63  --------KMLKH----GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGASVEVV 106

Query: 161 DHVFQTNMLDMLKQTGR 178
           DHVFQTNMLDMLKQTGR
Sbjct: 123 DHVFQTNMLDMLKQTGR 106

[Close]

BLAST of Spg017043 vs. ExPASy TrEMBL
Match: A0A7J8RHU7 (26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_013458 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.5e-28
Identity = 82/140 (58.57%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 38  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQ 97
           N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL   
Sbjct: 8   NVKHGQITEDVRRCRRRVGSTATGFPDSRLVGASLH---------------TSLALL--- 67

Query: 98  RTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSV 157
                      +ML      GRAGVPMEVMGLMLG F+DEYTVRVVDVFAM QSGTGVSV
Sbjct: 68  -----------KMLKH----GRAGVPMEVMGLMLGGFVDEYTVRVVDVFAMSQSGTGVSV 114

Query: 158 EAVDHVFQTNMLDMLKQTGR 178
           EAVDHVFQTNMLDMLKQTGR
Sbjct: 128 EAVDHVFQTNMLDMLKQTGR 114

[Close]

BLAST of Spg017043 vs. ExPASy TrEMBL
Match: A0A7J8UCB9 (26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium klotzschianum OX=34286 GN=Goklo_015894 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.5e-28
Identity = 82/140 (58.57%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 38  NFGNGAATENVRRCRRFIGAPATRLAHSGFVGAGLHLLARSSEDAQARCSVDSAALLYNQ 97
           N  +G  TE+VRRCRR +G+ AT    S  VGA LH                S ALL   
Sbjct: 8   NVKHGQITEDVRRCRRRVGSTATGFPDSRLVGASLH---------------TSLALL--- 67

Query: 98  RTWMAFFGFRFRMLDEIVVIGRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSV 157
                      +ML      GRAGVPMEVMGLMLG F+DEYTVRVVDVFAM QSGTGVSV
Sbjct: 68  -----------KMLKH----GRAGVPMEVMGLMLGGFVDEYTVRVVDVFAMSQSGTGVSV 114

Query: 158 EAVDHVFQTNMLDMLKQTGR 178
           EAVDHVFQTNMLDMLKQTGR
Sbjct: 128 EAVDHVFQTNMLDMLKQTGR 114

[Close]

BLAST of Spg017043 vs. TAIR 10
Match: AT5G23540.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.9e-28
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 118 GRAGVPMEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 177
           GRAGVPMEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 44  GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 103

[Close]

BLAST of Spg017043 vs. TAIR 10
Match: AT5G23540.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 124 MEVMGLMLGEFIDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 178
           MEVMGLMLGEF+DEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR
Sbjct: 1   MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 54

The following BLAST results are available for this feature:

BLAST of Spg017043 vs. NCBI nr


Match Name	E-value	Identity	Description
BBG95263.1	2.6e-33	59.18	Mov34/MPN/PAD-1 family protein [Prunus dulcis]	[more]
MBA0738251.1	1.9e-28	59.85	hypothetical protein [Gossypium gossypioides]	[more]
MBA0612912.1	7.2e-28	58.57	hypothetical protein [Gossypium davidsonii] >MBA0648108.1 hypothetical protein [...	[more]
MBA0788094.1	3.7e-24	96.72	hypothetical protein [Gossypium trilobum]	[more]
AFK36477.1	3.7e-24	73.03	unknown [Medicago truncatula]	[more]

BLAST of Spg017043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT08	8.3e-27	98.33	26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana ...	[more]
O00487	6.6e-24	90.00	26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens OX=9606 GN=PSMD1...	[more]
O35593	6.6e-24	90.00	26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus OX=10090 GN=Psmd...	[more]
Q6FKS1	1.1e-23	90.00	26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain ATCC 2001 / ...	[more]
O76577	2.5e-23	88.33	26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans OX=623...	[more]

BLAST of Spg017043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1QTQ7	1.2e-33	59.18	26S proteasome regulatory subunit RPN11 OS=Prunus dulcis OX=3755 GN=Prudu_003752...	[more]
A0A453EPG5	1.4e-32	58.55	26S proteasome regulatory subunit RPN11 OS=Aegilops tauschii subsp. strangulata ...	[more]
A0A7J9BPZ6	9.2e-29	59.85	26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium gossypioides OX=...	[more]
A0A7J8RHU7	3.5e-28	58.57	26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium davidsonii OX=34...	[more]
A0A7J8UCB9	3.5e-28	58.57	26S proteasome regulatory subunit RPN11 (Fragment) OS=Gossypium klotzschianum OX...	[more]

BLAST of Spg017043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23540.1	5.9e-28	98.33	Mov34/MPN/PAD-1 family protein	[more]
AT5G23540.2	4.0e-24	98.15	Mov34/MPN/PAD-1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 109..177 e-value: 1.8E-18 score: 68.5
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 118..177
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 123..175 e-value: 2.1E-8 score: 34.1
IPR035299	26S Proteasome non-ATPase regulatory subunit 14	PANTHER	PTHR10410:SF22	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 HOMOLOG	coord: 118..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017043.1	Spg017043.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0070536	protein K63-linked deubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0061578	Lys63-specific deubiquitinase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004843	thiol-dependent deubiquitinase