Spg016946 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGGGTGAGGGAGGGTTTGTTGGGGAAGAAGAAGATGGGAGAGGTGGTGGTAACTGTTGGGCGGCGGGTTATCGACGGCAGCAGCGGCGACGAGCTATTGCCGGCGAGGAGGGTGTTTTACTCAGATTTGAAGATTGAGGGGGGGAGGGGGGTTGTTAAGGAAGAACTAGATGAAAGGGGTGAGAGAGGGTTTGTTGAGGAAGAAAAGATGGGAGGGGGGTGGTGGTTGTCGGCGATGAAGAAGAAGGCGGCGGGTTATCGGCGGCGACGGGTTATAGCCGGCGAGGAGGGGAAGGGTTTCGGGTAGAAAGAGGGAGGAGAGTGGAAGATTATGTTTTTATTTTATTATTTTTATTACTTTTAATTGATCTTTATATTATTTATTTTAAATTAAAAATTAATATTTTATTTTTTAACTGCCACGTCAGCACCGTTAAAAAAATTAACGGTGGAGGGACTAAATTGAACTATTTCCGAAACAGTGGGGACTTGATTGTTCGATTTTGAAACCTAGGGACCTATTGGAAACGAACTCGAAACATGAGGGACCAAAAAGGTATTTTACCCAAAAATAAAAGAGAGAAAAAGGAAAAGTTCCATGTACACTTTGTTGCAACCTTATCATGAACTTAGTGCACTTAACTTTCAAGTTAAAGGACCAAAGGTGAAGTGAATGCGCCCTTTTAAGTAAGTCTTATTGATAGAGCCCTTAGCTTGTACGTAACTCTTGTATTTTATGTTACATTTTGATTGTTGTAGGAAAGAAATAATTATTCCAACTCTTCTCTCTTCACTCACAAAATTCTCTGACCGCAATCTCAAGAGCTACCACAGCAAATTTTCTGAAGAAACTCAAAGCCTACACAAGTATATCTTTCTACCTTTACATTTTCACCTTTCTTATTTTCACTTGTGTAACTCTACTCTTTTTAATAACAGTTCGAGAACTACAACCAACACTCAAAATACTAAGGGTCGTTTAATAAGGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGAAAATCAAGCTTATAAACCCTACTTTCATCTATGGATTTCTTTGTTACGTTAGTTATCTACTTTCTAAATATGTTTTCATAAAGGAAGAGTGAAAATCATAGTATAGCAGTAAACAAATCGTGGAAAATAAGTATAAATTTAAAAAACATAAAACTAAAAACGAGGTCTAAAACATCCACATAGAAGAGGATAAAAATTCAATAAAAAAAAAAATAAAATTATGGAATAAAAAACAACAAAAAAATTTGAGAAACCACCTTCAACTTCAATTATTAATTATTCTCTATGTTTTATTGTAAGAGGGGCACCATTGAAGATGTTGGAAGTTAGAAATAGAATCATTATTGTGGCTGCCATTGTTGTTTCTTCGGTTCTAAGCCTTGCTTTTGGATCTCCTGTATTGCCTCTTGAGGAAGGTACACATGTTTATTGCTTAGTTAATTTATTTAATTATTGATTATTAGTTACTTTTTTAATATAATGAATTTGTTTTACTGAAATTATATCTAACTAATAACTCGACTGGACGACCCAGTTGAAGGTTTAAGGTATGTGGCAGAGAGATTGGGAAAGAAAGATTGGAATTTTAGTGTCGATCCATGCAGCCCACAGTTTGGTCGGATGTCTCAAAGCTATGACATTCAAGGTTTCAAAAATGATGTCATCTGTAATTGCACATTTCAAAATTCTACTGTCTGCCACGTCACCCATATGTATGCTCTCTCTTGCCTTTCATAATTTAGGACCAAAATAGATTTTTTTGTAGTGTTAAAATGAGAAAAATGATTCTACTTTTACTCCT ATGGGAGGGGTGAGGGAGGGTTTGTTGGGGAAGAAGAAGATGGGAGAGGTGGTGGTAACTGTTGGGCGGCGGGTTATCGACGGCAGCAGCGGCGACGAGCTATTGCCGGCGAGGAGGGTGTTTTACTCAGATTTGAAGATTGAGGGGGGGAGGGGGGTTGTTAAGGAAGAACTAGATGAAAGGGGTGAGAGAGGGTTTGTTGAGGAAGAAAAGATGGGAGGGGGGTGGTGGTTGTCGGCGATGAAGAAGAAGGCGGCGGGGGCACCATTGAAGATGTTGGAAGTTAGAAATAGAATCATTATTGTGGCTGCCATTGTTGTTTCTTCGGTTCTAAGCCTTGCTTTTGGATCTCCTGTATTGCCTCTTGAGGAAGTTGAAGGTTTAAGGTATGTGGCAGAGAGATTGGGAAAGAAAGATTGGAATTTTAGTGTCGATCCATGCAGCCCACAGTTTGGTCGGATGTCTCAAAGCTATGACATTCAAGGTTTCAAAAATGATGTCATCTGTAATTGCACATTTCAAAATTCTACTGTCTGCCACGTCACCCATATGTATGCTCTCTCTTGCCTTTCATAA ATGGGAGGGGTGAGGGAGGGTTTGTTGGGGAAGAAGAAGATGGGAGAGGTGGTGGTAACTGTTGGGCGGCGGGTTATCGACGGCAGCAGCGGCGACGAGCTATTGCCGGCGAGGAGGGTGTTTTACTCAGATTTGAAGATTGAGGGGGGGAGGGGGGTTGTTAAGGAAGAACTAGATGAAAGGGGTGAGAGAGGGTTTGTTGAGGAAGAAAAGATGGGAGGGGGGTGGTGGTTGTCGGCGATGAAGAAGAAGGCGGCGGGGGCACCATTGAAGATGTTGGAAGTTAGAAATAGAATCATTATTGTGGCTGCCATTGTTGTTTCTTCGGTTCTAAGCCTTGCTTTTGGATCTCCTGTATTGCCTCTTGAGGAAGTTGAAGGTTTAAGGTATGTGGCAGAGAGATTGGGAAAGAAAGATTGGAATTTTAGTGTCGATCCATGCAGCCCACAGTTTGGTCGGATGTCTCAAAGCTATGACATTCAAGGTTTCAAAAATGATGTCATCTGTAATTGCACATTTCAAAATTCTACTGTCTGCCACGTCACCCATATGTATGCTCTCTCTTGCCTTTCATAA MGGVREGLLGKKKMGEVVVTVGRRVIDGSSGDELLPARRVFYSDLKIEGGRGVVKEELDERGERGFVEEEKMGGGWWLSAMKKKAAGAPLKMLEVRNRIIIVAAIVVSSVLSLAFGSPVLPLEEVEGLRYVAERLGKKDWNFSVDPCSPQFGRMSQSYDIQGFKNDVICNCTFQNSTVCHVTHMYALSCLS Homology
BLAST of Spg016946 vs. NCBI nr
Match: XP_022134227.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Momordica charantia]) HSP 1 Score: 121.3 bits (303), Expect = 8.9e-24 Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Spg016946 vs. NCBI nr
Match: PON98515.1 (Leucine-rich repeat Transmembrane protein kinase [Trema orientale]) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-15 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Spg016946 vs. NCBI nr
Match: PON69844.1 (Leucine-rich repeat Transmembrane protein kinase [Parasponia andersonii]) HSP 1 Score: 92.0 bits (227), Expect = 5.8e-15 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Spg016946 vs. NCBI nr
Match: KAB5521345.1 (hypothetical protein DKX38_025664 [Salix brachista]) HSP 1 Score: 89.4 bits (220), Expect = 3.8e-14 Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Spg016946 vs. NCBI nr
Match: KAG8386455.1 (hypothetical protein BUALT_Bualt03G0150500 [Buddleja alternifolia]) HSP 1 Score: 89.4 bits (220), Expect = 3.8e-14 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy Swiss-Prot
Match: C0LGN2 (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-08 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.2e-08 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy TrEMBL
Match: A0A6J1BZ22 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006534 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 4.3e-24 Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy TrEMBL
Match: A0A2P5FL36 (Leucine-rich repeat Transmembrane protein kinase OS=Trema orientale OX=63057 GN=TorRG33x02_057490 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy TrEMBL
Match: A0A2P5D988 (Leucine-rich repeat Transmembrane protein kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_086280 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.8e-15 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy TrEMBL
Match: A0A5N5JVL7 (Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_025664 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14 Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Spg016946 vs. ExPASy TrEMBL
Match: A0A6J1BYM7 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006454 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of Spg016946 vs. TAIR 10
Match: AT3G14840.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of Spg016946 vs. TAIR 10
Match: AT3G14840.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Spg016946 vs. TAIR 10
Match: AT1G07650.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Spg016946 vs. TAIR 10
Match: AT1G07650.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Spg016946 vs. TAIR 10
Match: AT1G29740.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07 Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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