Spg016874 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016874
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Mads box protein, putative
Location	scaffold9: 45376818 .. 45378421 (+)
RNA-Seq Expression	Spg016874
Synteny	Spg016874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAGTGAAGCTTCCAATCAAGAAGATTGAGGACGTTTCCAGTCGTGGAGTCACTTTCTGCAAAAGGAAAAAGAGACTCATCAAGAATGCTTACGAATTATCTGTTCTCTGTGACATTGATATTGCTCTCATCATTCTCTCTCCCACCGGAGAACTCAGCTTTTTCTCTGCAAATTCAAGGTTTTGCCGTTTCTTCAACTTTTAAATTGTTTCAATTTATTAAAAGAAGAAAAAGAACCAAAGATAATCTATATCCACGATTAAAAAAAAAACACACACACACACACTTCTTTTTCTTTTTAAAAAGTTGTTTTTTGTATGTCCAAGAATCGATGATGTGTTGGATCGATTCGTCAATCTCAGTGTAGATGAACGAGAAAGGTCAGTAGATTTGTGCCCTTTTCTTTCCTTATCTCGGTATTTTTGTAACATATTTTGGGCTAAATTAGCTTTTCTTGTATCTATTTTGGACGGTTTTCAAAAGACTGCGGGATAAAGAGGTAAATATTTGCTCTTGTGTCAACCACGAAAATGCAATTAAACAGTCAGTATACGTTAAAAATGAATTAACACGTTTTGTTGAGCAGTTTCTCATTATGTGCAAGGACAAGTCGATGCAAGAAAGCAATCCACCACAACAACACACGTCCAGGTTCTAATTTGTCATTAATCAATTTAATGATTTGGTACTTTCTAACGAACAAATAACAAACAATAATGACAACAATCATATTTATGAACTTAGCTATAGAGTAGTCAATAAAATTATAATGTAACATGCATTATTGTCGACAGAGTGAATCATATTAGTGAAATAGCTTATATTTTTATGTGTTCTATCTATTATAAGTAAATGATATATTTATTTTGTAAAGATATTTTATTTTACAAAAGAATAATTCTACATGTCGAGTTATTGGATGATTATTAATTAAATAATCGCTTTAATGGGTTCATGTGAAGCAGCGGTGGTAGCAATGACTACGAGCAACGCATAAAGGTACACATGAAATCCACTTTCGGCGGTGAGATCGAGAGAGTAGAACTATTTGCTTTGCGATTTTGAGGGTTTTTTTTTTTTTTTCAAATTATAACTACTGTTGAACACGACGACAGAATATTCAGCATGAAGTTCTCACCAGCAAATCTCAGTTACGGGAGTTAAGGAAAGGCCTTGGGTAACGTGTAAAGCAACAATTGTACTTCAATGTTATCTGTTCAATCTGAAGAAAAATTTGAAGTTATTTCGATTGTAAAATTTGTTTTGTATGGTTCAATTCTAGGGCATTTGAAGGCGTTTTGTCGAAGATCAGAACGATCGGCGAGGCGGAAAATGTGGAGAAAATTCTCGAGGAAACCTTGAGGAAATTGCTTGCGCGCAAGGTTAGTGGTTCTGTTTTTGACTGATTGATCGATCTATTCTACTGCTGTTATGAATTTTGGATAGATGGCTGAATTTTACAGTTTGAGTGATAAATTTTGCAGCAAGTGCTCCAGCGGCAGTGCAATTCCTCTGAACCGTCGGCGGAACTTTTACGCGTACGTAACCCTAACCATCCACAGTTTACGTTTTCAGTATTTCAAAATTTCAGTCAGTGA

mRNA sequence

ATGGGGAGAGTGAAGCTTCCAATCAAGAAGATTGAGGACGTTTCCAGTCGTGGAGTCACTTTCTGCAAAAGGAAAAAGAGACTCATCAAGAATGCTTACGAATTATCTGTTCTCTGTGACATTGATATTGCTCTCATCATTCTCTCTCCCACCGGAGAACTCAGCTTTTTCTCTGCAAATTCAAGAATCGATGATGTGTTGGATCGATTCGTCAATCTCAGTGTAGATGAACGAGAAAGGGCATTTGAAGGCGTTTTGTCGAAGATCAGAACGATCGGCGAGGCGGAAAATGTGGAGAAAATTCTCGAGGAAACCTTGAGGAAATTGCTTGCGCGCAAGCAAGTGCTCCAGCGGCAGTGCAATTCCTCTGAACCGTCGGCGGAACTTTTACGCGTACGTAACCCTAACCATCCACAGTTTACGTTTTCAGTATTTCAAAATTTCAGTCAGTGA

Coding sequence (CDS)

ATGGGGAGAGTGAAGCTTCCAATCAAGAAGATTGAGGACGTTTCCAGTCGTGGAGTCACTTTCTGCAAAAGGAAAAAGAGACTCATCAAGAATGCTTACGAATTATCTGTTCTCTGTGACATTGATATTGCTCTCATCATTCTCTCTCCCACCGGAGAACTCAGCTTTTTCTCTGCAAATTCAAGAATCGATGATGTGTTGGATCGATTCGTCAATCTCAGTGTAGATGAACGAGAAAGGGCATTTGAAGGCGTTTTGTCGAAGATCAGAACGATCGGCGAGGCGGAAAATGTGGAGAAAATTCTCGAGGAAACCTTGAGGAAATTGCTTGCGCGCAAGCAAGTGCTCCAGCGGCAGTGCAATTCCTCTGAACCGTCGGCGGAACTTTTACGCGTACGTAACCCTAACCATCCACAGTTTACGTTTTCAGTATTTCAAAATTTCAGTCAGTGA

Protein sequence

MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSANSRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNHPQFTFSVFQNFSQ

Homology

[Close]

BLAST of Spg016874 vs. NCBI nr
Match: EXC04824.1 (MADS-box transcription factor 3 [Morus notabilis])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-26
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ S +G +S FS N
Sbjct: 1   MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSSSGRVSLFSGN 60

Query: 61  SRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQR 119
             I+++L R+VNL   +R R FEG  S+I T+ EAE  EKILEETL+ +  RKQVL++
Sbjct: 61  KSIEEILARYVNLPDHDRGRIFEGDPSEITTLNEAEYREKILEETLKTVCIRKQVLEK 118

[Close]

BLAST of Spg016874 vs. NCBI nr
Match: XP_012851548.1 (PREDICTED: MADS-box protein GGM13-like [Erythranthe guttata])

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-23
Identity = 65/122 (53.28%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+AL++ SP+G +S FS N
Sbjct: 1   MGRVKLQIKKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALLMFSPSGRVSIFSGN 60

Query: 61  SRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQRQC 120
           S I++++ R+VNL   ER R +EG  S+I T  EA+  E++LEE L+++   + VLQ Q 
Sbjct: 61  SSIEEIMARYVNLPEHERGRIYEGDPSEITTFCEADYREQVLEENLKQI---RHVLQDQY 119

Query: 121 NS 123
            S
Sbjct: 121 TS 119

[Close]

BLAST of Spg016874 vs. NCBI nr
Match: KAF3630040.1 (MADS-box protein GGM13 [Capsicum annuum] >KAF3631908.1 MADS-box protein GGM13 [Capsicum annuum])

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-23
Identity = 61/113 (53.98%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G +S FS N
Sbjct: 1   MGRVKLQIKKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVSTFSGN 60

Query: 61  SRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARK 114
             I+D++ R+VNL   +R R +E    +I T+ EA+  E++L+ETL+++ ARK
Sbjct: 61  KSIEDIMARYVNLPEHDRGRMYEDDFCEITTVCEAQYREEVLQETLKQVQARK 113

[Close]

BLAST of Spg016874 vs. NCBI nr
Match: XP_007224359.2 (agamous-like MADS-box protein AGL104 [Prunus persica])

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-23
Identity = 71/145 (48.97%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           M RVKL IK+IE+ ++  VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G LS FS N
Sbjct: 1   MRRVKLQIKRIENTTNIQVTFSKRRSGLIKKAYELSVLCDVDVALIMFSPSGRLSLFSGN 60

Query: 61  SRIDDVLDRFVNLSVDER--------ERAFEGVLSKIRTIGEAENVEKILEETLRKLLAR 120
             I+++L R+VNL   ER        +R FEG LS++ T+ EAE  E+ILEETL++L  R
Sbjct: 61  KSIEEILARYVNLPEHERGRYKVPIIKRIFEGDLSEVTTLLEAEYREQILEETLKRLHVR 120

Query: 121 KQVLQRQCNSSEPSAELLRVRNPNH 138
           K +          +  LLR+R   H
Sbjct: 121 KVM----------NCFLLRIREEEH 135

[Close]

BLAST of Spg016874 vs. NCBI nr
Match: KAG5033996.1 (hypothetical protein JHK87_008906 [Glycine soja] >KAG5048193.1 hypothetical protein JHK85_009296 [Glycine max] >KAG5065315.1 hypothetical protein JHK86_009046 [Glycine max])

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-22
Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKLPIKKIE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G  +FFS N
Sbjct: 1   MGRVKLPIKKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRATFFSGN 60

Query: 61  SRIDDVLDRFVNLS------------------------------VDERERAFEGVLSKIR 118
             I+++L+R+VNLS                              +++R R FEG  S+I 
Sbjct: 61  KSIEEILERYVNLSEGEHGSSMTSDSQIEDLRREIFTCKSQLEEMEKRLRIFEGDPSEIT 120

[Close]

BLAST of Spg016874 vs. ExPASy Swiss-Prot
Match: Q9LM46 (Agamous-like MADS-box protein AGL104 OS=Arabidopsis thaliana OX=3702 GN=AGL104 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIALI+ SP+  LS FS  
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRLSLFSGK 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DV  RF+NL   ERE A
Sbjct: 61 TRIEDVFSRFINLPKQERESA 81

[Close]

BLAST of Spg016874 vs. ExPASy Swiss-Prot
Match: Q1PFC2 (Agamous-like MADS-box protein AGL66 OS=Arabidopsis thaliana OX=3702 GN=AGL66 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIAL++ SP+  LS FS  
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALLMFSPSDRLSLFSGK 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DV  R++NLS  ERE A
Sbjct: 61 TRIEDVFSRYINLSDQERENA 81

[Close]

BLAST of Spg016874 vs. ExPASy Swiss-Prot
Match: Q2QW53 (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS13 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGR ++ IK+IE+ +SR VTFCKR+  L+K AYELSVLCD ++ALI+ S  G L  +S N
Sbjct: 1  MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61 SRIDDVLDRF 71
          + +   +DR+
Sbjct: 61 NNVKATIDRY 70

[Close]

BLAST of Spg016874 vs. ExPASy Swiss-Prot
Match: A2Y9P0 (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica OX=39946 GN=MADS5 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGR K+ +K+IE+  SR VTF KR+  L+K AYELSVLCD ++ALII S  G L  FS +
Sbjct: 1   MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60

Query: 61  SRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQV- 120
           S +   L+R+     NL+  E   A E  LS  +   + +   + L+ T R LL    V 
Sbjct: 61  SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120

Query: 121 -----LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ 147
                L++  N  E S  L+ +R+  + Q    VF+
Sbjct: 121 LSLKELEQLENQIEIS--LMNIRSSKNQQLLDQVFE 154

[Close]

BLAST of Spg016874 vs. ExPASy Swiss-Prot
Match: Q0DEB8 (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS5 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGR K+ +K+IE+  SR VTF KR+  L+K AYELSVLCD ++ALII S  G L  FS +
Sbjct: 1   MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60

Query: 61  SRIDDVLDRF----VNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQV- 120
           S +   L+R+     NL+  E   A E  LS  +   + +   + L+ T R LL    V 
Sbjct: 61  SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120

Query: 121 -----LQRQCNSSEPSAELLRVRNPNHPQFTFSVFQ 147
                L++  N  E S  L+ +R+  + Q    VF+
Sbjct: 121 LSLKELEQLENQIEIS--LMNIRSSKNQQLLDQVFE 154

[Close]

BLAST of Spg016874 vs. ExPASy TrEMBL
Match: W9SG06 (MADS-box transcription factor 3 OS=Morus notabilis OX=981085 GN=L484_010247 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ S +G +S FS N
Sbjct: 1   MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSSSGRVSLFSGN 60

Query: 61  SRIDDVLDRFVNLSVDERERAFEGVLSKIRTIGEAENVEKILEETLRKLLARKQVLQR 119
             I+++L R+VNL   +R R FEG  S+I T+ EAE  EKILEETL+ +  RKQVL++
Sbjct: 61  KSIEEILARYVNLPDHDRGRIFEGDPSEITTLNEAEYREKILEETLKTVCIRKQVLEK 118

[Close]

BLAST of Spg016874 vs. ExPASy TrEMBL
Match: A0A498J906 (MADS-box domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_020649 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 69/150 (46.00%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALII S +G LS FS N
Sbjct: 165 MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIIFSSSGRLSLFSGN 224

Query: 61  SRIDDVLDRFVNLSVDERERAFEGV---------------------------------LS 118
             I+++L R++NL  + R R   G                                  LS
Sbjct: 225 KSIEEILARYINLPANRRGRPMSGTDSDQLEEIQQDIVCCKSKLEEMGNRLRIFEGEDLS 284

[Close]

BLAST of Spg016874 vs. ExPASy TrEMBL
Match: A0A2P5BDM0 (MADS-box transcription factor OS=Trema orientale OX=63057 GN=TorMADS29 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 68/148 (45.95%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IK+IE  ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G +SFFS N
Sbjct: 1   MGRVKLQIKRIESTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVSFFSGN 60

Query: 61  SRIDDVLDRFVNL------------------------------SVDERERAFEGVLSKIR 119
             I+++L R+VNL                               ++ R R FEG  S+I 
Sbjct: 61  KSIEEILARYVNLPEQEQGRPTSTDSQLEEIQQEILCVGSQLEEMENRLRIFEGDPSEIT 120

[Close]

BLAST of Spg016874 vs. ExPASy TrEMBL
Match: A0A2P5XKT0 (MADS-box domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16714 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IK+IE+ ++R VTF KR+  LIK AYELSVLCD+D+ALI+ SP+G LS FS N
Sbjct: 1   MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFSGN 60

Query: 61  SRIDDVLDRFVNL------------------------------SVDERERAFEGVLSKIR 120
             I+++L R+VNL                              ++++R R FEG  S+I 
Sbjct: 61  KSIEEILGRYVNLPEHERGSPESINPQLEEFQQEIINCKSRIANMEKRLRIFEGDASEIT 120

Query: 121 TIGEAENVEKILEETLRKLLARKQVLQRQCNSSEP 126
           T+ +A+  E+ILEETL+++   KQVL+ +  S  P
Sbjct: 121 TLIQADYHEQILEETLKQVRLHKQVLEEKYTSPGP 155

[Close]

BLAST of Spg016874 vs. ExPASy TrEMBL
Match: V7AVU2 (MADS-box domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G069300g PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.4e-22
Identity = 70/174 (40.23%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
           MGRVKL IKKIE+ ++R VTF KR+  LIK AYELSVLC +D+ALI+ SP+G  SFFS N
Sbjct: 1   MGRVKLQIKKIENTTNRQVTFSKRRNGLIKKAYELSVLCGVDVALIMFSPSGRPSFFSGN 60

Query: 61  SRIDDVLDRFVNL---------------------------SVDERERAFEGVLSKIRTIG 120
             I+++L+R+VNL                            ++ER R FEG  S+I T+ 
Sbjct: 61  KSIEEILERYVNLQSGEHGSTFRSCLEVRREIFTCKSQLKEMEERLRIFEGDPSEITTLR 120

Query: 121 EAENVEKILEETLRKLLARKQVLQRQCNSSEPSAELLRVRNPNHPQFTFSVFQN 148
           EAE  E +L +TL+++  RK VL+   + +  S ++   ++ +   F  S  +N
Sbjct: 121 EAEYREYVLRQTLKQVQLRKCVLEENNSEASHSPQVHGAKSVDVNNFVTSASKN 174

[Close]

BLAST of Spg016874 vs. TAIR 10
Match: AT1G77980.1 (AGAMOUS-like 66 )

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIAL++ SP+  LS FS  
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALLMFSPSDRLSLFSGK 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DV  R++NLS  ERE A
Sbjct: 61 TRIEDVFSRYINLSDQERENA 81

[Close]

BLAST of Spg016874 vs. TAIR 10
Match: AT1G22130.1 (AGAMOUS-like 104 )

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL IK+IE+ ++R VTF KR+  LIK AYELS+LCDIDIALI+ SP+  LS FS  
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRLSLFSGK 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DV  RF+NL   ERE A
Sbjct: 61 TRIEDVFSRFINLPKQERESA 81

[Close]

BLAST of Spg016874 vs. TAIR 10
Match: AT1G77950.1 (AGAMOUS-like 67 )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL +K+IE  ++R +TF KRKK LIK AYELS LCDID+AL++ SP+  L  FS  
Sbjct: 1  MGRVKLELKRIEKSTNRQITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLCLFSGQ 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DVL R++NL   ERE A
Sbjct: 61 TRIEDVLARYINLPDQERENA 81

[Close]

BLAST of Spg016874 vs. TAIR 10
Match: AT1G77950.2 (AGAMOUS-like 67 )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGELSFFSAN 60
          MGRVKL +K+IE  ++R +TF KRKK LIK AYELS LCDID+AL++ SP+  L  FS  
Sbjct: 1  MGRVKLELKRIEKSTNRQITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLCLFSGQ 60

Query: 61 SRIDDVLDRFVNLSVDERERA 82
          +RI+DVL R++NL   ERE A
Sbjct: 61 TRIEDVLARYINLPDQERENA 81

[Close]

BLAST of Spg016874 vs. TAIR 10
Match: AT1G18750.1 (AGAMOUS-like 65 )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 1   MGRVKLPIKKIEDVSSRGVTFCKRKKRLIKNAYELSVLCDIDIALIILSPTGE-LSFFSA 60
           MGRVKL IK++E  S+R VT+ KRK  ++K A ELS+LCDIDI L++ SPTG   +F   
Sbjct: 1   MGRVKLKIKRLESTSNRQVTYTKRKNGILKKAKELSILCDIDIVLLMFSPTGRATAFHGE 60

Query: 61  NSRIDDVLDRFVNLSVDERER----AFEGVLSKIRTIGEAENVEKIL---EETLRKLLAR 120
           +S I++V+ +F  L+  ER +    + E +    + +    N+   L    +T+  L  +
Sbjct: 61  HSCIEEVISKFAQLTPQERTKRKLESLEALKKTFKKLDHDVNIHDFLGARNQTIEGLSNQ 120

The following BLAST results are available for this feature:

BLAST of Spg016874 vs. NCBI nr


Match Name	E-value	Identity	Description
EXC04824.1	4.4e-26	57.63	MADS-box transcription factor 3 [Morus notabilis]	[more]
XP_012851548.1	1.2e-23	53.28	PREDICTED: MADS-box protein GGM13-like [Erythranthe guttata]	[more]
KAF3630040.1	1.6e-23	53.98	MADS-box protein GGM13 [Capsicum annuum] >KAF3631908.1 MADS-box protein GGM13 [C...	[more]
XP_007224359.2	4.5e-23	48.97	agamous-like MADS-box protein AGL104 [Prunus persica]	[more]
KAG5033996.1	1.7e-22	45.58	hypothetical protein JHK87_008906 [Glycine soja] >KAG5048193.1 hypothetical prot...	[more]

BLAST of Spg016874 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM46	5.8e-21	62.96	Agamous-like MADS-box protein AGL104 OS=Arabidopsis thaliana OX=3702 GN=AGL104 P...	[more]
Q1PFC2	5.8e-21	61.73	Agamous-like MADS-box protein AGL66 OS=Arabidopsis thaliana OX=3702 GN=AGL66 PE=...	[more]
Q2QW53	1.2e-13	51.43	MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
A2Y9P0	1.2e-13	37.82	MADS-box transcription factor 5 OS=Oryza sativa subsp. indica OX=39946 GN=MADS5 ...	[more]
Q0DEB8	1.2e-13	37.82	MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]

BLAST of Spg016874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9SG06	2.1e-26	57.63	MADS-box transcription factor 3 OS=Morus notabilis OX=981085 GN=L484_010247 PE=4...	[more]
A0A498J906	1.1e-22	46.00	MADS-box domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_020649 PE...	[more]
A0A2P5BDM0	1.1e-22	45.95	MADS-box transcription factor OS=Trema orientale OX=63057 GN=TorMADS29 PE=4 SV=1	[more]
A0A2P5XKT0	1.4e-22	43.87	MADS-box domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16...	[more]
V7AVU2	5.4e-22	40.23	MADS-box domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G06...	[more]

BLAST of Spg016874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77980.1	4.1e-22	61.73	AGAMOUS-like 66	[more]
AT1G22130.1	4.1e-22	62.96	AGAMOUS-like 104	[more]
AT1G77950.1	1.0e-20	59.26	AGAMOUS-like 67	[more]
AT1G77950.2	1.0e-20	59.26	AGAMOUS-like 67	[more]
AT1G18750.1	1.1e-14	37.01	AGAMOUS-like 65	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..119
None	No IPR available	PANTHER	PTHR11945:SF506	MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 76..125
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..74
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 76..125
None	No IPR available	PANTHER	PTHR11945:SF506	MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..74
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 63.66 coord: 38..59 score: 42.35 coord: 3..23 score: 48.4
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.0E-23 score: 94.8
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..55 e-value: 1.4E-19 score: 69.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 23.800892
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..92 e-value: 6.0E-21 score: 76.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016874.1	Spg016874.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding