Spg016046 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTCCCTGTCGGTGAATTTCCGGAGTTCCCCTTTTTCCCTCGCGAAATTCATACTCTTCGGAACGATCGTGTTTGAAATTTTCCGTCTATCGGAGTAATTTCGTCGAGTTCTCGCGAATTTCTCCGTTTCTTGTTCGCTGAAGGTACTGCTTCTCTCTCAAACAGGATCGAATCATCTAGGGTTTCATATGTTTGAATAACTTGTATGTTGTTCATCTTGTCGTCTATAGTTCTTGTTTGGCTTTGATTTTTGAAAGTAGGAGTAGTTTTTTATATCATTGTGTTATGCCGTCGTTGGTTGCTTTTGGTTTTTTCTGGTTTTTGATTTGGAATTTCGGTTTATTGAAATGGAAGTGGTGGATTTTATGTTTTGGTTTTTATGTAACTTTTGTTATTTTGATTATGATTTGTTATCGTTTCCCAGCTGCTTGCATCATTGTCGTTTTGATGGTATTCTCTTTGTTGAATTTTGTGTTCTTTTCTGTTGATGTTCGATTTGTGAGAATCCTGGAATAGTTTTCCTCATGTTTGAGTTGATTATTTAGTTTGAGGTGTGTCTTCATATCAAGCGGATCATGCTGAACTTTTCTTCGTTGGCTTGGTTTAAGTTTTTTTCATTCCCGTGCCTTTTCTTTTTTCCAGGATATATTTTTTTGTGAGCTGTAACGATGCATAGAAGGAGCAGAGGGGGAAGGGATGAATTTTTTGATTTCGGTGACCCCTTTGCTGGGTTTGGAGGCTTTCCGAGTCAAAGAGGCTTAGTATCTGGTTTCTTTGGTGGAAGGGATCCATTTGATGATCCCTTCTTCAGAAATCCTTTTGGAAGTGTGTTCGAGTCGAGCTTCTTTGGTGGTCCTGGAATTCCTTTTGCAAACATGCATGCGTCTGGATTCCTTGATCATCAGGCCCCTGAGCCTAAAAGACCAAGAGGCCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAAAGAGAGTAAAAATTCAAAGAAGTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGGTGAGGGTGAGACTTGTCTGGATTGTTTTGTTTGTATTCTTGCTTTGCTTGCTTTATGCATTTCCAGTGCAATCCATATTGCGGTATTGAATTGTTTCCTTTCTTGTTGTTACAGAGAAGGGGAACAAACATTTGCAGCTCATGGATCATCATAGTGGACCCAATCAAAGGCATGCCTGGCCTCAAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTACACTTCATCAAGGACGAGGAGGGCAGGGAGTGATGGTGTAAGTAACTTAAATGCCAGTTAGGAGTCGATTCTCCTTAGAAGATTTCTTTCCTCATTTGTCTATTTTTTGTAAATAGGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACAGCAACCAGACAAGCAACCCACAGAGTTTCAAGAGGACTTCAAAATAAGGTATCAACGAAGAAGATTTGTGACCCCCTGAGGATAATGCATTTCTCCATTTGAATCTATTAATCATCTATTTATGTTTTAAATCTTTGTTTGATACAATTTGTAAGAGTTTTTTTTAGGGTCATTCAATTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGGTATGCAACTATTCATGCTGAATTGTTGTGTGTTTGTGTAAACCGGATGCTTACAGTGGCAAACGTTTTGTTGTAAATCTACAGATGATCTAGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAATTTGCCTGGGTGGCCCGAAAGTTCAAGCGGCTTTGATAATATTGGTAATTATTATTATTACTACTACTACAGTGACTACTACTACTTTACTATTCAATTAGGTCTTACTTCCTCTATGATCTGATTCTTTTGTCTGCCTCCTCCTACGGTCCCACCTTTATTTTTATTTTGGAAAACTTGAGTGTTTAAGCTCATGATAGTGATGTTTTATGTAAAGGACGGACTTGAAGGTTCAAGAGACCAAATGTCCTTATCCTCAGTGGATGGGTTTAAGCAAACTACCCGAATGGGTAAACACAAGAGAATAAAACTTAAGTAGCTTGTCTTTGAACATAACTCTTCTAGAATGGTAATTATGGGAACCATGTTGCCCTAAACCTAGGATGAAATCAGAAATGGGAGAGGTTTTTGCAAAGGAAAGGTAACAGAGATTGAGAATAGGAAGTTTATAAAGGGGCCCATGGCTGATTCAAGAGAATACAAAAGCAAATACAAGTTTTGTCCTCCATCCATCGAGTAATGTAGTTAAGAAAGTGGGACGAACATAGGGAGATTACTTTCCAAGGTTTTTTTTTGCAGTTTCCTATACAAGTTCCCCGTCGTCCATGTATTTGTTTGGACCCAAGCTGCTCCATAACGAAGTGAGAGCCGCCACTCTCTAGCTGACTAAAGTCTACTCCAAACTTATTTCCTAAGCTGTGCAGGAACATTTGTCTGACCATTATGACTGCCTTCTGTAACCGTCTTTAATTAGGAGAATAAGTGAGAATTTTAGTTTTTGATATCTGTGGGTGTCCGGGCTGCTTGCATGCACCTTGACTAATCTCACAGGACAACCACCTGACCCTATTACATTTGGTTGTCAGGAAACACATAAGATATTAAATCTTAGGTAGGTGATAGATGAGAATATAAGAACAAAAATATCTTTCCAAGTGGCTTTTAGTAACAAAATAGTAAACAGTTCAAGGGAACTAAGCAGCGAAGCTATTACTATGGAACACCAGATAGCTACTGTAATTCTATGGGCACTAGGAAGGTATGCTAATTGCATTTTCTCCCTGTTGACAGCAGGTCGCATTGGCCAAAATGGTCAAACTAGCAGAGGTGGGTTGGCACTTCCCCCCAATCAGCATCCTCAGGTGGCTGGAAGAGCGGCTGTGGAAGGCTCCAGTAACCCGGGTTCCTCGCGCCCACAGCAAGTGAACAGGAATAGGAAAGATGCAAGTTACCGGAGTGCCTAAACTTACGAAATCGAAAGGATTTGGAAGGAGCTCTATGTTGCCTCTTTTGTGAATCCGTTCTTCCATTTCAGACGGATGTTCTTATCTGTGTGGAGTTCATAATTACTTACTGTCTTGCATATACCTTGAGACTAAATAGTTTCTGTCGATGAGCATTTCATCTCTCACCATTTACCATGACCACTAATTCTCATGTTGCGATTAGATGAATCTGATTGGTTTTGTTAGAAGAATGCCATTCTTAGAAATTGAATAAAGATATGTCTATATTTAGATGGTAATGTTTTGCGATCACCAAATTCAAAACCTTATACTACTAGTATGGG ATGCATAGAAGGAGCAGAGGGGGAAGGGATGAATTTTTTGATTTCGGTGACCCCTTTGCTGGGTTTGGAGGCTTTCCGAGTCAAAGAGGCTTAGTATCTGGTTTCTTTGGTGGAAGGGATCCATTTGATGATCCCTTCTTCAGAAATCCTTTTGGAAGTGTGTTCGAGTCGAGCTTCTTTGGTGGTCCTGGAATTCCTTTTGCAAACATGCATGCGTCTGGATTCCTTGATCATCAGGCCCCTGAGCCTAAAAGACCAAGAGGCCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAAAGAGAGTAAAAATTCAAAGAAGTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGAGAAGGGGAACAAACATTTGCAGCTCATGGATCATCATAGTGGACCCAATCAAAGGCATGCCTGGCCTCAAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTACACTTCATCAAGGACGAGGAGGGCAGGGAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACAGCAACCAGACAAGCAACCCACAGAGTTTCAAGAGGACTTCAAAATAAGGGTCATTCAATTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGATCTAGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAATTTGCCTGGGTGGCCCGAAAGTTCAAGCGGCTTTGATAATATTGCAGGTCGCATTGGCCAAAATGGTCAAACTAGCAGAGGTGGGTTGGCACTTCCCCCCAATCAGCATCCTCAGGTGGCTGGAAGAGCGGCTGTGGAAGGCTCCAGTAACCCGGGTTCCTCGCGCCCACAGCAAGTGAACAGGAATAGGAAAGATGCAAGTTACCGGAGTGCCTAA ATGCATAGAAGGAGCAGAGGGGGAAGGGATGAATTTTTTGATTTCGGTGACCCCTTTGCTGGGTTTGGAGGCTTTCCGAGTCAAAGAGGCTTAGTATCTGGTTTCTTTGGTGGAAGGGATCCATTTGATGATCCCTTCTTCAGAAATCCTTTTGGAAGTGTGTTCGAGTCGAGCTTCTTTGGTGGTCCTGGAATTCCTTTTGCAAACATGCATGCGTCTGGATTCCTTGATCATCAGGCCCCTGAGCCTAAAAGACCAAGAGGCCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAAAGAGAGTAAAAATTCAAAGAAGTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGAGAAGGGGAACAAACATTTGCAGCTCATGGATCATCATAGTGGACCCAATCAAAGGCATGCCTGGCCTCAAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTACACTTCATCAAGGACGAGGAGGGCAGGGAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACAGCAACCAGACAAGCAACCCACAGAGTTTCAAGAGGACTTCAAAATAAGGGTCATTCAATTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGATCTAGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAATTTGCCTGGGTGGCCCGAAAGTTCAAGCGGCTTTGATAATATTGCAGGTCGCATTGGCCAAAATGGTCAAACTAGCAGAGGTGGGTTGGCACTTCCCCCCAATCAGCATCCTCAGGTGGCTGGAAGAGCGGCTGTGGAAGGCTCCAGTAACCCGGGTTCCTCGCGCCCACAGCAAGTGAACAGGAATAGGAAAGATGCAAGTTACCGGAGTGCCTAA MHRRSRGGRDEFFDFGDPFAGFGGFPSQRGLVSGFFGGRDPFDDPFFRNPFGSVFESSFFGGPGIPFANMHASGFLDHQAPEPKRPRGLIIEEINSDDEKEAGKESKNSKKSSKEPLVEDPDDEEKGNKHLQLMDHHSGPNQRHAWPQTNSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTATRQATHRVSRGLQNKGHSITRKLNPDGKVDTMQTLHNLNGDDLESFENAWARNSRNLPGWPESSSGFDNIAGRIGQNGQTSRGGLALPPNQHPQVAGRAAVEGSSNPGSSRPQQVNRNRKDASYRSA Homology
BLAST of Spg016046 vs. NCBI nr
Match: XP_022923506.1 (uncharacterized protein LOC111431180 [Cucurbita moschata]) HSP 1 Score: 536.2 bits (1380), Expect = 1.9e-148 Identity = 272/321 (84.74%), Postives = 291/321 (90.65%), Query Frame = 0
BLAST of Spg016046 vs. NCBI nr
Match: XP_023541003.1 (uncharacterized protein LOC111801213 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 534.3 bits (1375), Expect = 7.4e-148 Identity = 272/320 (85.00%), Postives = 290/320 (90.62%), Query Frame = 0
BLAST of Spg016046 vs. NCBI nr
Match: XP_023005473.1 (uncharacterized protein LOC111498450 isoform X1 [Cucurbita maxima] >XP_023005474.1 uncharacterized protein LOC111498450 isoform X1 [Cucurbita maxima]) HSP 1 Score: 533.5 bits (1373), Expect = 1.3e-147 Identity = 271/320 (84.69%), Postives = 289/320 (90.31%), Query Frame = 0
BLAST of Spg016046 vs. NCBI nr
Match: XP_038876871.1 (uncharacterized protein LOC120069234 [Benincasa hispida]) HSP 1 Score: 533.1 bits (1372), Expect = 1.6e-147 Identity = 273/324 (84.26%), Postives = 291/324 (89.81%), Query Frame = 0
BLAST of Spg016046 vs. NCBI nr
Match: KAG7015642.1 (hypothetical protein SDJN02_23279 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 532.7 bits (1371), Expect = 2.2e-147 Identity = 271/321 (84.42%), Postives = 290/321 (90.34%), Query Frame = 0
BLAST of Spg016046 vs. ExPASy TrEMBL
Match: A0A6J1E6Z6 (uncharacterized protein LOC111431180 OS=Cucurbita moschata OX=3662 GN=LOC111431180 PE=3 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 9.4e-149 Identity = 272/321 (84.74%), Postives = 291/321 (90.65%), Query Frame = 0
BLAST of Spg016046 vs. ExPASy TrEMBL
Match: A0A6J1KZA1 (uncharacterized protein LOC111498450 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498450 PE=3 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 6.1e-148 Identity = 271/320 (84.69%), Postives = 289/320 (90.31%), Query Frame = 0
BLAST of Spg016046 vs. ExPASy TrEMBL
Match: A0A6J1HQ28 (uncharacterized protein LOC111465069 OS=Cucurbita maxima OX=3661 GN=LOC111465069 PE=3 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 1.2e-146 Identity = 270/321 (84.11%), Postives = 289/321 (90.03%), Query Frame = 0
BLAST of Spg016046 vs. ExPASy TrEMBL
Match: A0A6J1KXH8 (uncharacterized protein LOC111498450 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498450 PE=3 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146 Identity = 270/320 (84.38%), Postives = 288/320 (90.00%), Query Frame = 0
BLAST of Spg016046 vs. ExPASy TrEMBL
Match: A0A1S3BLG1 (uncharacterized protein LOC103490935 OS=Cucumis melo OX=3656 GN=LOC103490935 PE=3 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144 Identity = 267/321 (83.18%), Postives = 283/321 (88.16%), Query Frame = 0
BLAST of Spg016046 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein ) HSP 1 Score: 221.1 bits (562), Expect = 1.3e-57 Identity = 156/349 (44.70%), Postives = 191/349 (54.73%), Query Frame = 0
BLAST of Spg016046 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein ) HSP 1 Score: 221.1 bits (562), Expect = 1.3e-57 Identity = 156/349 (44.70%), Postives = 191/349 (54.73%), Query Frame = 0
BLAST of Spg016046 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 174.1 bits (440), Expect = 1.8e-43 Identity = 111/238 (46.64%), Postives = 141/238 (59.24%), Query Frame = 0
BLAST of Spg016046 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-26 Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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