Spg016039 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016039
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein cornichon homolog 4-like
Location	scaffold6: 43339354 .. 43343482 (-)
RNA-Seq Expression	Spg016039
Synteny	Spg016039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTACTCACTCAATCACTCACAACCCAATCAATACAAGTTATTAAATAGATAACATAATATCGAGAATATCTCCTTTTGATTTCCTGCCTCCTTTAAACAATAAGATGTCGAACTCATGACCAAGGAGTTGAAATTATCTTTAGTCCGCCCTCTAGGCCAACAAGCTACAAGACCATTCAGTGGGAAACTTGTGAGATTAATATTTTTGTTTTTTCTTTGTAGACTATAATTTTGCCTTTTTAAATTTGATTTCCAAGAAGTCGCAAAGCTTTTTTTGGCTCAAGATTTGAAAGTTGACTCACTAACGATCCGCGCGGCGGCGCTCGTCAACGTCGAGTCCTTCCGGTCATCCAAAGCCACTTTCCAATTCATCCTTCACGAGAAACCTGCGTGTGTTTTCAGCCCTAATCTCTTTCTACTGCAATCTTCACTTAGCCGCCATCTTGCTCGGAAATGGTGTTGCTTCAATCACTCTGTTCGCCTTGACCCAAAAATCACTGCTAATCTTGCTTCATAGACCGCGGAAGGGGAGAGGAGCCGAGGAGGAGCATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGGTAAATTCGAAACCCTAACTCCTATGTTTATGTCGCATTATCTTCAGTTCGAGTTGGGAAAGTAGAATCAATTTGAGTCAAAGACGGTTTAGATCAAAATTTCTACATTTCCAACCATTTCTGAATGTTAATTTGAAGTATATGAGCACTTCGATACGCGTTTTGTTCAGCTTGGAGAGATTAGGGTTTAGTTCAGTTATATTCACATATTCTTCTTCGCTTGTCAATTTGGAAGTACTTTTTAAAGAAACCGTAAATTTCGTAGTGCACCTTGGATTGGATTTGTATTGAGTGCTCCAGTAGTGGCCGGTGATCCTTTTTTTTTTTTGGTTATTATTATTATTTTTCTTTGGATTCCGCATCGAATTATCAATTGCATGTCATGCTCTCTAGCTTTCTTGTTTTAATAATTTGCACTTTTGATTGCTTTCCCCTAATTTCTTGAAAAGATTCTGAGATCAGGGTTTTGCTGGCGGTAAATTGTTTTAAGTTTATTTATGAATACCTATCCTTTTGATCTCATTTGTTATGAGTAAAGTATAACTAAAGTTAAAATTTAAGAATATATAATCTGCTTCCTCTGGGCTGCTTTTGATTCTTGGCATATAGAATTGAAAGATTATGGATGCAATGAGTCACTATAACATGTTGACTGATTCTTAGTTTGAATATTTATTATGGCCCTGAAATTTCTAATGTTGATCTTCAGAGTATCTATTGGTAGAAGCTCAATTTTCAAAGAGGCTAGAAATGACTAATGAGCTTCTACTGAAACATATTCAAAATTTTTAAACCACAGTTTAGGAGTTGTTCAAATCAAGTTTTCCTTTTGTATGAACATATCACTTGCCTCTCTTTGAACTTTTTAAGTATGAAAGATCAAAATTCAAGTTCTTGTTTATTAAATTTATTATTATCTTTATTTTGTGTGTAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGATTTGTGGGCCCTACATATATTATAATGTGAAACTGTAAGTGTTTTCATCCCTCACCTTTGATTGAACTTATTATCTTAATCAAATAACATCTGTTACAATTTTTGTGCACAAAGCTACAAAGATGCCAAGGGATAACCATACTTGCATGATTTTAATGTATTATACTTTTTAACCAAAGAAACACATGATTCGGACAGTTTGAATATAAAAGAAATTTGCTTCTGATTTTGACCATTTAGAAACAACAGAGCCTCCCATTGATTTGACCCTGTTATCTGTTAAGTAATACTTGATGTTGCATTTGATGATTATTCTTAAAGCGATCTACCTCGTAAGGATGGGCTTTCTGTCACTGTCAGGGCATAGCTTAGGTCGGGTTGGTGTATGGTTGTAAGCTACGGCTGCATACAACTGTAGTTTGGATGTGATAGGAGACGCTATTTGGAGAATATATATTGATTCTAATTAAGTTTCTAGTACATATTATATTATCGGAGAAAGGAATCTTAACTGCCTTTGATTTGTTGTATAAGGTATAGTGATGGAGCTTGCTTTGTTTCCATCTCAGAAAATATATGTGTTAGTGTAGAGTAGTCGCGGAACTTCCTTGGTTGAAGAACTAGTTTACCATGCATTGCAGCCATCAGTTTCTGTATTTGGAAGTATTCTCGATTCTCGAGGAGGACTAGAATCAAGGAACACCAAAATTAAAGTTGTTTGATGTTGGACTATGATACTGTATGATTGAGTGGTTAAGGCATCGTTCAAAATAAATGAGGCAGAATTCTGCTCTGGCTCAATGTTGAGGTGTATCTTATACCAGGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCTGAATGGTTAGGTCATAGGTGGTCGTGGCCCTATTTGTTACATTTTTACAGCTCCACAGGATATTGATAGAAACCAAAGAACTGAAATTTTATTAAAAGGTAAACGGGTTATAATGTTCAAGGTACCTGGAACATTCCTCTTGAGTATTCCCAAGACCAAACCAGCTAAACTATTCCCTACCTTCATCTCTGCTCACTCCCTACAACCGTAATCAACTCCTTTGCTATATGAGTACAACCAATGTGGAGATGAGGATTTGAACTTTCGACCTCAAAGGAAGAAATAGATACCATAACCACTAAGTTATGCCTTTAACTCTTTTGTTGATTACTAATATGCTCCTACTATCCTATTAATAATATTAATATTTAAAATGGAATTCCTAACATTACCCTACCCTTGAAACACACCTTGATCTTATCTGCATAGAGATATTCATTAGTCTTTTCTTGTGATCAGGTACCTACGAAGACAGCACCTGGTAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGGCTATTCAAACTAGCTTATTTAGTTTTCCTCCTCTTCCTCTCTATATTTTGGTACTCGGAGATGGGAAAGATTTTTCATGCTATTGTTCTTGTGCTTTCTTTATCCTGAATGCCTCTGACCAAGTTCACCTTATTGTCATTGCAGGATGATATATTATGCTTTGGAAGATGATGAATGAATAGAAACAATTGCTCGAGTGCAGTTCATTGTATCTTAACGGCTGATGCCATCAGTTGTGAGTTGAATTTCTATCCTTCAATGCCTTTTTCTGAAGCTGCTGGATTTCGCAGATTTCCGTGACATTCTTGTTGGGCTAGGAACTTCATTTCTATTTTGGAGAGAGGTTTAGAAGCAGCTTGAGTGGCTTGAATTCGCATCTTCCCCACTTTAAATTAGGCTCGTCAATACTGTTCTGTTAAGTACTTTTCATGGTTGGAATGACTATTATGAATGATGTATCTCTCTCACACACACGCCCGCCAGCAAACACATTTAGGCAATGGCATTTCCTTTGCGACTTTGAAGGCAATTTATAATGATGCTATGGAGGACTTTGAGTTGCAGAGGGAACAAGTGTTTGAGGCTCACATTCTTTAGTCATTGTTTCTTGTGATTTTTCTTCTAGTAATCAGTAGAAAATCATGTTTGAGAAAATTTTGTTCTCCCCGAGAAGAGGAACAACCATTGTATCTGTTACGACTCCGTGGCTTCTTTTAATTCATTTCCCCCAACTTTTGAAATGTGTCCAGTCGTTTGATTCATTTTGAGGTTCCCAAAATCCATTGGGATTTAAGTATTTCACTGGCTTTTGGCCCTTTAGTCTCCGATGGATTGATTCGTTTGTTGTCCCTATATTTGAGTATGGGACTAGAATTTCTGTTTGTGAAATGTGACCTTGACCTTGGAATTGGTTTGATGATTTTGTTTTCTTGCTTTCATCTTTGCATATTCAGACTACAACGATTTAACTCAGATTTCTTTGGCATTTCTTAA

mRNA sequence

ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGATTTGTGGGCCCTACATATATTATAATGTGAAACTGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCTGAATGGTTAGGTACCTACGAAGACAGCACCTGGATGATATATTATGCTTTGGAAGATGATGAATGA

Coding sequence (CDS)

ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGATTTGTGGGCCCTACATATATTATAATGTGAAACTGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCTGAATGGTTAGGTACCTACGAAGACAGCACCTGGATGATATATTATGCTTTGGAAGATGATGAATGA

Protein sequence

MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYLPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

Homology

[Close]

BLAST of Spg016039 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 7.2e-41
Identity = 94/141 (66.67%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIYYALEDDE
Sbjct: 121 ----LFLSVFWMIYYALEDDE 136

[Close]

BLAST of Spg016039 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.6 bits (449), Expect = 7.2e-41
Identity = 94/141 (66.67%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLVDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIYYALEDDE
Sbjct: 121 ----LFLSVFWMIYYALEDDE 136

[Close]

BLAST of Spg016039 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40
Identity = 95/141 (67.38%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVI+PEF+S+GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVILPEFVSVGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMSMICGPYIYYNV+L  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSMICGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIY ALEDDE
Sbjct: 121 ----LFLSIFWMIYSALEDDE 136

[Close]

BLAST of Spg016039 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-40
Identity = 93/141 (65.96%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIYYALEDDE
Sbjct: 121 ----LFLSVFWMIYYALEDDE 136

[Close]

BLAST of Spg016039 vs. NCBI nr
Match: XP_008448916.1 (PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 2.7e-40
Identity = 94/141 (66.67%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           M DLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEF++MGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIY+ALEDDE
Sbjct: 121 ----LFLSIFWMIYHALEDDE 136

[Close]

BLAST of Spg016039 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-34
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           +FYLLTGHW M+++C PY+YYN  L SK     D+  I+          L  +A++    
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIV--- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
             L  +    WMIY AL+D E
Sbjct: 121 --LNLFLTIFWMIYSALDDYE 136

[Close]

BLAST of Spg016039 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYLPAIAFMPQLPEW-------- 120
           +FYL+TGHW M+++C PY+YYN  L S+     D+  I+         L +W        
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIF--------NLLDWEKKKRLFK 120

Query: 121 -----LGTYEDSTWMIYYALEDDE 132
                L  +    W+IY  L+D E
Sbjct: 121 LAYIILTLFLTIFWLIYSTLDDYE 136

[Close]

BLAST of Spg016039 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-26
Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVKLKSKHSKNDDILVIY----------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE 132
           N  L SK     D+  I+          L  +A++      L  +    WMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIV-----LNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Spg016039 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-25
Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY 100
           L+Y+LTGHW M+++  P+++YN++L  K     D+  +Y
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELY 99

[Close]

BLAST of Spg016039 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.9e-18
Identity = 41/97 (42.27%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 3   DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLF 62
           DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY 100
           +LLT HW   ++  P   Y+  L  +     D+  ++
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVF 100

[Close]

BLAST of Spg016039 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.5e-41
Identity = 94/141 (66.67%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIYYALEDDE
Sbjct: 121 ----LFLSVFWMIYYALEDDE 136

[Close]

BLAST of Spg016039 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.0e-40
Identity = 93/141 (65.96%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIYYALEDDE
Sbjct: 121 ----LFLSVFWMIYYALEDDE 136

[Close]

BLAST of Spg016039 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 94/141 (66.67%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           M DLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEF++MGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIY+ALEDDE
Sbjct: 121 ----LFLSIFWMIYHALEDDE 136

[Close]

BLAST of Spg016039 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 91/141 (64.54%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFI++GVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIY ALEDDE
Sbjct: 121 ----LFLSIFWMIYSALEDDE 136

[Close]

BLAST of Spg016039 vs. ExPASy TrEMBL
Match: A0A6J1E6H8 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEF+++GVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAIGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           LFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+          L  +A++  L 
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFL- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
                +    WMIY ALEDDE
Sbjct: 121 ----LFLSIFWMIYSALEDDE 136

[Close]

BLAST of Spg016039 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 144.4 bits (363), Expect = 6.3e-35
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLP 120
           +FYLLTGHW M+++C PY+YYN  L SK     D+  I+          L  +A++    
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIV--- 120

Query: 121 EWLGTYEDSTWMIYYALEDDE 132
             L  +    WMIY AL+D E
Sbjct: 121 --LNLFLTIFWMIYSALDDYE 136

[Close]

BLAST of Spg016039 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-29
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYLPAIAFMPQLPEW-------- 120
           +FYL+TGHW M+++C PY+YYN  L S+     D+  I+         L +W        
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIF--------NLLDWEKKKRLFK 120

Query: 121 -----LGTYEDSTWMIYYALEDDE 132
                L  +    W+IY  L+D E
Sbjct: 121 LAYIILTLFLTIFWLIYSTLDDYE 136

[Close]

BLAST of Spg016039 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-27
Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVKLKSKHSKNDDILVIY----------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE 132
           N  L SK     D+  I+          L  +A++      L  +    WMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIV-----LNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Spg016039 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 1   MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
           MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY 100
           L+Y+LTGHW M+++  P+++YN++L  K     D+  +Y
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELY 99

[Close]

BLAST of Spg016039 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 91.3 bits (225), Expect = 6.3e-19
Identity = 41/97 (42.27%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 3   DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLF 62
           DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY 100
           +LLT HW   ++  P   Y+  L  +     D+  ++
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVF 100

The following BLAST results are available for this feature:

BLAST of Spg016039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005595.1	7.2e-41	66.67	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	7.2e-41	66.67	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038876883.1	1.6e-40	67.38	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_022943501.1	2.1e-40	65.96	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_008448916.1	2.7e-40	66.67	PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1...	[more]

BLAST of Spg016039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	8.9e-34	53.90	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.2e-27	45.83	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	4.0e-26	50.83	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	5.8e-25	51.52	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	8.9e-18	42.27	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Spg016039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	3.5e-41	66.67	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1FRW5	1.0e-40	65.96	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	1.3e-40	66.67	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A6J1HL36	1.1e-39	64.54	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]
A0A6J1E6H8	1.5e-39	63.83	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 P...	[more]

BLAST of Spg016039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	6.3e-35	53.90	Cornichon family protein	[more]
AT1G62880.1	8.8e-29	45.83	Cornichon family protein	[more]
AT1G12340.1	2.8e-27	50.83	Cornichon family protein	[more]
AT4G12090.1	4.1e-26	51.52	Cornichon family protein	[more]
AT3G12180.1	6.3e-19	42.27	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..99 e-value: 4.6E-25 score: 99.3
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..88 e-value: 2.2E-26 score: 92.6
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016039.1	Spg016039.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane