Spg015979 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015979
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 40746213 .. 40747910 (-)
RNA-Seq Expression	Spg015979
Synteny	Spg015979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACGAGAGCAAGAAACGAGCGAGACAATGAGGAGGAGGAGGTGCCTGTTACCCCCGAAGCACAGAAAGTGAAAGCAAAGAAAAAGAAAACGCTGGAGGAGAAAGAAGCCAAAAGAAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAATTGTACAGAAGGTAGTGGAAGATGTTGCTGCTACGATAGTTGAAGAAGAAAATACAAAAGAACTAGAAGGACAGAACACTGAGTCGATTGACCCGATAGTTCCGGATACGGAGGGAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAACAAGCCGAGGATGCACAAGAGGATAGGACAGAGGATGTTCAGGAAACAGGCAATGAGCAGGTGGAACAAGAGCAGGAGGCTCGAGTGGAGGTGATCATGCCGGAAGAGCCAAAACATCGCCGCATGAAGCGAAAAGCTGGACGTGTCAAGGTAGTCCGAACTGATACCCCATCACCACTGTCGACGGATTCTAAGAAAGAAAATGCAGAAAGAGAGGAACAGGAGAAAAAGGAGGCTGAGGACAGAGTGAGAGAGGAAGCAGGAAAGAAAGCAGCGGAAGAAACTTTGACAAAGCATCAAGAAGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTATAGAGGAAACAGAAGAAGGACCATTCATCCGCTTCGTCAATGAACTTGCCCGAGCAAAATATCGGGAGATGTTAAAAAGGGATTTCTTATTCGAGAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGGGCAGGGATCGCGAATCACGACTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAACATTGTTCGAGAGTTTTATGCGAATGTTGATAATGCAGAGGAATTTCAGGCAATAGTCCGAGGAGTGACTGTTAACTGGAGCCCAGGAGCTATTAATTCATTATTCAACCTCCAGGACTTCCCACACGCACGCTTCAATGAGATGGTGGTGGCACCATCGAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCAGTGGAGGCTATGAAAGATGGAGAAGCGCACATTTCAAGCTGCCTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATTAAACTGCGTTTGCTCCCAACTACGCATGATTCAACAGTGTCTCGCGACCGAGTGCTTCTGATATTTGCAATTCTTCGATCCTTAAGTATTGATGTTGGAAAAATCATTTCGAATGAAATTTTTAGTTGCTGGCGAAAAAAGGTGGGGAAGTTGTTTTTCCCGAACACGATCACGATGTTGTGCAGCAGGGCAGGAGTGCCCACGGTTCTAGAGGATGTGGTTTTGCTTGACAAGGGAATCATTGATATGCCTAATTTGGCTCGGCTTCAGCGTACGCAAGAGGCACGCCAGGGTGGACTAGTGTGTGGAATTCATCAAATCCTAGAGCAACTGGCACTGTCGGCCAGTAGGCAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGATACACTTCGGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTATGTTTTCCGACGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCAAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAGGAGGACTGA

mRNA sequence

ATGGCGAAAACGAGAGCAAGAAACGAGCGAGACAATGAGGAGGAGGAGGTGCCTGTTACCCCCGAAGCACAGAAAGTGAAAGCAAAGAAAAAGAAAACGCTGGAGGAGAAAGAAGCCAAAAGAAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAATTGTACAGAAGGTAGTGGAAGATGTTGCTGCTACGATAGTTGAAGAAGAAAATACAAAAGAACTAGAAGGACAGAACACTGAGTCGATTGACCCGATAGTTCCGGATACGGAGGGAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAACAAGCCGAGGATGCACAAGAGGATAGGACAGAGGATGTTCAGGAAACAGGCAATGAGCAGGTGGAACAAGAGCAGGAGGCTCGAGTGGAGGTGATCATGCCGGAAGAGCCAAAACATCGCCGCATGAAGCGAAAAGCTGGACGTGTCAAGGTAGTCCGAACTGATACCCCATCACCACTGTCGACGGATTCTAAGAAAGAAAATGCAGAAAGAGAGGAACAGGAGAAAAAGGAGGCTGAGGACAGAGTGAGAGAGGAAGCAGGAAAGAAAGCAGCGGAAGAAACTTTGACAAAGCATCAAGAAGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTATAGAGGAAACAGAAGAAGGACCATTCATCCGCTTCGTCAATGAACTTGCCCGAGCAAAATATCGGGAGATGTTAAAAAGGGATTTCTTATTCGAGAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGGGCAGGGATCGCGAATCACGACTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAACATTGTTCGAGAGTTTTATGCGAATGTTGATAATGCAGAGGAATTTCAGGCAATAGTCCGAGGAGTGACTGTTAACTGGAGCCCAGGAGCTATTAATTCATTATTCAACCTCCAGGACTTCCCACACGCACGCTTCAATGAGATGGTGGTGGCACCATCGAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCACAGGGCAGGAGTGCCCACGGTTCTAGAGGATGTGGTTTTGCTTGACAAGGGAATCATTGATATGCCTAATTTGGCTCGGCTTCAGCGTACGCAAGAGGCACGCCAGGGTGGACTAGTGTGTGGAATTCATCAAATCCTAGAGCAACTGGCACTGTCGGCCAGTAGGCAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGATACACTTCGGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTATGTTTTCCGACGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCAAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAGGAGGACTGA

Coding sequence (CDS)

ATGGCGAAAACGAGAGCAAGAAACGAGCGAGACAATGAGGAGGAGGAGGTGCCTGTTACCCCCGAAGCACAGAAAGTGAAAGCAAAGAAAAAGAAAACGCTGGAGGAGAAAGAAGCCAAAAGAAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAATTGTACAGAAGGTAGTGGAAGATGTTGCTGCTACGATAGTTGAAGAAGAAAATACAAAAGAACTAGAAGGACAGAACACTGAGTCGATTGACCCGATAGTTCCGGATACGGAGGGAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAACAAGCCGAGGATGCACAAGAGGATAGGACAGAGGATGTTCAGGAAACAGGCAATGAGCAGGTGGAACAAGAGCAGGAGGCTCGAGTGGAGGTGATCATGCCGGAAGAGCCAAAACATCGCCGCATGAAGCGAAAAGCTGGACGTGTCAAGGTAGTCCGAACTGATACCCCATCACCACTGTCGACGGATTCTAAGAAAGAAAATGCAGAAAGAGAGGAACAGGAGAAAAAGGAGGCTGAGGACAGAGTGAGAGAGGAAGCAGGAAAGAAAGCAGCGGAAGAAACTTTGACAAAGCATCAAGAAGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTATAGAGGAAACAGAAGAAGGACCATTCATCCGCTTCGTCAATGAACTTGCCCGAGCAAAATATCGGGAGATGTTAAAAAGGGATTTCTTATTCGAGAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGGGCAGGGATCGCGAATCACGACTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAACATTGTTCGAGAGTTTTATGCGAATGTTGATAATGCAGAGGAATTTCAGGCAATAGTCCGAGGAGTGACTGTTAACTGGAGCCCAGGAGCTATTAATTCATTATTCAACCTCCAGGACTTCCCACACGCACGCTTCAATGAGATGGTGGTGGCACCATCGAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCACAGGGCAGGAGTGCCCACGGTTCTAGAGGATGTGGTTTTGCTTGACAAGGGAATCATTGATATGCCTAATTTGGCTCGGCTTCAGCGTACGCAAGAGGCACGCCAGGGTGGACTAGTGTGTGGAATTCATCAAATCCTAGAGCAACTGGCACTGTCGGCCAGTAGGCAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGATACACTTCGGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTATGTTTTCCGACGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCAAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAGGAGGACTGA

Protein sequence

MAKTRARNERDNEEEEVPVTPEAQKVKAKKKKTLEEKEAKRRRRQQRAEDQEIVQKVVEDVAATIVEEENTKELEGQNTESIDPIVPDTEGVQEEHTEEVQEKQAEDAQEDRTEDVQETGNEQVEQEQEARVEVIMPEEPKHRRMKRKAGRVKVVRTDTPSPLSTDSKKENAEREEQEKKEAEDRVREEAGKKAAEETLTKHQEDRGKGIVEASDEPIEETEEGPFIRFVNELARAKYREMLKRDFLFERGFGDDLPHFLRAGIANHDWSQFCAKPDPVNSNIVREFYANVDNAEEFQAIVRGVTVNWSPGAINSLFNLQDFPHARFNEMVVAPSSDQLNAAVREVGIEGAHRAGVPTVLEDVVLLDKGIIDMPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEFAERQAQTYWTYAKRRDDTLRRALQSNFSKPYQAFPMFSDDLFNLWIPPPPVKREEEDDENEQGQED

Homology

The following BLAST results are available for this feature:

BLAST of Spg015979 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015979 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015979 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015979 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..54
None	No IPR available	COILS	Coil	Coil	coord: 165..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015979.1	Spg015979.1	mRNA