Spg015882 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015882
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 45024823 .. 45026454 (+)
RNA-Seq ExpressionSpg015882
SyntenySpg015882
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTGATTATAGGTAATTATTATCTTACTCAATATATTGATTATCACATAAATTATAAATATATTTGATTATTATTATCAGAGTCAATTACGTTTGAGATATGTAAGATCTTCATATGCATAAGCTCATTGTTTAGTGTAGGGTGACAAACCAAGCAAGAGAATATAGTTGGTTAAGTTGAAATTTACTTAGAAATATATGGATGTTAAGAGTGATAATTAAATAAGTATTTTCTATACAAAACTCGATATAAACGTGTCATAAATAATATTTAAATTGAAAAAAAAATGATGAGATCTAGAAAGCGTTATGATTGCTCAACAAAGTAGCCAACACAAATAAACAATTAAATCAAAATATATATCATTGATTATAGAATTATACAAAACTAAATAGTGATTTCTTATCAACGATTAACATGTCTTTAGTTATCCAAGTCATGCTTTTAATTCTTTTTTAAAGATTTCATGTTTCAAAAGAATCAATGCACGGTAGATAAAATATCGTGCTCTTTCGACATCCAATGGTTTAAAGGTCAACAAATTTGAAGTTTATAGATAAAAATTATTCGTGTACATCCTTAACTATCATTTTTGTCACAAAATTCTTATCAATATAATTAAATATGAAAGATTTTGTCAATAATGTAATATTAATGTTGACTTTAGATGTATTATTGAATATTATTGTAACGCCCATAATTGAAGGAAAATTCAAATCTCCTTAGTTTGGAGTTGATTTGGAGTTAAGATGGAAATTTTCAAAGATTAAAAGGAGGGAAATTGGTGGAGTTTTAATAATTCAAAGCTGCAGTGGCATTGTTGAAATTTAGGTGAATTAAGAGCCAAGCCCAAGCCCATTAGGTCTTCATTTAGCCACTCACGCAGCCCTAGGTTAGTACCTTCTTCATCCCTTCTTTCTTCTCCACGAGTAGCAGCCGACCAGCCCCCTTTTTGCGATTTTCTTCTCCAAACCGTGGGGTTCACTGAGTTTTCCGGCAAGTTCCCTCACCGACGACAGCAACGGCGGCGACGTCTCGGTCTCAGCGGCGGCGGCGTCTCGTCTCAGCAGCGGCGGCGTCTTGTTCGTGGCAGCGTAGCAGCGGGCAGCGACGTAGCAACAGATCAGGTACTCTTCTCCGGCGGCGCGCGTCTCTCCGGTGATATCCTCCACGGCGGTGCGGCAGCAGTGCAGCGGCGGCGTTTGGTTGGAGTTTCGCGGCAGCTTCCGACGGCAGCAACTTCTCCGGTGAGCGGCGACGCAAATAGTAGTGTTTTGGGTCGTTTTTCGGCGTTTTCGACGTGTTTAAGCAGTGGGTCTTTTAGTTCCTTAATTTCCAGCAATTTTGGTAATTGGGTAAGTGATTTTCAGCAAGGTTGAGGTTGATTTTGAAGTTTATTTGATTACCCATTAGTTTGGTTATTGATTTCAAGGTACCCATATCGATTAGGAAGTAAGAGTGATTTTGGAACTCCATTCAGCAAGCATCGCTCAACCTTGACTTGGTTAAAGGTCTTGAAGCTAAGGAATTTATTTAGATTTTTGTAAGATTATTAAGTCGAGGTAAGTGAACTTACTATTGAACCTTTCAATTGGGTGCGCGTGTTTGATTTTTTTCTAAAATACTC

mRNA sequence

ATGGTCGTGATTATAGGTGAATTAAGAGCCAAGCCCAAGCCCATTAGGTCTTCATTTAGCCACTCACGCAGCCCTAGGTTAGTACCTTCTTCATCCCTTCTTTCTTCTCCACGAGTAGCAGCCGACCAGCCCCCTTTTTGCGATTTTCTTCTCCAAACCGTGGGGTTCACTGAGTTTTCCGGCAAGTTCCCTCACCGACGACAGCAACGGCGGCGACGTCTCGGTCTCAGCGGCGGCGGCGTCTCGTCTCAGCAGCGGCGGCGTCTTGTTCGTGGCAGCGTAGCAGCGGGCAGCGACGTAGCAACAGATCAGGTACTCTTCTCCGGCGGCGCGCGTCTCTCCGGTGATATCCTCCACGGCGGTGCGGCAGCAGTGCAGCGGCGGCGTTTGGTTGGAGTTTCGCGGCAGCTTCCGACGGCAGCAACTTCTCCGGTGAGCGGCGACGCAAATAGTAGTGTTTTGGGTCGTTTTTCGGCGTTTTCGACGTGTTTAAGCAGTGGGTCTTTTAGTTCCTTAATTTCCAGCAATTTTGGTAATTGGGTACCCATATCGATTAGGAAGTAA

Coding sequence (CDS)

ATGGTCGTGATTATAGGTGAATTAAGAGCCAAGCCCAAGCCCATTAGGTCTTCATTTAGCCACTCACGCAGCCCTAGGTTAGTACCTTCTTCATCCCTTCTTTCTTCTCCACGAGTAGCAGCCGACCAGCCCCCTTTTTGCGATTTTCTTCTCCAAACCGTGGGGTTCACTGAGTTTTCCGGCAAGTTCCCTCACCGACGACAGCAACGGCGGCGACGTCTCGGTCTCAGCGGCGGCGGCGTCTCGTCTCAGCAGCGGCGGCGTCTTGTTCGTGGCAGCGTAGCAGCGGGCAGCGACGTAGCAACAGATCAGGTACTCTTCTCCGGCGGCGCGCGTCTCTCCGGTGATATCCTCCACGGCGGTGCGGCAGCAGTGCAGCGGCGGCGTTTGGTTGGAGTTTCGCGGCAGCTTCCGACGGCAGCAACTTCTCCGGTGAGCGGCGACGCAAATAGTAGTGTTTTGGGTCGTTTTTCGGCGTTTTCGACGTGTTTAAGCAGTGGGTCTTTTAGTTCCTTAATTTCCAGCAATTTTGGTAATTGGGTACCCATATCGATTAGGAAGTAA

Protein sequence

MVVIIGELRAKPKPIRSSFSHSRSPRLVPSSSLLSSPRVAADQPPFCDFLLQTVGFTEFSGKFPHRRQQRRRRLGLSGGGVSSQQRRRLVRGSVAAGSDVATDQVLFSGGARLSGDILHGGAAAVQRRRLVGVSRQLPTAATSPVSGDANSSVLGRFSAFSTCLSSGSFSSLISSNFGNWVPISIRK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015882.1Spg015882.1mRNA