Spg015756 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015756
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor MYB34
Locationscaffold10: 19108867 .. 19111749 (-)
RNA-Seq ExpressionSpg015756
SyntenySpg015756
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCGGCCTACTTTGCGAATGAGGCAAACAACGTGATCCTGGATCGTTCATCTAGAGACATGCAAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGACAGGTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTATTTTGTGTGTCATTTGTGTTAAATATGGTTGCTTTTAGATGAATATTATATGTTTTAACCCATTTGGAAGAATGGAGGCTTTGGAAGTTATTTTGTGCAGAAAATATTGCTGAGCGACTTGAGAGAGCAATTTCCATGATCGAGCAAAACTGGGAGCAAAACTGCCACATAACAGCTCGTTATCCATTTTAATAAAGTGGCGTTAGCTGAATGAATTACGGATCTAAGAAGCCTGGAGAGCCTGCAACATGTCCAATTCAACCTAATTAGGTTAAACCTCGTCTTATAAAAGGAGTAGCCATCAAAGATAAAGTCATTCACGATTGGGAGACCGAATCAATCGGCCGGAGGCCGAATTGACTGCAGAATGGAGATCTAAGAAGACCATTTGCGATTCCACTCAAGAAGGCGAAGTTCTTCCATGTTCTTGGTGGTTTGGAGCAGCCGTTTCATCCCCATTTCCTGAAAAGGATTAGTATTTCTTGTGTATTTCGTATTATGGATGTGCTTATTGAGATTGTAACGTGTTTTATGTTTTCAATCATGAACTAATTGCTTTGTAGGCATGGGTTAAGAATTATGTGATTGTTATATTTATAAAATCTGGAAATTCTATTTGATTATGTCATCTTGAATTATTGTTGTTCTTTAATTTCATTATGTGCCCGCCTAGCTAGCCGGTATGTATAGCTTCTCCTAGTTTCAGGGATGATTTAGGAGTTGTGTGGCAATAATTCACGCTAGATCATTGTGTATTGGTGAACGCCAGCGACTGAGTTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGAGCTTCATTGGAGTTGAAATATATTAAAAAAAATCCGAAGTTCCGGGAGGATCTCGCTGATAATACTGCATGAGACTGACGGATCAAAAGAATTGCTGGAGCATCTTTATAAAAAATTACAGAAGTCTTAACCTGTGTCTGTTTCCATTCTGTTTTCTCTAGTCGTAATCATTTACTGCTTTCATATTTCTTTTGTTTCAGCATTTTAAAAACCCAATCAATCTAACCAACCTTTTGAAATCACTAAAAAGGCAAATTAAATCAATAGAGGTAGGCATTTCAAGACCCTGTAGATACGATAAATACTTATCACTTGCTGCTAGATTGTGTATACTTGCACAGTATTCTGGAGTTAATTTATCCCATATTTTTAACCACTTCAGAATTGCAACAAGTTTTTGGCGCCATTGCCAGGGACTTGAAATTGTTTTATTTGATTGATTTTTTTGTGTATTTTTTTTTTGGTGATTTGGTGCGTGAACTTTTTGATTGTTTCTTTTTGTTTTGTAGGTGTGACTTTGGTGTATGAGCGATCCCCTTGCGATTAGATTTTCAAGAAGTTCAAGTGAAACTCGAAGAGGAATCGTGCGATGCAGCAAAATAATCAGGCTAAGAATCCTATCCTTGTAGCAAATGATAGGGACAAAGCCATTAGAGCGTATGTTTTCCCAATAGTTGACGAGTTAAATCCAGTGATAGTGTGTCCAGTTATTGAGGCAACAAACTTTGAAATGAAACCGATCATGTTTCACATGTTAGAGATGGTTGGCCAATTCCATGGTTTATCATCTGAGGACCCCCATTTACTGATGACCGCAAAGTGCACGGGCCGCAAGTAATATAAAACGGAAAGTATTCCGAGTATCGAATCCTCGGGGATTGGATTTATTCAATTAATTACCACGAATAATCTTGCTTAACTTTATTTAGAGAACAAAATCTAATGGCAAAAAGATAAAGTAGACATAAAGCTAATCTAAAAAGAAAAAGATAAATGGAGACACAATTTGGTGGGATAATTCTAGAGTGGTTGATTTCGACAATTGGATCTTTAATGCATAATCAATTAACTAACTTGGATTAATCAATCATTTGATTCATAAGTCTAGAAGCCTAATGACAAGGACTCTCCTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTCCTTTCGGTCTCATCTTTATTTACTTAGCATGGCATTACGACCCTTCAATACAACCTCTAACATTATTTATTCTATCCCGTGTCACCCGGGTAAATAGCGTTAGTCATGCATTCAGTTCTAGTCTAAGCTTCTCTCTGTCGAGTTTCCACTTAGTAACGATTCATTTAATCAGTGATCAGTTGATTAAAAGCATTACGGACAAAATGCACAAATGAACAATAATGACAATTAAACCAAATAAATTCATTAATCAAGCAAAGGTTCAACATCTAAATCAATCTCATAGAATTTAGGAATTTACTACTCATAATCACTAAAATTCAATAATTCCTAATCACAACAATTCTAGAAACTAAAACTTAAAGGAAAAGGGAAGAGAAATGCTCATAAAAGTGTCGATCTCCTCGATCCCGCGCCGACCTCCATCGATCTCGAGCTCCAAAAATCTTCAACAAAGCTCCAAAACTCTCCCAAAAATCCCCAATTTTAGTGTGGATTCTAGAATGGGGTGAAAACCCACAAATTGGCACCCCAAACTTGGATGCAAATGGCCCCTTTTATAGGCTCCCAGCAGGCGTAGCGTCGAGACGCTACGTCACAGCGTAGCGACGCTCTGACGTCATCTTTTCTTGGGCTCCAAGTCGTCGCAGCGTCGCGACGCTACATGGACAGCGTTGCGACGCTATCGCGATTCTAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG

mRNA sequence

ATGGATGCGGCCTACTTTGCGAATGAGGCAAACAACGTGATCCTGGATCGTTCATCTAGAGACATGCAAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGACAGCAAAATAATCAGGCTAAGAATCCTATCCTTGTAGCAAATGATAGGGACAAAGCCATTAGAGCGTATGTTTTCCCAATAGTTGACGAGTTAAATCCAGTGATAGTGTGTCCAGTTATTGAGGCAACAAACTTTGAAATGAAACCGATCATGTTTCACATGTTAGAGATGGTTGGCCAATTCCATGGTTTATCATCTGAGGACCCCCATTTACTGATGACCGCAAAGTGCACGGGCCGCAATCGTCGCAGCGTCGCGACGCTACATGGACAGCGTTGCGACGCTATCGCGATTCTAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG

Coding sequence (CDS)

ATGGATGCGGCCTACTTTGCGAATGAGGCAAACAACGTGATCCTGGATCGTTCATCTAGAGACATGCAAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGACAGCAAAATAATCAGGCTAAGAATCCTATCCTTGTAGCAAATGATAGGGACAAAGCCATTAGAGCGTATGTTTTCCCAATAGTTGACGAGTTAAATCCAGTGATAGTGTGTCCAGTTATTGAGGCAACAAACTTTGAAATGAAACCGATCATGTTTCACATGTTAGAGATGGTTGGCCAATTCCATGGTTTATCATCTGAGGACCCCCATTTACTGATGACCGCAAAGTGCACGGGCCGCAATCGTCGCAGCGTCGCGACGCTACATGGACAGCGTTGCGACGCTATCGCGATTCTAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG

Protein sequence

MDAAYFANEANNVILDRSSRDMQVGASCVKDVYTRQQNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQFHGLSSEDPHLLMTAKCTGRNRRSVATLHGQRCDAIAILELSTRLPSVGTLQA
Homology
[Close]
BLAST of Spg015756 vs. NCBI nr
Match: XP_022960432.1 (uncharacterized protein LOC111461168 [Cucurbita moschata])

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-15
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 36  QQNNQAKNPILVAN-------------DRDKAIRAYVFPIVDELNPVIVCPVIEATNFEM 95
           Q N + +NP+++AN             DR++AIRAY  P VDELNP I+ P ++AT FE+
Sbjct: 11  QLNQEFENPVMMANQERIIANAIQLADDRERAIRAYAHPAVDELNPCIIRPEMQATTFEL 70

Query: 96  KPIMFHMLEMVGQFHGLSSEDPHL 107
           KP+MF ML+ +GQFHGL SEDPHL
Sbjct: 71  KPVMFQMLQTIGQFHGLPSEDPHL 94

[Close]
BLAST of Spg015756 vs. NCBI nr
Match: XP_022947838.1 (uncharacterized protein LOC111451598 [Cucurbita moschata])

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-15
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     N I VA+DR++AIRAY  P V+ELNP I+ P ++AT FE+KP+MF ML+ +GQF
Sbjct: 4   QERITANAIHVADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 63

Query: 97  HGLSSEDPHL 107
           HGLSS+DPHL
Sbjct: 64  HGLSSKDPHL 73

[Close]
BLAST of Spg015756 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-14
Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     NPI +A+DR++AIRAY  P V+ELNP I+ P I+ T FE+KP+MF ML+ +GQF
Sbjct: 56  QERITANPIHLADDRERAIRAYAHPAVEELNPCIIRPEIQGTTFELKPVMFQMLQTIGQF 115

Query: 97  HGLSSEDPHL 107
           HGL  EDPHL
Sbjct: 116 HGLPLEDPHL 125

[Close]
BLAST of Spg015756 vs. NCBI nr
Match: XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-14
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     N I +A+DR++AIRAY  P V+ELNP I+ P ++AT FE+KP+MF ML+ +GQF
Sbjct: 34  QERITANAIHLADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 93

Query: 97  HGLSSEDPHL 107
           HGL SEDPHL
Sbjct: 94  HGLPSEDPHL 103

[Close]
BLAST of Spg015756 vs. NCBI nr
Match: KAG8491357.1 (hypothetical protein CXB51_014478 [Gossypium anomalum])

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-14
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 39  NQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQFHG 98
           N  +NPIL+A+DRD+A+R Y  P+ D+LNP I  P IEA  FE+KP+MF ML+ VGQF  
Sbjct: 47  NLVQNPILIADDRDRALRQYAIPVFDDLNPGIRRPEIEAQQFELKPVMFQMLQTVGQFSR 106

Query: 99  LSSEDPHL 107
           +++EDPHL
Sbjct: 107 MTTEDPHL 114

[Close]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 36  QQNNQAKNPILVAN-------------DRDKAIRAYVFPIVDELNPVIVCPVIEATNFEM 95
           Q N + +NP+++AN             DR++AIRAY  P VDELNP I+ P ++AT FE+
Sbjct: 11  QLNQEFENPVMMANQERIIANAIQLADDRERAIRAYAHPAVDELNPCIIRPEMQATTFEL 70

Query: 96  KPIMFHMLEMVGQFHGLSSEDPHL 107
           KP+MF ML+ +GQFHGL SEDPHL
Sbjct: 71  KPVMFQMLQTIGQFHGLPSEDPHL 94

[Close]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     N I VA+DR++AIRAY  P V+ELNP I+ P ++AT FE+KP+MF ML+ +GQF
Sbjct: 4   QERITANAIHVADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 63

Query: 97  HGLSSEDPHL 107
           HGLSS+DPHL
Sbjct: 64  HGLSSKDPHL 73

[Close]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.8e-15
Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     NPI +A+DR++AIRAY  P V+ELNP I+ P I+ T FE+KP+MF ML+ +GQF
Sbjct: 56  QERITANPIHLADDRERAIRAYAHPAVEELNPCIIRPEIQGTTFELKPVMFQMLQTIGQF 115

Query: 97  HGLSSEDPHL 107
           HGL  EDPHL
Sbjct: 116 HGLPLEDPHL 125

[Close]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.3e-15
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 37  QNNQAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQF 96
           Q     N I +A+DR++AIRAY  P V+ELNP I+ P ++AT FE+KP+MF ML+ +GQF
Sbjct: 34  QERITANAIHLADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 93

Query: 97  HGLSSEDPHL 107
           HGL SEDPHL
Sbjct: 94  HGLPSEDPHL 103

[Close]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.5e-13
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0 

Query: 40  QAKNPILVANDRDKAIRAYVFPIVDELNPVIVCPVIEATNFEMKPIMFHMLEMVGQFHGL 99
           Q  NPI++A+DR +AIR Y  P+ +ELNP IV P I+A  FE+KP+MF ML+ VGQF G+
Sbjct: 8   QIVNPIILADDRARAIREYAAPMFNELNPGIVRPEIQAPQFELKPVMFQMLQTVGQFSGM 67

Query: 100 SSEDPHL 107
            +EDPHL
Sbjct: 68  PTEDPHL 74

The following BLAST results are available for this feature:
BLAST of Spg015756 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960432.12.6e-1552.38uncharacterized protein LOC111461168 [Cucurbita moschata][more]
XP_022947838.14.5e-1560.00uncharacterized protein LOC111451598 [Cucurbita moschata][more]
XP_022929949.11.0e-1458.57uncharacterized protein LOC111436411 [Cucurbita moschata][more]
XP_022926214.11.3e-1458.57uncharacterized protein LOC111433394 [Cucurbita moschata][more]
KAG8491357.18.5e-1457.35hypothetical protein CXB51_014478 [Gossypium anomalum][more]
BLAST of Spg015756 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015756 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H7E41.3e-1552.38uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1G7Q62.2e-1560.00uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515... [more]
A0A6J1EQ904.8e-1558.57uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
A0A6J1EEI26.3e-1558.57uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
U5CUI24.5e-1358.21Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... [more]
BLAST of Spg015756 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015756.1Spg015756.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
molecular_function GO:0043531 ADP binding