Spg015691 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAATCCAAATTTGTTTTGTGCGTTTGTGTGGGTGATTTTTGTGTCGAAGCAAAGTAGAGCGGTGGAATGTAATACAGATTTATGCAAGTCGATTGCAGCAACGGAAAAAGATCTTATCGAGTTTGCTTTGATGATGGAATTCCTTAAAGCTGAGTTCTTCTTGAATGGAGCTCTTGTAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATGGAAGAATTTGCGTATGAAGAATTTGGACACATAAGGTCTCTCTCGCTCTCGAATTTAGGATAGAAAACTAAGAGAATCAAATTATTTGATCGAATCATACTATTGTTTGATAAACGTCTCTCTTAATTAAGATATATGTCTTACCAGTTGACCTATACACGATCAATAATCTAACGATCCTATGATGATTTGTTGTTGTTTTTGTGTGTGTGTTTTCAGATCCATTAAGAACACAATTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAGAGCATTTGCGGATTTGGTAGATAAAGCAGTTGGCTACAAACTCAGTCCTCCATTCGACGCTTATGCCAATTCTCCTTGCCGTAAAGATCATCGCTTACGTCAGACTTAAAGGCTACGTCGGAACAATCCCACAACTCGTCCTTCCCAAATCTCACAGCGTAAGAAAGAAAAAAAAACAAAACCATAATTCCTTCCATTCTTGTAATCATCATCGTCAATTCATGTCGCTAAATGTCACCTAAGTTCGTACTATAAAATTGTTGTCAGTTGGTGGCGAAGCTGCTCGACGTGGAGGTCGGAAAAGACCGAGCAAATTTGTACTTGAAACTTGATGACATGGCGGTTCCTTACAATATAACTGTTGCTCGCTTCATCAACCTGATCACCTCGAAACTGTTCAATCAGCTCGACAACTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGGCGGAGAAGAATCGAACAGAGAGCAACATTCTCGTTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAATCGGCGACGAGCATATACCAACTGGTGAGATCGTCCTCCAAGGTTTTGGTCTAAAAATTGTTGGACAATTCGTACTTAGATCACTAAGTCTGCAATGTCCTGCGTTTCGAAATTATGCCATTTTGAATTAATCGAGTTTGAATTCTGATTTGGGAAAAAAATATATTAGAATTTAATTATAGCCTTCAGTTGATATTTTAAAGCCAATTGAGATATTTTCCTTTTCTTCCGTAGTGGTTAAGCAGTTGGAGTTAGTCTGTTTTGGGAGGTTACGTGGGAGCGATTGTGCATGTTGGGAATTTGAATCCCACTAGAAGAAACGACAATAGACAATTACAGAGAAATGTAGGTCTTGGACAGAAGGGAAAGAGAAGGATAAAGAAGAAGAGACATAGAAAGTTATAGTGGTTCCACCCAAAGGGGTGTACATCCACTCTTCAAACACCAGGCAATATCAATTCTATTCTCAATCAAAAGCAATCAACTCGATACAAGCCTTTCAAGAAAACAGGGGAACTCTGTTTTCAGATACTACTCAATACTGTAGGTCTCGGGTAA ATGAGAAATCCAAATTTGTTTTGTGCGTTTGTGTGGGTGATTTTTGTGTCGAAGCAAAGTAGAGCGGTGGAATGTAATACAGATTTATGCAAGTCGATTGCAGCAACGGAAAAAGATCTTATCGAGTTTGCTTTGATGATGGAATTCCTTAAAGCTGAGTTCTTCTTGAATGGAGCTCTTGTAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATGGAAGAATTTGCGTATGAAGAATTTGGACACATAAGATCCATTAAGAACACAATTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAGAGCATTTGCGGATTTGTTGGTGGCGAAGCTGCTCGACGTGGAGGTCGGAAAAGACCGAGCAAATTTGTACTTGAAACTTGATGACATGGCGGTTCCTTACAATATAACTGTTGCTCGCTTCATCAACCTGATCACCTCGAAACTGTTCAATCAGCTCGACAACTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGGCGGAGAAGAATCGAACAGAGAGCAACATTCTCGTTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAATCGGCGACGAGCATATACCAACTGGTGAGATCGTCCTCCAAGGTCTCGGGTAA ATGAGAAATCCAAATTTGTTTTGTGCGTTTGTGTGGGTGATTTTTGTGTCGAAGCAAAGTAGAGCGGTGGAATGTAATACAGATTTATGCAAGTCGATTGCAGCAACGGAAAAAGATCTTATCGAGTTTGCTTTGATGATGGAATTCCTTAAAGCTGAGTTCTTCTTGAATGGAGCTCTTGTAAAAGGGCTCGACGCCATTGATTCAGCTCTGGCATCCGGAGGCCCACCTCCTATTGGTGCTCAAATCGCCAACTTAGATCCTCACACCCGTCCAATCATGGAAGAATTTGCGTATGAAGAATTTGGACACATAAGATCCATTAAGAACACAATTGGTGGAGGTTTTCCAAGGCCATTGTTGGATCTAAGCAAGAGAGCATTTGCGGATTTGTTGGTGGCGAAGCTGCTCGACGTGGAGGTCGGAAAAGACCGAGCAAATTTGTACTTGAAACTTGATGACATGGCGGTTCCTTACAATATAACTGTTGCTCGCTTCATCAACCTGATCACCTCGAAACTGTTCAATCAGCTCGACAACTGCAGCATCAAGGATGAAGAATTAATAGTGCCTCAGTCGCTTGGGGCGGAGAAGAATCGAACAGAGAGCAACATTCTCGTTGCCCGAACGCCGCAAGAGATCATGCGGATAATGTATGGAATCGGCGACGAGCATATACCAACTGGTGAGATCGTCCTCCAAGGTCTCGGGTAA MRNPNLFCAFVWVIFVSKQSRAVECNTDLCKSIAATEKDLIEFALMMEFLKAEFFLNGALVKGLDAIDSALASGGPPPIGAQIANLDPHTRPIMEEFAYEEFGHIRSIKNTIGGGFPRPLLDLSKRAFADLLVAKLLDVEVGKDRANLYLKLDDMAVPYNITVARFINLITSKLFNQLDNCSIKDEELIVPQSLGAEKNRTESNILVARTPQEIMRIMYGIGDEHIPTGEIVLQGLG Homology
BLAST of Spg015691 vs. NCBI nr
Match: XP_024466430.1 (desiccation-related protein PCC13-62 [Populus trichocarpa] >PNT58927.1 hypothetical protein POPTR_001G380000 [Populus trichocarpa] >PNT58928.1 hypothetical protein POPTR_001G380000 [Populus trichocarpa]) HSP 1 Score: 199.1 bits (505), Expect = 4.2e-47 Identity = 126/270 (46.67%), Postives = 153/270 (56.67%), Query Frame = 0
BLAST of Spg015691 vs. NCBI nr
Match: XP_030948269.1 (desiccation-related protein PCC13-62-like [Quercus lobata]) HSP 1 Score: 196.4 bits (498), Expect = 2.7e-46 Identity = 127/291 (43.64%), Postives = 162/291 (55.67%), Query Frame = 0
BLAST of Spg015691 vs. NCBI nr
Match: KAF9666637.1 (hypothetical protein SADUNF_Sadunf16G0249600 [Salix dunnii]) HSP 1 Score: 194.5 bits (493), Expect = 1.0e-45 Identity = 126/270 (46.67%), Postives = 151/270 (55.93%), Query Frame = 0
BLAST of Spg015691 vs. NCBI nr
Match: XP_031282667.1 (desiccation-related protein PCC13-62-like [Pistacia vera]) HSP 1 Score: 194.5 bits (493), Expect = 1.0e-45 Identity = 134/291 (46.05%), Postives = 161/291 (55.33%), Query Frame = 0
BLAST of Spg015691 vs. NCBI nr
Match: KAG5254810.1 (desiccation-related protein [Salix suchowensis]) HSP 1 Score: 193.7 bits (491), Expect = 1.8e-45 Identity = 130/294 (44.22%), Postives = 157/294 (53.40%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy Swiss-Prot
Match: P22242 (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.3e-29 Identity = 92/245 (37.55%), Postives = 122/245 (49.80%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy TrEMBL
Match: A0A7N2N440 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 4.8e-49 Identity = 121/240 (50.42%), Postives = 162/240 (67.50%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy TrEMBL
Match: B9GGY2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G380000 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47 Identity = 126/270 (46.67%), Postives = 153/270 (56.67%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy TrEMBL
Match: A0A7N2N3E4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 127/291 (43.64%), Postives = 162/291 (55.67%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy TrEMBL
Match: A0A4U5PY80 (Desiccation-related protein PCC13-62 OS=Populus alba OX=43335 GN=D5086_0000167840 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45 Identity = 126/270 (46.67%), Postives = 150/270 (55.56%), Query Frame = 0
BLAST of Spg015691 vs. ExPASy TrEMBL
Match: A0A5N5JVJ2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_025634 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45 Identity = 124/270 (45.93%), Postives = 149/270 (55.19%), Query Frame = 0
BLAST of Spg015691 vs. TAIR 10
Match: AT3G62730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40 Identity = 114/283 (40.28%), Postives = 149/283 (52.65%), Query Frame = 0
BLAST of Spg015691 vs. TAIR 10
Match: AT1G47980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38 Identity = 107/281 (38.08%), Postives = 142/281 (50.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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