Spg015690 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015690
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold10: 19560906 .. 19568812 (-)
RNA-Seq ExpressionSpg015690
SyntenySpg015690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGTAGTGCTGGGCGGGCCCCACTACATCGTAGGATTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTATTTCATATGCCTTGCTAGATTTTTAATGACGAACTTGCAAGATATTTTAGAAAGCCTTTTCCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTAGCACGTGTTTTGACTTACGGATTTAGAGTTTTAAAGTCAGTCACTCACTGGGCTTCATAGCTCATTCTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTTCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTTGTCCGGGAGGGGGTGTGACAATACAAATCAAAGGACAATCCCTCATGAGCAGGAGTCCATAATCAACTCAGGATTAAGACCAAGTTGTTTAGGTCGTCCTAGTGAAATAGAAAACCAACTAGTTAACGGTGTTATAACCAGTGGTTACTATTTCGTGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCATAGCGTTTGTATCAAATACAAAGTTGGTCATATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTATACTATAGACCCTTTAGGTTGTTTCTTGAATAGTGATCCCCATATGTCGCTACATATAGTTCAAGATTCATATTACAGCCTAGGATGTCTAGTTTATTGGATTAGGGTTATTTTAGGCAAAGACAAATATAAAATAACTAATAACATTTAATGGAAAATATATCAATATTATTACATTAATATCCGGTCAACGGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACAGTTCCCTTAAGTGCTGACTCCAGAACGTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGTTTTAGGTTTAGTGGTCGGACCACAAACCAATTGTTCATTAGGGACTCAGTGGAGAATTAAGGAAAAAGATGTAACTTCAGGGGTAAAACGGATATTTGACCCAGTTGTCGTTACGAAAAACCTGTGAAGGGTCAACTTACTAATCATGGTTATATCAGGTGGACGGAAATATATCTTCAGTGAGGGGAGTTCAATTATCGAGCTATAGTGGAGTGTCCTGGTAGTTAACGAATGTTGGTTAACTGAGTTAAAAGAGTTTAACCAGTTAGTCTCGGATCGTTGGAGCCCATGATCTGTAGGTCCATTAGGTCCCCTTGCTAGCTCAAACGGAATTAACCTTAGAACTATGATGAAAGAATTTGAAACGTTTAAGTGGTGCGTCGTCGGCTGAATGGATGGATGTGAGATAAGATGGAGGATAATAATAAAGGTAAATTCAGCCAACCCTAGTGCAAGTATACACTGTCACACGTAGTAATAAAAACCCTTAGCTTAGAGCATTCCAAGGGTATCGATCCCACGAGGACTAAATTGGAAATTTAGATTTGATGAAGAAACTTCTCAACTTGATTGCTTAAAAAAAAATAGGTAACCAAAGAAATAAGATTGATGATTGGTTTTACAAAAGATAAATAAAACAAGCAAATAAACAAAAGAATAACAATAAAAGATAAACGAGGTATTCAACATGGATTCATCCCAAAGGCAATAACTTTAATCATGGATTATTTAATCTTAAGCCTATTCAATGCATTGGGTCAGATTTAACTTCTATTTGGCCTTGCTCCCAAGAACCGTTAGAAGGCTAAGCGAGTACCGTTATGCATATTTCTGTGACTCGACTCTGACATAGATAATTCACGAATACAATCTATAACCCTATAGTCGATATAGGGTGCCTTAGGCAGTTTGTCCTATACCGCCGAACAATCTATTTCGAGCTTTTTCTCCTATATCACCTTTATGAGAACCGATATCGTCAGTCCCTTTCGAGATCAAACTCACATAGCATGCAAAGTCTAAGTGATCAAGTTAAACTTAGCAAGATCAGAATGATATTCAATAAAGAATGACATGCATTGAACAAAACTTAAGCAAATAAAACACTTTCCAGCTATTGAACCATAAGGGAATTCACCATATTGAACTCCTCAACGGAATTTAGCTACTCATGGTGAGATAAAGTGCAAATGAATACATTTTCATTGAAAATAAGATGTAAAGAATACAAATAAATGAAAAGTATCAAAAGCTGGAAATAATGGAAGTAGCCAAATACTATGGGTTTTTCTATTTATCCAATCCTTCTAAAGTTCACATAGACACTCCACTCTCTCGCTTTTACAAAGTGGAAATGGGTGAAAATCCCTACAAACCCTAAGGTTTGATGTCTAACTAAGGTTAGAATTTAGTCATCTAAGAAGGACCTCGGGCATCCCTACTCATAGGCGTCAACTAGGGTTTTGTCACCACCCTCTTCTTCCAAATGAGTTCTGCTTGAATTTGACTTCGAATCACGAGCTTATATAGTGTTGGAAATGGTTGAGGAGCTATGAAATAGGTGCTGGTAGGTAGCCCAGTCGGTTTCGGGGTCAAAACAGCCGATTAGGTGCGAAGAAGTCTCGTTCAAAACGACCCGCGGACGACTCGGAACTGCCTCTGTTTTTTTCAGAAATGCGGTCGCATTTCATTTTGCCTTCCCAGAAATGCAGTCGCATTTCTGGGTAAATTGCAGCTTTTCCTCTGTTTTTCTGCACAACAACAAACTTTGTCAAATTCCCTTAAAATTGAGTCTTTTTAAGTACAAATGAGCATAATTTGACAAAAGTGATTCTCAACACCCTAACTTAACAATTTTAACATATTTTGAGCTCGGGAACAGTAAAATTGATCTAAACATGCAACATTTAACAAGATAATGAGCTAAATATAAGGGTAAAATAGGTATAATTTTTACCCTTATCATCAAGTTCATTAAAGGGAGTTGTCGTTAAATTATATTTGATATATTTAACGTAATTATGGATTAAACTGTATTTTGAGAGAGTTGGAGATATTTTAATATTACAAATATGTATAGGATACATATTCGAGAATTCGATCATATGATGGATCGGGATAGGTGTAATATTAAAATTGAATATAATTAATTTTAATTTATTTATTTATTTGATTAATTTCATTTAAATTAATAAAGATTAATTATGAAATTAATTTATAAATGAATTTGTGAAATTCATTTTAATTTAAGAGGTAAATTTTCTTCTTATGACACCTTATCATACACCTATTCAATTCTCTTTATTGCTGGCTATCATCCATGAGTTGGGTGGCATCTTTGTCTTCTTTAAAAGGAGAAGAACCATCTGAATGAAGGGATGGATGGCTTTTGCTGGTGTTTTTCTCCTTCAAAACATATTGCTCTCTCTTGGTTCAAGTTGGAACCTTCAAGCTCTCATTTCAAAATTCATCACCGATTTGAGTCCCACAACTCGTTCTAAGGCCGGAGGATAGCGGGGAACACTCTCGTGGTTGTCTACGACTCGTTCGTGATCCAAAACTACTGAAGGAACAACTTGAATTCGGTCCAAAAGGTTGGTATTTTTCACGCTCTATTTTTGTTCGGTGTTTGCCATGTTTTTCATATGAGAAATTAAAGAAATTAAAGTGCAATCTATCCAAATCACTTCCGCTAGAGTGTTCTACACTCCTTCAAATACATCTGGTCAAGCCCATCCTTCTCAAGAGTTGAGAATGCCTCGACGGAGTGGGAGGGTTATTATTCAACCTGAACGCTACCTGGGTTTAGCATAAACTCCAGCTGTCATACCTGATGATGGTGTTGAGGATCCATTGACCTTTAGACAGGCAATGAATGATGTGGATAAAGACCAGTGGGTCAAAGCTATGGACCTAGAGATGGAGTCTATGTACTTCAATCAAGTCTGGGATCTTGTAGACCAACCTGAAGGGGTAAAACCCATAGGGTCTAAATGGATCTACAAGAGGAAGCGAGACGCAACTGGGAAAGTACAGACTTTCAAAGCTCGACTTGTGGCAAAGGGTTATACCCAAAAGGAAGGGGTGGACTATGAGGAAACCTTCTCCCCAGTTGCCATGTTAAAGTCGATAAGGATTCTCTTGTCCATTGTCACGTTTTATGATTATGAAATTTGGCAAATGAATGTCAAGACTGCTTTTCTGAATGGCAATCTTGATGAGAATATCTTTATGTCTCAACCAGAGGGGTTCATTGCTTAAGGTCAGAGCAAAAAGTTTGCAAGCTTAAACGATCCATTTATGGGTTGAAGCAAGCTTCTAGATCTTGGAATATAAGGTTCGATACTGCTATCAAATCTTATGGTTTTGACCAGAACGTTGATGAGCCTTGCGTTTACAAAAGGATTATCAGCAGTTCAGTAGCTTTTCTAGTGTTGTATGTATATGATATTCTGCTCATTGGGAATGATGTAGAATATTTAGCTGACATTAAAACTTGGCTATCAACTAAGTTCCAAATGAAAGATTTGCGTGAAGTTCAGTATGTTCTAAGGATTCAAATAATAAGGAATCGTAAGAACAAAACGTTAGTCCTGTCTCAATCATCATATATAGACAAGATGCTGTCTAGATATAAGATGCAGAATTCCAAGAGGGGTTTATTACCCTTCAAGCATGGAGTTCATTTGTCTAAGGAACAATGTCCTAAGACACCTCAAGAAATTGAGGATATGAGACGGATCCCTTATGCTTCAGTTGTGGGCAGTCTTATGTATGCCATGTTGTGTACTAGGCCTAACATATGCTATGCAGTTGGGATAGTCAGCAGATACCAGTCTAATCCAGGGTTAGGCCACTGAACTGCAGTGAAAAACATCCACAAGTATCTTAGGAGAACGAGGGACTATCAACTTGTGTATGGCGCTAAGGATTTGATCCTTATAGGATACACAGATTCTGACTTTCAGACTGATAAGGATTCTAGGAAATCCACATCAGGGTCAGTGTTTACCCTCAACGGGGGAGCTGTAGTCTGGTGTAGCATCAAAAAAGGATGCATTGCAGACTTCACCATGGAGGCCGAATATGTCGCTGCTTGTGAAGCAGCTAAGAAGGCTGTATGCCCTAAAACTTGTAGATAGTAAATAAAACAAATTAATCGATCTCAATAAGTCGTTATTGGAGCGATTCAGTAATTTGGTTATTGAACAATCGAGTTTGCATTAATAAACCCTAGATTTAATAAACTAAGATCCAAGGTTGTTTAAATAAAACTTGGACTAGTATGTGGGGACATACGGGGATCGGTGTTCAAGTAACAACCTAAATGGTCTATAGTATAGGGATAAGGTTGGATACCTTATCCTGGTGACACTATGTGATACGGCCCACTGTGTATTCGATACAAATACATTAATCCAAGGCATCCATGTAAGGGACATGAAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAAACCACTAGATGTAACACCATTGACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACCCTTTTTCAAGAGGGATTGTCCTTAGATTTGTATGGGTGAGAGTGGCCTGTTCGCTGACTCAATATTCCTACCATTTTAGGGGCAAGACCGAGTGGGGGCTGGGAACATAACAGTACAAGATGAAATTCACTCCTTCCCCTATTAGAGTAAGTAGATGTGTGTTCCCTTAAGGGCAGATTCCGGGGCTTGAACAAAGGCGCGCCGTCCTCTCCTGGCCCGAGAGGAACTCCTATTTAGTGGTTGGACCCTAAACAACTTGTTCATTAGAGGGACCAGTGGTACTTAAGGATCCAGAGGTAACCGAGGGGTAAAACGGTAATTTGACCCAGCTGGCGTTACGAACACTCGTGAAGGATTGACTTACTGTATTGGTCAATATCCGTGGACACAGAAATATTCTAGAGAAGAGTTCAACTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGATTAGCTTGGTTCATGAGTTTAGCCAGTTAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTGCACCTGCTAGCTTGTAACAGGTACTGAGATTAATTAGTCTTGAATATTAAAGGGAATTTTAGTTAATTGTATTTGATATAATTAATATAATGTATGGAGATACTTTATAATATAAGTTTAGAGAATTAAACTTTATAATAAAATTAATTTTGGATATGATTCAAAATTCATTATTGAGAGATTTAAATATTTGAAAGAGTTCAAATATTAAATATGGATTAGATTCATATTGAACTATAGGTTAAAATTAATATGAATAGGGATTCATATTTAAACTATAGTATCAGAGAGAAAATGAAATTAATTAGATATGTGATATTTAATTAATTTATGAACTAATTAATTGGACAATTAATTAATTTAATTTAATTTGGTTGAATATGATTTAATCGAAATTAAAACTATAGTTTATAATTAATGTACATTAGATGCACATTAAAACTATAGGTTAAAAGTGAGAGATATTCATTTAAATGCATTTTAAATGAATGTATTAATTAAATATGATTAATTAATTAAAATTTATTAATATGATTAATTAATTAAAATTAATTTAATTTTAATTAAATTAATTTAGTAACTCCCTGGGAGTTACTACGTGAAAAAAATCTGGGAAGTTATCTCAGATAACTCCTCCACTCTCTCACGATTTTTTCTCTAAAAGTGTGGTGTGTGCAAGGTTTTTGGGTTACAGAACGGTACAGAACAAAAATAGCGCTCTCGCCCTTTTTTCTCTCTAACACTCTCAATATTTTCTTCAAGAAAACACACAACAACTTCTTGTAATTTTTCCCTTCAAGGCTTTAGGTTCCCACCAACCTAGTCTCAACAATTCAGAGCCGTAGCGGGTGTTCCCTTTTTGGTGGTGTTCCTTGGAGAAGATACTATACGTGATTTATTTGGAGCATAGTGCTGTTTTGGCTTCAATATGTAAGTCTCCTCAAATCTAATTCGTTTAGATTATTTTTCCTGTATGCTTAATCTAGTACATAGAAATAGTTTCTGTTTTGCCAATGTATTGGTTTTTCTTAATTGAAATTCAATTTGAGTATGATCTTGATTGTTTCCGCTGCCAAAGGAATTATAATCCTTCACTTGATGTTTGGGTTTTTCCATGAGCACTTTGGAGCAAAAAGGACTTAAAAGGAACAAATTAGGTCAAATCCTGAGCATTGGAAGCAAGTGGGAAGCAAAAGAGCAAGCTAGACTCGAGAAGGTAGCGTTGAGACGTTATCCTCAAGCATCTCAATGTTATGGATTCAGTAAGAAGAAGAAATCACTGCCTGGTGTCGAGACGCTGACCTTAGCGTCTCAACGCTAG

mRNA sequence

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTTGTCCGGGAGGGGGTGCGAAGAAGTCTCGTTCAAAACGACCCGCGGACGACTCGGAACTGCCTCTGTTTTTTTCAGAAATGCGGTCGCATTTCATTTTGCCTTCCCAGAAATGCAGTCGCATTTCTGGCACTTTGGAGCAAAAAGGACTTAAAAGGAACAAATTAGGTCAAATCCTGAGCATTGGAAGCAAGTGGGAAGCAAAAGAGCAAGCTAGACTCGAGAAGGTAGCGTTGAGACGTTATCCTCAAGCATCTCAATGTTATGGATTCAGTAAGAAGAAGAAATCACTGCCTGGTGTCGAGACGCTGACCTTAGCGTCTCAACGCTAG

Coding sequence (CDS)

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTTGTCCGGGAGGGGGTGCGAAGAAGTCTCGTTCAAAACGACCCGCGGACGACTCGGAACTGCCTCTGTTTTTTTCAGAAATGCGGTCGCATTTCATTTTGCCTTCCCAGAAATGCAGTCGCATTTCTGGCACTTTGGAGCAAAAAGGACTTAAAAGGAACAAATTAGGTCAAATCCTGAGCATTGGAAGCAAGTGGGAAGCAAAAGAGCAAGCTAGACTCGAGAAGGTAGCGTTGAGACGTTATCCTCAAGCATCTCAATGTTATGGATTCAGTAAGAAGAAGAAATCACTGCCTGGTGTCGAGACGCTGACCTTAGCGTCTCAACGCTAG

Protein sequence

MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSTWFSVSVGSTGIVRGDDVCWLHAVFRAKLAGCPGGGAKKSRSKRPADDSELPLFFSEMRSHFILPSQKCSRISGTLEQKGLKRNKLGQILSIGSKWEAKEQARLEKVALRRYPQASQCYGFSKKKKSLPGVETLTLASQR
Homology
[Close]
BLAST of Spg015690 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-21
Identity = 67/115 (58.26%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTWFS 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SSTW  
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  VSV--------GSTGIVRGDDVCWLHAVFRAKLAGCPGGGA---KKSRSKRPADD 88
           + V           GIVR DDVCWLHAVFRAK AG PGGG      S+ +RP  D
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMPPPTSKRRRPNQD 115

[Close]
BLAST of Spg015690 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-21
Identity = 67/115 (58.26%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTWFS 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SSTW  
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  VSV--------GSTGIVRGDDVCWLHAVFRAKLAGCPGGGA---KKSRSKRPADD 88
           + V           GIVR DDVCWLHAVFRAK AG PGGG      S+ +RP  D
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMPPPTSKRRRPNQD 115

[Close]
BLAST of Spg015690 vs. NCBI nr
Match: KAA0062407.1 (uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa] >TYK26574.1 uncharacterized protein E5676_scaffold313G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-20
Identity = 61/100 (61.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSTW------------------- 60
           MTEILS RLYGTVCTQV+IELP+PDTLPTSAESS S+ +TW                   
Sbjct: 1   MTEILSLRLYGTVCTQVKIELPMPDTLPTSAESSESNFNTWLELYFESVHVEIFCYFTNQ 60

Query: 61  --------FSVSVGSTGIVRGDDVCWLHAVFRAKLAGCPG 74
                   F+VSVGSTGIVRGDDVCWLHAVFR K A  PG
Sbjct: 61  VMSGLHLVFNVSVGSTGIVRGDDVCWLHAVFRDKTAVDPG 100

[Close]
BLAST of Spg015690 vs. NCBI nr
Match: TYK01041.1 (uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-19
Identity = 63/111 (56.76%), Postives = 69/111 (62.16%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTW-- 60
           MTEILS RL+GTVCTQ                 VEIELPVPDTLPTS ESS S+SS +  
Sbjct: 1   MTEILSLRLHGTVCTQVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSTESSESNSSYFTN 60

Query: 61  ---------FSVSVGSTGIVRGDDVCWLHAVFRAKLAGCPGGGAKKSRSKR 84
                    F++SV STGIVRGDDVCWLHAVFRAK  G P GG    R+ R
Sbjct: 61  QVMSGLHLVFNISVESTGIVRGDDVCWLHAVFRAKTTGGPRGGVMPPRTSR 111

[Close]
BLAST of Spg015690 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-16
Identity = 58/101 (57.43%), Postives = 60/101 (59.41%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSTW---------------------------FSVSVGST 76
           VEIELPVPDTLPTSAESS S+SSTW                           FSV VGST
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  GIVRGDDVCWLHAVFRAKLAGCPGGGAKKSRSKR--PADDS 89
           GIVRGDDVCWLHAVFRAK  G PGGG     S    PADD+
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDA 194

[Close]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21
Identity = 67/115 (58.26%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTWFS 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SSTW  
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  VSV--------GSTGIVRGDDVCWLHAVFRAKLAGCPGGGA---KKSRSKRPADD 88
           + V           GIVR DDVCWLHAVFRAK AG PGGG      S+ +RP  D
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMPPPTSKRRRPNQD 115

[Close]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21
Identity = 67/115 (58.26%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTWFS 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SSTW  
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  VSV--------GSTGIVRGDDVCWLHAVFRAKLAGCPGGGA---KKSRSKRPADD 88
           + V           GIVR DDVCWLHAVFRAK AG PGGG      S+ +RP  D
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMPPPTSKRRRPNQD 115

[Close]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match: A0A5A7V638 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001830 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-20
Identity = 61/100 (61.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSTW------------------- 60
           MTEILS RLYGTVCTQV+IELP+PDTLPTSAESS S+ +TW                   
Sbjct: 1   MTEILSLRLYGTVCTQVKIELPMPDTLPTSAESSESNFNTWLELYFESVHVEIFCYFTNQ 60

Query: 61  --------FSVSVGSTGIVRGDDVCWLHAVFRAKLAGCPG 74
                   F+VSVGSTGIVRGDDVCWLHAVFR K A  PG
Sbjct: 61  VMSGLHLVFNVSVGSTGIVRGDDVCWLHAVFRDKTAVDPG 100

[Close]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match: A0A5D3BMJ4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00470 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-19
Identity = 63/111 (56.76%), Postives = 69/111 (62.16%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSTW-- 60
           MTEILS RL+GTVCTQ                 VEIELPVPDTLPTS ESS S+SS +  
Sbjct: 1   MTEILSLRLHGTVCTQVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSTESSESNSSYFTN 60

Query: 61  ---------FSVSVGSTGIVRGDDVCWLHAVFRAKLAGCPGGGAKKSRSKR 84
                    F++SV STGIVRGDDVCWLHAVFRAK  G P GG    R+ R
Sbjct: 61  QVMSGLHLVFNISVESTGIVRGDDVCWLHAVFRAKTTGGPRGGVMPPRTSR 111

[Close]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16
Identity = 58/101 (57.43%), Postives = 60/101 (59.41%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSTW---------------------------FSVSVGST 76
           VEIELPVPDTLPTSAESS S+SSTW                           FSV VGST
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  GIVRGDDVCWLHAVFRAKLAGCPGGGAKKSRSKR--PADDS 89
           GIVRGDDVCWLHAVFRAK  G PGGG     S    PADD+
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDA 194

The following BLAST results are available for this feature:
BLAST of Spg015690 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK27998.18.7e-2158.26reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0066851.18.7e-2158.26reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0062407.14.3e-2061.00uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa] >TYK... [more]
TYK01041.16.2e-1956.76uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa][more]
KAA0062409.12.2e-1657.43reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of Spg015690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DX394.2e-2158.26Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
A0A5A7VMG94.2e-2158.26Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5A7V6382.1e-2061.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BMJ43.0e-1956.76Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7V9N31.1e-1657.43Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
BLAST of Spg015690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015690.1Spg015690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016779 nucleotidyltransferase activity