Spg015648 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015648
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 20-like
Locationscaffold10: 19173872 .. 19184895 (+)
RNA-Seq ExpressionSpg015648
SyntenySpg015648
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCGACTTCCTGCTTTATTTCTCGTCTTGGTCTCGCTTCTTCTCAGTTCGAGGCTTCAATCTTTGGCTTTTGGTGTCACATTTCAGGCCCGCTTCAGCACAATTGGGTCTCTTCACCTCCTCTCCTTCCAAGACATCGAGATGGCTCTAAAAACCCCGTAATTGGCCCGAATTAACACCAATTAGCGTGATCGGCTCCCGACACGGCCTAAGCTCAATTAACCTGTAAATAGGACAAGTAAAGCATAAAATGACTCTAACAAGCTTCGATTAGAGGCGATAAAATAGGACTATTTAGGTCATATCACATGTGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAACTCCTATTTATTCGGGCTTATCCTTAGATCTACATGGGTGAGAGTGGCTCATCATCGTCGACTCAATAAACCCCCCATTTCAGGGAAAGGAACGGGTAGATAGCTAGGCACATAGTCCTGCAAGATGGAATTCACTCCTACCCGTTATAGGGATAGTAGAGAGGTTGTTTCCATAAGTGCTGACTCTGAGACTTGAACAAGGGCCTCACCCTCTCGTTGGCCCGGGAGGGACTCGGTTTGATGGTCGAACCACAAACCAATTGTTCATTAGAGGATCAGTGCGACTTAAGGAACGAGATATAACTTCAGGGGTAAAACGAACATTTGACCCAGTTGTAGTTACGAACAACCTGTTATGTTGTGTACAAGGTCAGACATATGTTATGCAGTAGGGATTGTCAGTAGGTATCAATCCAATCCAAGATTAGATCACTAGACAACCGTTAAAAATATCCCCAAGTATCTTCGGAGAACGAGGTACTATTTGCTCGTGTATGGCGATAAGGATATGATTCTTATAGGATACACTGATTCTGATTTTCAGACTGATCAAGATTCGAGGAAATCCACATTGGGATTGATTTTTACCCTTAATGAGGGAGCTATAAATCTGGCGAAGCATCAAACAGGGAAGCATAACAAACTCGACCATGAAGGTCGAATATGTAGCTGCTTGCGAAGCATCGAAAGAGGTTGTATGGCTTAGGAAGTTTTTGACCGATTTAGAAGTCGTTCCTAATATGCATCTGTCTATCGCTCTCTATTGTGATAATAGTGGAACAGTTGCAAATTCTAAAAAACCTAGGAGCCATAAGAGAGGCAAGCACATCGAGAGGAAATATAATCTCATCAGGGAGATAGTGCACCAAGGAGACATAATTGTCACGAAGATAGCGTCGGAGCACAACATTGGTGATCCATTCACGAAGGCTCTTACGACTAAACTGTTCGAGAGTCATCTAGAAGGTCTAGGTCTGCAAGATTCGTACAAGACATAATCTTTGGCAAGTGGGAGAATTGTAAGAGGTATATTTTTATACTACTATGTAATGGGTATAGAGATGCCCTAGTTTATTGTATTTGTACTAGGTTATTAATACAAAGTATTTTATTCATCCACTATTGTTATAGATTCTTGTACATCCCACTACACTAGAGTTTTAGTGCAAGTGGGAGATTGTTGGGGTTGGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAATGAATGTAAACAAATTGTATACTTGTTTCAATAAATTGTTATTGAGTTTCTACAATAAAGTGTTATTGTTAAGTATTGCACAATATGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTGTATGTAACTTGAACTAGTATGTGGGGACATACGGGGATCGTTGTTCAAGTAACAACCTAAGAGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGATACTATGGGTACTACCCACTCTGTATTTGATACAAACACAATGATCCAAAGCGTTCATGTAGGGGACATGCGAGTGGGGGTATCTTGTGCAATGAGTTTGCATAAGATCGGACTGTGAAATAGTAACCGCTAGCTATAACACCGTTAACTAGTTAGGTTTCTATTTCACTAGGATGACCTAGTCAACTTAGTCTGAATCCTGAGTGGATTTTGGACTTCTGTTCACAAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAAAACGCCGACTCAATAAGCCTATCATTTTGGGGACAAGACCGAGTGGGGAGCTAGGAACATAATCACACAAGATGGAATTCACTCCTTCCCGACTTTGAGGAAGTAGATGAGTGTTTTCTTAAGTGCTTTCTCCAGGTCTTTAACAAAGGTCCTACTCTCTCACTGGGCCGAGAAGGGTTTCTGTTTGGTGGTTGGACCACAAACAAGTTGTTCATTAGAGGAGCATTGGTACTTAAGAAGGTTGAGGTAACTCAGGAGTAAAACGGTAATTTGACCCAGCTGGAGTTACGAACACTCATGAAGGACTAACTTGCTGTTACTGGTCTATATCTGTGGACACTAAATAATGTTTGTAGTGAGAAGAGTGCAACTTTGGGTCTTTAGTGGTGTGAACCCACAGTTACGAAAAAATATATTAATTGGTTAATGAGTTTAGCGAATTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACCGGTAGCTCCTAAAGAGACTTGAGGCAATTAAGTATTAATTGTAAATTGAAAGTGCTCAATCCATTTAGTGAAATCATATAATGTATGTTGATGCATTATAATATAAAGTTTATGAAAGTTTATAATATAATTTTTAATTAGTTTCAAAATTAATTTTTGAGAGAAAATATTTGAAAGAGTTCAAATAGTTAATATAAATTGGATTCATATTAATAAAATAAATAATTTAATAAAATCCCTAAAATTAAATATATGATATTTAATTGGGTAATTAATTGATTATGAAATTAATTAATTAATTATTAAAATTAGATATGAATAAGATAATAGATTTGATTAGATCTTATTCATGAACTTTCCTATATGGATTAGATCTTATTCATGGTCGTTTCCTATAAATAGGACCCCTGGGGTGGGGTGAAAGACATCACATTCATTCTCCTACTCTTAAAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCGCTAGAAGTCTCAGAGTCATATCGTTGTAGCCATAGTGATGGTATTCGCAAGACTTGGTCGTTGAATTTCCAGTGAAGATCGTGCTTAGTTGCTGCGTTTTGCATCTAAGAGAAGAATCAAGAGTTTAGGTGAAACAGTCAAGTTACCAACGACGGTATGTTGGTCAAAACCTTTTTCTCTAAACTTGCATTAATTAAATAGACTTTAATTCAGTAAATTATAGCATTCTTTAGATATATTTACAATAGATTATGCATGATAATTATTGTAAATTTTTTCCCTTCGTATTGGTATTTTAATCTAGATTAAAACACAGTCATAGGTCCTCTGATAAATCTTTCGTTCCACTAGGGATTTAATTCCTACAATTGGTATTAAAACATCATTGTCCCTTTTAATCGAGATTAAAAGTTGCGATTGGCTCTGATAGGTGGGATTGAATGCATTATGAATGTTGGGATTGCGTTGAACTGTTTAGGTAATTTTGGTATTAGATTTTGTTATTTTATGTGAATTGTTCATGTAAGGGCCTTGTCTTTTTGGCATAAATTGCAAATTCAGAGATTGTAAGTCCGGGTCTAGCATAGAGATGTCGATCATTGAAATCATAGATGAATTTGAGGCCAAAATCATGAAGAACAATCGTGGATCGTGCCCAAAAATTGCTCCAGACACAACCGCGTCCAGACGTTGTTCATCAACGTCGCGACGCTGTCGCGATTCCAGGCGGTGCGGAAAATTCGTAGCGTCGAGACGCTGGTTCTAGCATCTCGATGTCGTCATGTGAAGCAACAGGATTAGGGTTTTGAATTGCATGCATAAACCCTAATTTGCGGTTAGGTTCACTAGGATCTATTTGGTCCAGTTCAACCTGGTTTAGCTCGGTTCGTGGATTTCGAGGCTAGTTCGAAGAGGTTCGAGTCGGTTCGGGCGGTTTGATCTGGTTCTGAAGCTGCAAAATTTTGTAATAGGATAGAATTTAGCTTTATTAAGTGTAATTTAGCTTCATTTTATCCTAGGGGCCAAATAAATCGGTTCAATTGCTATTTATATGCTTTATGGATGTCATATTAGAATCTCACCTTAGGTTATAAGCATGCACATGCATTTTATTATATTATAATTGTTATAATGTATGGATTAAATGCATGGACATTTTTATGAGTGATTTAATATAGGTGTATATTAAATATATTAAAATGAATTAAGCATGAAGCTGAAAGTGTTAATATCTAAAACGCGGAAGCAATTTTGGATCTTAGGCACTTAATAAGCTCAATTTAACCATTCTTTGCATGTTGTTCTTGAGAAGGAAAACAGAGATAGAATACCAACTTATTTTAAATGGAGAAATTGGTTGGATTCTTTTGTTGTTTTTCTTCACCAAGGTATCACAAACCACCACTGGATCTTCGTTGCTATCCTCAAGCCTTTGGAATGGATTGTAGGATCCTCAAGTGATGCAATTAACCACAATTAAGTGGGAAATTAAGTGGCTTAAGTGAGGGGGAGTGCATGGGTTTAGTCACCATGCACTCCACCTCTAAAAAATCAAATAATTTTGATTTAATTAAATCCAAGACTATGTTGGATTTAATTTCTTAATTATTTAATTTAAATAATCTAAAAATATAAAATCCAATTTTAATTTTCCAATTTTAAATTAATTCAAAATTAATTTAAAATAATTATTGATTAATTTAATATCTAATATTAAATTTATATTTTTCCATCAATCCCGAACATTTCTGAAATGTTATTTTTTCAATCATGAATCCTTATTCATGTCCTCGGTATTTAAATAATAGTTAAATATTAAATATCTCACAACCTGGTTTTCACAAAACCTGACAAATCGATAACGTCAACTACCTCTAACCATTTCCCTAAACTGAATTCGAAGTAATTCATATTCTATCCATCATATTGTTCCAAAGGTTAGTGTCGAGCTAGCAAGGGGACCTAATCGACCTACAGATCATGGGCTCCAACGGTACGAGGTTTAACCGACCAAACCCTTTTAACCTAGTTAACCAACATCTGTTAACTACCGGGACACTCGACTACAGCCTAGTAGTTGAACTCCTCTCACTATAGATATATTTCAGTCCACTCGATATAACCATAATTAGTAAGTCAATCCTTCACAGGTCGTTTGTTACTATAGTTAGGTCAATTGTTCGTTTTACCCCTATAGCACATCTTTGCTCCTTAAGTCCACTGGTCCTTTAATGAACAATTTGTTTATGGTCCAACCATTAAACAGAGTCCCTCTTGAGCCAATGAGAGGGTGGCGCCCCTTGTCCAAGCCTCGGAGTCAACACTTAAGGGAACAACCTTTCTACTATCCCTGATTCAGGTAGGAGTGAATTCCATCTTGTTATACTATGTCCCCAGCTATCCATCCAGTCTTATCCCTAAAATGGTAGGCATATTGGTAAGCGCCATTGGGTCCCTCTCACCCATGCAGATCAAAGGATAATCCTAAATGAACAGGAGTTCATAGTAAGCTCAGGATTAAGATCGAGTTACCTAGGTCATTGCATGAAATAATCAGTCTTAACAGTAAACGACATTATAAAGTAAGAGTGACTTATTTCTTGGTCCTTGTGTAAACATCTTTTACACAGGATGCCCCTATTCGCATGTCTCTACATGAACGATTCAGGATCACATCGTTTACCTTATTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGGATAAGGTATCTAGCCTTATTCATATACTATAGACCATTTCGGTTATATATTCAAACTTGATCCCTGTCCATATCTACGATATAGTTCGAGAATTTCATATTATAGCCATGGATGTTTCCATTGGATTTAAAATATGAAATAAACAATTCACTGAATAACATCTTTATTATAAAAGGATTTACAAAACTTGAGTTTTAGGACATAAAACCCAATAGAAGCATGATTACTTAGATTAAATATAAAAAGTTATGTTTAAGCTGCTGAATGCAGCATGCTTGTGTGATTTTCTTGTTTGACAATAATATAATTGTTATATTAATAATAATAAGAAAATCAACGATGCATGGAGCATGAAACATCCATATTTATTAATATAATGGTTATATTAAAATTCATGCGATGCATATTATATGGTTTGATAATTTATTGTTGCGGTTGGTGCCCTAAAACTCGTAGATAGTGAATGAAACAAATAGTTATATACTTGTTCGATAGAGTCGTTATTGAGTTTTTTCACTCAAGTTATTTAATGAGTGAATTGCACATTAAATAAACCAAATCCAATAAACTAGTATCCTTGGCTATGACATGAAATGCTTGAACTATATGTAGTGACATAAAGACGGATCAAGTTCAAGTAATAGCCTACACGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCTTAGGAAAGCTATGTGACACGACCCACTTTGTATACAGTGCAAACGATGTGATCTTGAATCGCTCATGTTGAGACATGCGAGTGGGAGCGTCCTATGTAAAAGAGTTTGCATAAGACCAGAACCGAGAAATAAGTCACTCTTGCTTTATAACGCCGTTTACTGACAAGACTGAATATTTCAATGCGATGACCTTGGTAACTCGATCTTAATGGTGAACTAACTTTGAACTCCTGTTTATTCGGGATTGTCCTTTGATTTGCATGGATAAGAGTGGCTCAACATCGCCGACTCAATAAGCCTATCATTTTGGGGATACCGGGTAGATAGCTGGAGACATAGTTCTACAAGACGGAATTCACTCCTACCCAATTCAGGGATAGTAGAGAGGTTGTTCCCTTAAGTGCTGACTCCGAGACGTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGTTTTAGGTTCAGTGGTCTACCACAAACCAATTCTTCATTAGGGACTCAGTGGAGACTTAAGGAATAAGATGTAACTTCAGGGGTAAAACGGATATTTGACCTAGCTCTAGTTACGAACAACCTGTGAAGGGTTGACTTACTAATCATGGTTATTGTTGGGTTCCTAGAGTGAGTAAAAATAAGATGTAAATTGACTCTAGACTCTGTGCAAGTATACACAGTCTGCAGAAAGTAATAAGTATTATCAATCCAAGGCCTGAACTCGCTTCCACTTTATCTATTTTGTATAACTTTTTAATGGTTTCAAAGATGGTAAGAATGATTGGTTTTTATAAGAATAATGCTGAAACAAAAGAAATGACATAACAGTAAATAAACAAATAGGCAGACAGATTAGAAACAGGCGTTGGTCAGGATTTAGTAATTGTTTTAAAAGATGCTCTGGCAATATTATTGATCATGCAAAACTCTCGCAGTCTTATTAGCGGATTCCTCCCGAACACTACTACAAATTAGAGCTTTAATGACGGTCTAAAAAAAATGGGCAAGGGAAACAACGACGGACGAGAAAAAAAAAGTGCAGAAGTGAAAATAAAAATTTTAAAACACCTACAACGACGGTCATTGCCCCTTTTCATCTTCCCTCAGAACACTACAATCATTCTCTCTCCCCGATTTCTCTCTTCCCTACTCACCTCATTCATCAGCAACGCAACCTTTTCCTTTCGCCGGTGGTGTCTCCATCTTTCTCACCATCTCGTCATGGGTTTTGGCTTTGGTTTCTTGTGGGATTTGGGTGTGGATTTCTCACGTGATCACCGCTCATGGTTAGTCGTCGATGTAGGTTGTCGTCGTCGATGTTAAGCGTGGGTTTGTTCATCGTCCGTTCAAATTGTCACTGCTAATAGTCTAGATCTGTTGCTGCTATGGGTTTAGATTTAGGTTTCATGGGTTTGTCCACCGTTTTCTAGATATCTATCGTTGTTGTGGGTCTAGATCTAGGTTGCGTGAGTTTAGATTGTGGGTTTGTTTTCCAGTTTCTTGATATTCGTCACCGTTGTGGGTTTAGATTTAGGTTTCGTGAGTTTAGATCGTGGGTTTATCGGCCATTTTTTTATAGTCTTTTCTTCGATGGTCATTTGGACAGTTTAAACTTTGCTTTGTTCTTCGATTGCTTTAGATCTGACCCATCTTCGCGTGAAATTCTTTCATATTTTCTAGAAATTTTATATTTTTCTTTATTTTTTATGGTTGTTTCTCTCCTGTATCTTTGTGCATGTCTGATTTTGAATGCCTGCAAAGGTTTATGAGATTCTGAAGAAAATGAATGAACATGGAAATTAGTTGTGCAGAGCCTTGGAAATTAAAAAAAAAATGCTTAATCATTTTGTTGGTTTTGTTGCTCATTAGAGAGAAATTTTGGATTTGATTGTCTTTGGAACTTAGCTGCTGAAAGGAATGCAAAATTTTCTATTTTGAAATGAGTCTTATTTCCTTTATTTTCTTGGCTGGCTAATTTCCCAAGAAGATTCTATGAAATCTCTCTTTGAAAGTGAAGATATTGTTCTTTGGCATCAAATTCTCTTTTACACCGTCTTCATTTTCTTAAAATACTTTTTGGATTATATATATTGTTTTGTAGACGTTGATTGCTCTATTTTGCAGTTTATAAAAAGCTACAAATTTGCACCCAAATAGTTAGGTATTCTGTTTCTTTCGTCATTTGAAATGCTACTTTTCTTTAGTGTACTGGCTTATGTCAAATATTGAATGAATGTAGGTTGTTATAGTTCTTTGCCTTTTGTATTCAATACATCTCATCAGTTAGCTGTTTCTTGTTACTTATTTTCTTGATGGTGGTTGAATTTTGTTTAGATCATGGCACTCTTGAATGGATACGTTGGGGTGTATAATGAGGTGAGTTATTTATGTTCAAGATCAATACTGGCTAGAAAAATATTATTATGTTTTTCCTTGTAGAAAGAACGGTCATTATGTTAAACAAATTTATGTTCAAAATGTTTCATCTCGCTACTAAATAGAGAAACATGATTGACTTCATGTTTCCTTTCCGTTTCCTAAGATACCTTGAAGAAAGTGATAAGACAGTTTCATTAAGTTAATATCTTATTGTTGCTTTTTCATTATGTTTGAATATTTTCTTTTGCAGACTATAATTAAGATATGTCCATGTAAAAAATTTCTGATGGGATGGCGTTCTATGTTATAGTCATGCTAATCCTAGAATTTGATGCAATCATAAGTAATTTGAGTTTCTAATTCTGCCCTAGTGCTGATTATTTACTCTCCTTTCCCTCCATGATTTTGAAGACACTAATTTATGACTTCGATCTAGCTACTTTTATTTTTTTTTGTTTGGTAAGATTGGTTTCTTTTAGTATTTCATACCTAGAAAACTTTAAATTTTTTTTGCCACTTAACAATATGTTTTTCGTCAGAGGATTATTTCATGGTTACTCATTTATTATAGTTCTCATGATTTTGAATCATGCTCTCAGGTATAAAAAATAGCTTTCTAAGGCTTATTTCTACAGTGTTTTTGGTTTTATTTGTCTCTTTGGTACGAAACATGTTTTCCGTTACTGCTGTTACTGGCTTTGATATCTCTGAATTTTATTTCCACATGTTGCATAGCTCTTCTAGTCTTCTATTGCATGAATCGTGTGTTTCAATTTTTATCATGGCATCTTTACAATATATTTATTGATATGATAGATATATTTATTGATATGATAGATTCTAATGGCTAAAAAGATTACCCAACTAAAACAATACTGTACAAGAGATAATTTTGGGGATCAATAACTTATCAAGTGTCCAACTTGGTAGTTTTTTTTTCTTTCTTTTATATATATGATATTAACCATTATTAATCATGCAGAAAAGGCCAAGTCCACACCCACAACAAAGACACAGAGCAATAGTAGATCCGTCATTTTCAGAGAAGAAGGTGTTGGTATATAATGAATTCAACATTTATTTAGATAATTTGCAAATTGGGGACTCTTCTTCAAAGCAAAGAAGAGAAAAGGTCGTCTGTCAATGGTTGCTCTTCTTCACAAGGTTGCTCCAGTAATATTTATGAGACCTTAGTTCTGCAACCTCATTTAATATTCTTTATCCCCCATTGTTTCAGCTGAGCCTCCACACATCTCCTCAATTTTGAATCTAATCTCCAGCATTCATTCATATCCCTTCTAACATTGAAAACTGCATCATCAACTGAACTCTCAAGCCCCTTTCTTTCTTTCAATGGAGTTTCTAATAGGAAATATTCCATTGTTGAGTTTCTGTTTTGCACTTTGCAGTGCATTGTATTGTTGACTTTTTTGTACTGTTAAGTGGCATCCATTGAACGAGTTTTGCAGATTATGTTGCTTGATATTACATTTTGACATACAAATTTTGGTTGTGGTGGTCTTGTGTTGGCAATTGGTTTGTAGAAAAAATTGATCCATTTGTTTTCTTTAACTTTTCTGTAGTTGACTTGAGTGGATTTGTTACCTAGAGTAAATAGATTTGTAGCAATGTGATTAGAGCAGGACTTAAAGCAGGATTTCAACTATGCAAATTGTTTTGTCTTGTTGTTATCTGGTATGTTTCAGAATACATGGTCTCAAAACAAAACTTTAGCTCAGAGGAAGATGATCCTGAGTATGTCTCATTCAGGTAACCTTAATTCACCAGATAAGGTAACCAACGTGTTACAGTATGGAATTTGTGTTGTTCTAATTGATCAGTGTGTGTTGGGTTTGTAAGTTGTCTTTGTGTTTTTCTCAGGATCCTATTAAGTCTTTGCATTTTAGCAATTCAAATCCTATCTGCCATGTGTTTGATCTTGAAGCTAAGGATGGTCATGACCTACTTATTGGATTCAATTTTGGAGATGGTAAATATGTTTTTCTCTATATATGATTTGTGTTGGTTGTTTCTGGATGAAACTGTGTTTGAATTTCTCATTCTCTATGCATACTGTAGTCTACTTGGTTTCTTTAAGACAACAATTACAAGATGTTGGGAAGAAGCTTGTTGGTGCCCAACATTATAACAAAGAGGGCACTGTCAATAACGGGCAAGAGCATTAG

mRNA sequence

ATGACTCGACTTCCTGCTTTATTTCTCGTCTTGGTCTCGCTTCTTCTCAGTTCGAGGCTTCAATCTTTGGCTTTTGGTGTCACATTTCAGGCCCGCTTCAGCACAATTGGGGATAAGGCTGGGTACCTTATCCTGGTGATACTATGGGTCTTTAACAAAGGTCCTACTCTCTCACTGGGCCGAGAAGGGTTTCTGTTTGGTGGTTGGACCACAAACAAGTTGTTCATTAGAGGAGCATTGGTACTTAAGAAGGTTGAGGACCCCTGGGGTGGGGTGAAAGACATCACATTCATTCTCCTACTCTTAAAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCGCTAGAAGTCTCAGAGTCATATCGTTACACAACCGCGTCCAGACGTTGTTCATCAACGTCGCGACGCTGTCGCGATTCCAGGCGGTGCGGAAAATTCGTAGCGTCGAGACGCTGGTTCTAGCATCTCGATGTCGTCATGTAGGAGTGAATTCCATCTTGTTATACTATGTCCCCAGCTATCCATCCAGTCTTATCCCTAAAATGGTAGGCATATTGGATCACATCGTTTACCTTATTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGGATAAGCAACGCAACCTTTTCCTTTCGCCGGTGGTGTCTCCATCTTTCTCACCATCTCGTCATGGGTTTTGGCTTTGGTTTCTTGTGGGATTTGGGTGTGGATTTCTCACGTGATCACCGCTCATGGTTAGTCGTCGATATCATGGCACTCTTGAATGGATACGTTGGGGTGTATAATGAGAATACATGGTCTCAAAACAAAACTTTAGCTCAGAGGAAGATGATCCTGAGTATGTCTCATTCAGGTAACCTTAATTCACCAGATAAGGATCCTATTAAGTCTTTGCATTTTAGCAATTCAAATCCTATCTGCCATGTGTTTGATCTTGAAGCTAAGGATGGTCATGACCTACTTATTGGATTCAATTTTGGAGATGTCTACTTGGTTTCTTTAAGACAACAATTACAAGATGTTGGGAAGAAGCTTGTTGGTGCCCAACATTATAACAAAGAGGGCACTGTCAATAACGGGCAAGAGCATTAG

Coding sequence (CDS)

ATGACTCGACTTCCTGCTTTATTTCTCGTCTTGGTCTCGCTTCTTCTCAGTTCGAGGCTTCAATCTTTGGCTTTTGGTGTCACATTTCAGGCCCGCTTCAGCACAATTGGGGATAAGGCTGGGTACCTTATCCTGGTGATACTATGGGTCTTTAACAAAGGTCCTACTCTCTCACTGGGCCGAGAAGGGTTTCTGTTTGGTGGTTGGACCACAAACAAGTTGTTCATTAGAGGAGCATTGGTACTTAAGAAGGTTGAGGACCCCTGGGGTGGGGTGAAAGACATCACATTCATTCTCCTACTCTTAAAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCGCTAGAAGTCTCAGAGTCATATCGTTACACAACCGCGTCCAGACGTTGTTCATCAACGTCGCGACGCTGTCGCGATTCCAGGCGGTGCGGAAAATTCGTAGCGTCGAGACGCTGGTTCTAGCATCTCGATGTCGTCATGTAGGAGTGAATTCCATCTTGTTATACTATGTCCCCAGCTATCCATCCAGTCTTATCCCTAAAATGGTAGGCATATTGGATCACATCGTTTACCTTATTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGGATAAGCAACGCAACCTTTTCCTTTCGCCGGTGGTGTCTCCATCTTTCTCACCATCTCGTCATGGGTTTTGGCTTTGGTTTCTTGTGGGATTTGGGTGTGGATTTCTCACGTGATCACCGCTCATGGTTAGTCGTCGATATCATGGCACTCTTGAATGGATACGTTGGGGTGTATAATGAGAATACATGGTCTCAAAACAAAACTTTAGCTCAGAGGAAGATGATCCTGAGTATGTCTCATTCAGGTAACCTTAATTCACCAGATAAGGATCCTATTAAGTCTTTGCATTTTAGCAATTCAAATCCTATCTGCCATGTGTTTGATCTTGAAGCTAAGGATGGTCATGACCTACTTATTGGATTCAATTTTGGAGATGTCTACTTGGTTTCTTTAAGACAACAATTACAAGATGTTGGGAAGAAGCTTGTTGGTGCCCAACATTATAACAAAGAGGGCACTGTCAATAACGGGCAAGAGCATTAG

Protein sequence

MTRLPALFLVLVSLLLSSRLQSLAFGVTFQARFSTIGDKAGYLILVILWVFNKGPTLSLGREGFLFGGWTTNKLFIRGALVLKKVEDPWGGVKDITFILLLLKNSPEGSHQSPAARSLRVISLHNRVQTLFINVATLSRFQAVRKIRSVETLVLASRCRHVGVNSILLYYVPSYPSSLIPKMVGILDHIVYLIRKVGRIHSVTRISNATFSFRRWCLHLSHHLVMGFGFGFLWDLGVDFSRDHRSWLVVDIMALLNGYVGVYNENTWSQNKTLAQRKMILSMSHSGNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKKLVGAQHYNKEGTVNNGQEH
Homology
[Close]
BLAST of Spg015648 vs. NCBI nr
Match: XP_022997935.1 (WD repeat-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 145.6 bits (366), Expect = 8.4e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. NCBI nr
Match: XP_023523294.1 (WD repeat-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 8.4e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. NCBI nr
Match: KAG6607184.1 (hypothetical protein SDJN03_00526, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 8.4e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. NCBI nr
Match: XP_022948722.1 (WD repeat-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 145.6 bits (366), Expect = 8.4e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. NCBI nr
Match: XP_022156951.1 (dystrophia myotonica WD repeat-containing protein-like [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-30
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY +SLRQQLQDVGKK
Sbjct: 177 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSISLRQQLQDVGKK 236

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 237 LVGAQHYNKEGTVNNSR 253

[Close]
BLAST of Spg015648 vs. ExPASy TrEMBL
Match: A0A6J1KBA4 (WD repeat-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492734 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. ExPASy TrEMBL
Match: A0A6J1GA15 (WD repeat-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111452306 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-31
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 241 LVGAQHYNKEGTVNNSR 257

[Close]
BLAST of Spg015648 vs. ExPASy TrEMBL
Match: A0A6J1DWI2 (dystrophia myotonica WD repeat-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111023781 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-31
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY +SLRQQLQDVGKK
Sbjct: 177 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSISLRQQLQDVGKK 236

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEGTVNN +
Sbjct: 237 LVGAQHYNKEGTVNNSR 253

[Close]
BLAST of Spg015648 vs. ExPASy TrEMBL
Match: A0A5A7UNI0 (Dystrophia myotonica WD repeat-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00080 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEG+VNN +
Sbjct: 241 LVGAQHYNKEGSVNNSR 257

[Close]
BLAST of Spg015648 vs. ExPASy TrEMBL
Match: A0A6J1HZM7 (dystrophia myotonica WD repeat-containing protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469558 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 286 GNLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKK 345
           G+LNSPDKDPIKSLHFSNSNPICH FD EAKDGHDLLIG N GDVY VSLRQQLQDVGKK
Sbjct: 181 GDLNSPDKDPIKSLHFSNSNPICHAFDPEAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKK 240

Query: 346 LVGAQHYNKEGTVNNGQ 363
           LVGAQHYNKEG+VNN +
Sbjct: 241 LVGAQHYNKEGSVNNSR 257

[Close]
BLAST of Spg015648 vs. TAIR 10
Match: AT3G53390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-30
Identity = 66/119 (55.46%), Postives = 80/119 (67.23%), Query Frame = 0 

Query: 249 VDIMALLNGYVGVYNENTWSQNKTLAQRKMILSMSHSG-----NLNSPDKDPIKSLHFSN 308
           V   + ++G     N NT   N     +   L  + S      +LNS +KDP+KS+HFSN
Sbjct: 118 VSTSSRISGSFAASNSNTSMTNTNFDGKGTYLVFNVSDAIFICDLNSQEKDPVKSIHFSN 177

Query: 309 SNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKKLVGAQHYNKEGTVNNGQ 363
           SNP+CH FD +AKDGHDLLIG N GDVY VSLRQQLQDV KKLVGA HYNK+G+VNN +
Sbjct: 178 SNPMCHAFDPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVSKKLVGALHYNKDGSVNNSR 236

[Close]
BLAST of Spg015648 vs. TAIR 10
Match: AT2G37160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 287 NLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKKL 346
           +LNS DKDP+KS+H SNSNP+CH F  +AKDGHDLLIG N GDVY VSLRQQLQDVGKKL
Sbjct: 161 DLNSQDKDPVKSIHISNSNPMCHAFHPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVGKKL 220

Query: 347 VGAQHYNKEGTVNNGQ 363
           V AQHYNK+G+VNN +
Sbjct: 221 VSAQHYNKDGSVNNSR 236

[Close]
BLAST of Spg015648 vs. TAIR 10
Match: AT2G37160.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 287 NLNSPDKDPIKSLHFSNSNPICHVFDLEAKDGHDLLIGFNFGDVYLVSLRQQLQDVGKKL 346
           +LNS DKDP+KS+H SNSNP+CH F  +AKDGHDLLIG N GDVY VSLRQQLQDVGKKL
Sbjct: 190 DLNSQDKDPVKSIHISNSNPMCHAFHPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVGKKL 249

Query: 347 VGAQHYNKEGTVNNGQ 363
           V AQHYNK+G+VNN +
Sbjct: 250 VSAQHYNKDGSVNNSR 265

The following BLAST results are available for this feature:
BLAST of Spg015648 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022997935.18.4e-3189.61WD repeat-containing protein 20-like [Cucurbita maxima][more]
XP_023523294.18.4e-3189.61WD repeat-containing protein 20-like [Cucurbita pepo subsp. pepo][more]
KAG6607184.18.4e-3189.61hypothetical protein SDJN03_00526, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948722.18.4e-3189.61WD repeat-containing protein 20-like [Cucurbita moschata][more]
XP_022156951.11.1e-3088.31dystrophia myotonica WD repeat-containing protein-like [Momordica charantia][more]
BLAST of Spg015648 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KBA44.1e-3189.61WD repeat-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492734... [more]
A0A6J1GA154.1e-3189.61WD repeat-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC1114523... [more]
A0A6J1DWI25.3e-3188.31dystrophia myotonica WD repeat-containing protein-like OS=Momordica charantia OX... [more]
A0A5A7UNI01.2e-3088.31Dystrophia myotonica WD repeat-containing protein-like OS=Cucumis melo var. maku... [more]
A0A6J1HZM71.2e-3088.31dystrophia myotonica WD repeat-containing protein-like isoform X2 OS=Cucurbita m... [more]
BLAST of Spg015648 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53390.15.8e-3055.46Transducin/WD40 repeat-like superfamily protein [more]
AT2G37160.12.9e-2976.32Transducin/WD40 repeat-like superfamily protein [more]
AT2G37160.22.9e-2976.32Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 235..363
e-value: 1.1E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR14107WD REPEAT PROTEINcoord: 286..359
NoneNo IPR availablePANTHERPTHR14107:SF23WD REPEAT-CONTAINING PROTEIN 20-LIKEcoord: 286..359

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015648.1Spg015648.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding