Spg015517 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015517
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Locationscaffold10: 10774270 .. 10782657 (-)
RNA-Seq ExpressionSpg015517
SyntenySpg015517
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGCACAAAGCCCACCACCGACAACCACATTTTTCAGCCCAATTTCATTTCGTTTCTCCATCATTTTCCATTCAAACTTTCAGAGCACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGTTCATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAAACTGTCAACCTCTGGTTTTGTTTTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCTAACAAATTTCATGAAGGAATCTTGACCTAAATCGTATGAGAAGTGGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCTAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTGTTCAATTATCTACAACTTCCATGAAGAATTTGTGAGCCAAAAATGACTTGACGTAGGTTTAATTTCAGGAGGAAGATAAAGGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACACATTGGTTGGGAATATCATTTTCATTTATTCAGGTAAGTTGTAGAGTGTTCGAAAAGGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTAAGTATCGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAATGGTTGTTCATGATTATATGTTTTATATGCTTTACCATGAATGATATATGATTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAATAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCATGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGGTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTCGTACTGGGCGTGCCCTACACAACGTAAATCGGTCATGTTAGTTAAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTGGAAAGCCTTTATTATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGGGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTTCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAGCGTTTCAATAGGGTCAACAGGGATCGTTAGAGGTGACAATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGCTGTCCGGGAGGGGGTGTGACATATCTTGCTAAGAAAAAGATGGCAAAGTAGATGAAAACAGTGTACCTCACCTCCACTTGCAGCGCTCGATTACAGCAGCAAGTGCCTGACAAACTTACTGATCCAGGGAGTTTCTCTATTCCCTGTAGTTTTTGTACCTATTCTTTTCGGGCTTTATGTGATTTAGTTGCTAGCATAAATATCATGCCTTTATCTTTATATAAGAAATTAAATATAGGAGATATTAAACCTACTGCTGTGAAACTACAATTGGTTGATCAGTCTGTTGTCAGCCCATGTGGAATAGTTGAAAATGTTCTTATTAAAGTAGGTAAATTACTTCTCCCTGTTGATTTCTTTATTACGAATGTTAAGGAAAACCCTGCAGTCCCAGTCATATTAAGGAGACCTTTCCTTGCCACTGGGCGAGTCATTATTGACATAGAGCGTATGGAGCTGACTCTGAGAGTCCTACATGAGAAAAAAGTCTTCAAAGCATTCATGGATTCTAAGGATAATTCGAGCGCTATGGTGGTGGGTTACAGGAAAGGTGCCAGCAAAAGCACCATTGATGGAGCGCCTGACATTAGACCTCCTTGATGCATGCACAGTCAACACGTCGAGCTAAAGATGTTAAACAAGCACTTATGGGAGGCAACCCAAGGTAGTTTTGTTGTTGTTTTGTCATTTTTTTTATTTTATTGATTGTTTTTGGTTTTATAGGTCTTTGGATCTTGTGGCTTTTGGCTTGTAAGCATCCATGAGAAGGTCATCATTCCAGGGCAGTATTGTTCACCCCTTCCACTCTTTTCTTGTTCTCATACTTGAATATGCTCTACTTTTATATACATTGAGGACAATGCCCTTGAGCATCTTATTTCGGGCTATATTTTTTGAGCTTATTGTGAATTTGCCATATGGTTGTTTTTTTTTGGATGCTATTTTTGCATGACTATGATGTCATAGGATAGGCTTTCTTGTCAATCTTTAAGCTTTTGATGAGTTGTTAGCATGATTGCCCAAAAAGGGAGACTTTTTAAAATTTTTCTAGGAGATGTCTTGCATTAGTGGAGTATTTTCCTTGGTTAGAGTTGGACTTGAATGCTTAGAAGTGAATTATTAGGTTCATATGCTCGTTTTCATTTCGATAGAAGTGAATTATCATGCTCATAGAGAAAAATCATTCTTGTCTTTACTTTTGAAAGAAAATAATGTCGGCTTGTGTACACCATATGCAGTGAATAATAATGTTTTAGACAAAAAGAGCCACCCTTATTGTGATCAATTAGGCCAACCCTAAATTTGGGTTGTGGGTCCCTACAATAGGTGTGTGAAAGCTAGTGCCACTTTTAAATTGCTTAATTTAATTGAAATCTATAAAAGCACCTACGTATGGATGAAAACAAACTAATTTGTTTTATTGGCTCATTAGTAAATCCTTAGTGCCAGTGTAGAGGGAAGATGAGTTGAGAGTTTAACAATCCAATCCCGAGCTAGTAGAGTCTAATCTAATTAAGTTAGGTCTCACTTATTCAAGTTAATTTTGAAAAAATTTCGATTTGTCAGCCTCATTGAGCCTTATGTGCATGTCTCTTGATTGCTTGATTATTAACTTGTGAGCCTTGAGGATTGAGTCATGTTTATTGCATCTATTCTTCAACCTATGTTTGATTTGTAGTTTGCTCGAGGACTAGCAAAAGCTTAAGTTTGGGAGTGTTTGATAGCGAGCATAGCAAGCTATTTTTCCTATCTATTTTAGTTAGTCTTGAGATTAAATCGGCCAAAATTATGCACTTTAATGTTTATTTTGTAGGAAATAAATTCTTGTAGGAAATGTTGAATTAGGAAGTTGATCGGGTGCTTGGGACCAAAAGAAGAGCAAAAGAAGCAAAAAAAAATCAAAGTCGAAGGCTTATAAATGAGGCAAGTCCGAGAGCTAGCGTCTCGACGCTACTTTCTGGGCGTCTCGATGCTAGCAATTTCCTTGTTTGATTCAGGCGGCAAAGGTTACAGCGTCGAGACGCTGTGACTATAGCGTCTCAACGCTCTCGATTTTTCCTTAAACAGAATGGGCGACAATCGGACAGTGTCACAACGCTACCCATAGCATCTTGACGCTGTCGACAGATTTTCTATAAATAAAAAGCGATTTGCTACGGCCAAGGAGAGTTCTTTTGGTGGATTTTTAACCTTAATTCCGATTAGAGACCTCTTGTGGGAGCCAGAGGAAGATTGGAGAGGGGGATTGAAGACAATAGCTCGAGGATATCGTCACAGAAACGTGCGGCATCAACGAGATTAGAGTTTTTATCTTTCTCTTTCCATTCTTTAGTTGTTGTTATGGCTTTTATCGTATCTAGCTTATATTCTAACACGAATGTTGAGTAGTTAGGCCTTTAATTCTTGGGATTGATGTAGCCTTTGGGTGTTATGGATTAATCTTGGATGTATTCTTTGATTTCATTTATGCACAGTCTTTTCTTAATGCTTTCAATTTATTGGCCATGAATTGAATGATGTTTTGTCTAAATCTTGCTTGGGAGAGGGGGTTTAGCTTAGATCTTGATATGCATAACTAGGATAATCTTAAGATTGGGAGATTTAAGACAATCTTAGAAATACTTAAAAAGGATTAGACTTAAGGCCTTGCATGCTAATGAGTTTAGATAGGGATATTGAATTCATTGCATGTTAGAAAATTATTTATGCTCAGGAGAGATAAATATGAATCTTGATATTCCTAGATTTTTGAATCATAACATGTTAAATCATCCAAGTAATTAATTCATAACCTTAATAGGTGAAGTCAATTCCCTAAGAGTTTTCCCTCCAATTGAATTCCCAATCTTTTAATTCTTGCATTAGATTCCTTTGCATCATTAAATCTTTATCCCTAAATAAAATTGAGTGAAACTATTCACGGTAATTAATCTAGTTAGAAACCAATCCAGAGGATGATATTTGATTTGAAAAATCACTATATTATAACTTGGCTCATACACTTGCGGTAAGAAAAATTGCGCATCAGATGGCGAGGGGCTACTCATTCAAGGGGCATCCTTCTAAAGATCCCTACTCACACCTTCGCTCGTTTATAAAATTTGTGGAACTGTCAAAACGAATGGTGTTACCACCGATGCAATTAGGCTAAGGCTTTTTCCTTTCTCTCTACAGGACAAAGCTAAGGATTGGTTGGAATCTCTGGCACCTAGGAGCATCAACACATGGGATGAGTTGGCTCAGGCACTCCTTATGATTTTTCCCTCCTGCTAGGACCACAAAATTCCATACTGAGATTGAGACTTTCAGGCAGAACGATGATGAGCAATTGTACGAAACTTGGGAGCGATATAAGAAGATGCTCAGGAGATGCCCACAGCATGGATATCTCGACTGGCTCCAGGTACAGTTATTTTATAATGGTCTTAGTAGTTCTACTAAAACTATCTTTGATACTTCTGCAGGAGGGAGTTTTCTTTCAAAGACGGTGGATAATGCTAAGGAACTGTTGGAAGAAATGGCATCCACAAGCTACCAATGGCCCACGGATAGAACCCCAGTAAAGTAAAAAGTTGAAATCTATGAGTTCGATGAGTCAAATTCCCTCAAGGCACAAATGGCTTCCTTCACAAATACCTTTAACAAACTGACGGCGTCGAAAGAAGTCAAATCGATTGCTTCCCTAGCCGAAAGCCATACAAAGAAAGAAGACCAAGAGGTGGAACAAGTACAATTTATTGGCAACCGAGCATTCAATCAGACGCAAAATTTTCCAAATTTTTACCACTCGGGTTTGCGTAGTCATGAGAATTTTCCTCACGCTAACATTAATCGATCTCGATAAAGCGTTATTTGAGTGATTCAGTAATTTGGTTATTGAATAATCGAGTTTGCATTAATAAACCCTAAATCCAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTGGACTAGTATGTGGGGACATACGGGGATCGATGTCCAAGTAACAACCTAAATGGTCTATAGTATAGGGATAAGGTTGGGTACCTTATCCTGGTGACACTATGAGATACGACCCACTTTGTATTCGATACAGATGCAGTGATCCAAAGCATCCATGTAGGAGACATGTGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAAACCGGAACGCGAAATAGTAACCACTAGATGTAACGTTGTTGACTAGTTTAGGTTTCTATTTCAATAGGATTACCTAGGTACCTCAATCTCAATCCTAGGTCTGTTATGAACCCCTTTTTAGGAGGGATTGTCCTTAGATTTGTATGGGTGAGAGTAGCCTATTCGCCGACTCAACAATCCTACCATTTCAGGGGCAAGACCGAGTGGGGGCTGGGAACATAACAATACAAGATTGAATTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCCGGGGCTTGAACAAAAGTGCACTCACCTCTCCTGGCCCGAGAGGAATTTCTGTTTAGTGGTTGGACCCTAAACAGGTTGTTCATTAGAGGGATCAGTGGTACTTAAGGATCCAGAGGTAACCCAGGGGTATAACGGTAATTTGACCCAGCTGGCGTTACGAACACTCGTGAAGGATTGACTTATTGTACTGGTCGATATCCATGGACACAAAAATATTCTACAGTGAGAAGAGTGCAGTTGTGGGTCTTTCGTGGAGTGAACCATAGTTAACGAATATTGATTAATTTTATTAATAAGTTTAGCCAATTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCATCGATAGCTCATTTAGGGCGTTGAGGTAAATTTCTAGGGGAGAATTGTATATTCGAAGGAGTTCGAATATTGAGATTGAAATATGAATTAGATTCATATTAAAACTATAGGTTATAATTAATGCGCATTGGATGCACACTAATACTATAGGTTATGTGAGAGAGATATAATTAAATATATGATATTTAATTGAAGAATTAATTAATTATTGAATTAATTAGTCTTTTTGTTTTAATTTAATTTAATTAAATTTGATTTAATTAAATTGCATTAAAACTATAGGTTATATGGGAATATTTATATAAATATGATTTATATAAATAAATTAAATCAATTGTTGATTTAATTGTTTAATTCAATAATTATTAATAATTTGGTTTTTTAATAATTTTAATTAATTTGATTCATCAGTTGTGATAACTGATAAATCATGGTTTTTCCCATTAACTGCCTGATGCACATAAAAAGATGAGAGTCTTAAGGAGAGAGTTAAGTTGATTGTGAACGCTCTCTCAATTGGCTCTTTTTCCCTCACACTCTCTCTCTCTGGTTCTCCAGTATTTTGAGCTTTTTCACAGAATCCCTTTTCTCCCTAGAGATTTTCTTTCTCCCACAAGAAACCTCACAAAGGCCTCTGTAGTCATACTGGTGAAATCTTGTGGTTGGTGTCATAGTGGTGAATTTTCCATCAAGTTAGAGGATCAAGGGGCTGCTGAAAATCAGAGAAGAAAACTTGGAGAATTTGGTGAAATTCGGTCAAGACTTAAACGGCGGTAAGTTTCTTCTTCATCCCTTTGATCCCTAGGCTTAAATCAAGATTAGATCTAAGGTTTTAATTCAAATTCAGCATGTTTATAGCCTTAATTTACATTTTTTATGTGATAAATATTGTTGTAATTTTGCCTCTGTATTGGTATTTAAAACGGATTTTAAAACAGTGTTTGGTTCTGTAAATTCTTCTGCTGCAAAAGGGTTTTTTATCCTTTCAATTGGTATCAGAGCCATCTCTGTCCCTTTAAAATTCATTTTAAATTTGCAGATGGTTTTGTAGGTGGGATTAAATTGCATTATGAATGTTAATTTGCTGTGAACTGGAGGTTTTTTGGCCTTGGATTTACTGTTTTTTTTATGCGATCAAAAGTGTAAGGGCCCCTGCGTTTTGGGCATTTATCAGTAAATTTAGTCTGTAAGTCCATGTCTAAAAATAGGCTTGAATAACGATGAAGATCAGGACCAAATTTGACCAAAAACGGCGGAAAACGATGGCAAAAATCGTGAATTTGGTGGCTGAAAATCGTAGGAAATCGAAAAAAAAATCGGAAAAGTGCTTCAGGCACAAGGGCTGATGTCAACGAGGCGCGGTTCAGAGGTCTCAGGTGCGCACAGTCCTGCGACGTCAGCGGTTCGGTCCGTGAAGAGGCGCGGTTCGCGTCTGGTTCCTCCGATTCGTTGACTATATCGCTGGTTCATTGA

mRNA sequence

ATGGACAGCACAAAGCCCACCACCGACAACCACATTTTTCAGCCCAATTTCATTTCGTTTCTCCATCATTTTCCATTCAAACTTTCAGAGCACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGTTCATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAAACTGTCAACCTCTGGTTTTGTTTTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTAAGTTGTAGAGTGTTCGAAAAGGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTCTTTGGATCTTGTGGCTTTTGGCTTGCGGCAAAGGTTACAGCGTCGAGACGCTGTGACTATAGCGTCTCAACGCTCTCGATTTTTCCTTAAACAGAATGGGCGACAATCGGACAGTCCATTAGGTCCCATCGATAGCTCATTTAGGGCGTTGAGAATCCCTTTTCTCCCTAGAGATTTTCTTTCTCCCACAAGAAACCTCACAAAGGCCTCTGTAGTCATACTGGTGAAATCTTGTGGTTGGTGTCATAGTGGTGAATTTTCCATCAAGTTAGAGGATCAAGGGGCTGCTGAAAATCAGAGAAGAAAACTTGGAGAATTTGGTGAAATTCGGTCAAGACTTAAACGGCGGTGCGCACAGTCCTGCGACGTCAGCGGTTCGGTCCGTGAAGAGGCGCGGTTCGCGTCTGGTTCCTCCGATTCGTTGACTATATCGCTGGTTCATTGA

Coding sequence (CDS)

ATGGACAGCACAAAGCCCACCACCGACAACCACATTTTTCAGCCCAATTTCATTTCGTTTCTCCATCATTTTCCATTCAAACTTTCAGAGCACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGTTCATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAAACTGTCAACCTCTGGTTTTGTTTTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTAAGTTGTAGAGTGTTCGAAAAGGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTCTTTGGATCTTGTGGCTTTTGGCTTGCGGCAAAGGTTACAGCGTCGAGACGCTGTGACTATAGCGTCTCAACGCTCTCGATTTTTCCTTAAACAGAATGGGCGACAATCGGACAGTCCATTAGGTCCCATCGATAGCTCATTTAGGGCGTTGAGAATCCCTTTTCTCCCTAGAGATTTTCTTTCTCCCACAAGAAACCTCACAAAGGCCTCTGTAGTCATACTGGTGAAATCTTGTGGTTGGTGTCATAGTGGTGAATTTTCCATCAAGTTAGAGGATCAAGGGGCTGCTGAAAATCAGAGAAGAAAACTTGGAGAATTTGGTGAAATTCGGTCAAGACTTAAACGGCGGTGCGCACAGTCCTGCGACGTCAGCGGTTCGGTCCGTGAAGAGGCGCGGTTCGCGTCTGGTTCCTCCGATTCGTTGACTATATCGCTGGTTCATTGA

Protein sequence

MDSTKPTTDNHIFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKSSCKASHCRIWVQTVNLWFCFRFELHRRNQEVSCRVFEKEEFDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESFRSSSSTWLELYIESVMSGLHHVYVERSLDLVAFGLRQRLQRRDAVTIASQRSRFFLKQNGRQSDSPLGPIDSSFRALRIPFLPRDFLSPTRNLTKASVVILVKSCGWCHSGEFSIKLEDQGAAENQRRKLGEFGEIRSRLKRRCAQSCDVSGSVREEARFASGSSDSLTISLVH
Homology
[Close]
BLAST of Spg015517 vs. NCBI nr
Match: KAA0053276.1 (uncharacterized protein E6C27_scaffold102G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-28
Identity = 95/192 (49.48%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 4   TKPTTDNHIFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKSSCKASHCR 63
           TKPTTD  IFQ NFI FLHHF  KLSE+F+ERVK EEEEEFRGLRLKK+ K   ++   +
Sbjct: 145 TKPTTDKLIFQSNFILFLHHFSSKLSEYFKERVK-EEEEEFRGLRLKKM-KKFMQSQTLQ 204

Query: 64  IWVQTVNLWFCFRFELHRRNQEVSCRVFEKEEFDVPRGNRSSLQTGELDKT--------- 123
               T+NLWF            V   +   E    PRGNR SLQTG+LDKT         
Sbjct: 205 NLGATINLWF------------VLIGLSYPEGTMRPRGNRPSLQTGKLDKTVIFQLSTLS 264

Query: 124 -------------------VEIELPVPDTLPTSAESFRSSSSTWLELYIES--------- 156
                              VEIELP+PDTLPT AESF S+SSTWLELY ES         
Sbjct: 265 VLRDNDAVLILFKMFPTFQVEIELPMPDTLPTFAESFESNSSTWLELYFESVHVEMFCYL 322

[Close]
BLAST of Spg015517 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 7.6e-25
Identity = 93/225 (41.33%), Postives = 108/225 (48.00%), Query Frame = 0 

Query: 12  IFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKSSCKASHCRIWVQTVNL 71
           +FQPNFISFLHHFP KLSEHFEERVK EEEEEFRGLRLKKIGKSSCKA+HCRIW    + 
Sbjct: 56  LFQPNFISFLHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRIWSTGFSS 115

Query: 72  ----WFCFR-----FELHRRNQEV--SCRVFEKEEFDV-PRGNRSSLQTGELDK------ 131
               +  F       E+ + NQ++       +  ++DV PRGNRSSLQTG+LDK      
Sbjct: 116 KPRGFLVFSDALSILEVQKSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISID 175

Query: 132 ------------------------------------------------------------ 146
                                                                       
Sbjct: 176 YMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVN 235

[Close]
BLAST of Spg015517 vs. NCBI nr
Match: TYK04298.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-20
Identity = 86/206 (41.75%), Postives = 116/206 (56.31%), Query Frame = 0 

Query: 4   TKPTTDNHIFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKS---SCKAS 63
           TKPTT   IFQ NFISFLHHFP KL EHFEERVK EEEEEFR ++ +   +S   S K  
Sbjct: 15  TKPTTYKLIFQRNFISFLHHFPSKLLEHFEERVK-EEEEEFRAIQKELRDESTGFSSKPG 74

Query: 64  HCRIWVQTVNLWFCFRFELHRRNQEVSCRV--FEKEEFDV-PRGNRSSLQTGELDKT--- 123
              ++   +++      E+H+ NQ++   +   +  ++DV PRGNRSSLQTGELDKT   
Sbjct: 75  GFLVFSDALSIQ-----EVHKSNQKLYLDIESGKSGKWDVMPRGNRSSLQTGELDKTVIF 134

Query: 124 --------------VEIELPVPDTLPTSAESFRSSSSTWLELYIESVMSGLHHVYVERSL 183
                         VEIELPVPD LPTSA+S  S+S     +    ++ G    ++  S 
Sbjct: 135 LLSTLSVLRDNDAVVEIELPVPDRLPTSAQSSGSNS-----IGSTGIVRGDDVYWLTPS- 194

Query: 184 DLVAFGLRQRLQRRDAVTIASQRSRF 187
               FGLRQ++ R   +  +  +S +
Sbjct: 195 ----FGLRQQMVREGNIGDSVNQSEY 204

[Close]
BLAST of Spg015517 vs. NCBI nr
Match: KAA0040420.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-15
Identity = 64/129 (49.61%), Postives = 74/129 (57.36%), Query Frame = 0 

Query: 68  TVNLWFCFRFELHRRNQEVSCRVFEKEEFDVPRGNRSSLQTGELDKTVEIELPVPDTLPT 127
           TVN WF            V   +   E    PRGNR SLQTG+LDKTVEIELP+PDTLPT
Sbjct: 12  TVNFWF------------VLFSLSYPEGTKRPRGNRPSLQTGKLDKTVEIELPMPDTLPT 71

Query: 128 SAESFRSSSSTWLELYIES------------VMSGLHHVYV----ERSLD-------LVA 174
            AESF S+SSTWLELY ES            VMSGLH VYV    + SL+         +
Sbjct: 72  FAESFGSNSSTWLELYFESVHVERLCYFTNQVMSGLHLVYVGKGQQGSLEETMSVGFTPS 128

[Close]
BLAST of Spg015517 vs. NCBI nr
Match: TYJ96965.1 (uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-14
Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 99  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESFRSSSSTWLELYIES------------ 158
           PRGNR S QTG+LDKTVEIELPVPDTLPTSAES  S+SSTWLELY ES            
Sbjct: 137 PRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCYLTNQ 196

Query: 159 VMSGLHHVYV----ERSLD-------LVAFGLRQRLQR 174
           VMSGLH +YV    + SL+         +FGLRQ++ R
Sbjct: 197 VMSGLHPMYVGKGQQGSLEETMSVGFTPSFGLRQQVVR 234

[Close]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match: A0A5A7UGD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00750 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-29
Identity = 95/192 (49.48%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 4   TKPTTDNHIFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKSSCKASHCR 63
           TKPTTD  IFQ NFI FLHHF  KLSE+F+ERVK EEEEEFRGLRLKK+ K   ++   +
Sbjct: 145 TKPTTDKLIFQSNFILFLHHFSSKLSEYFKERVK-EEEEEFRGLRLKKM-KKFMQSQTLQ 204

Query: 64  IWVQTVNLWFCFRFELHRRNQEVSCRVFEKEEFDVPRGNRSSLQTGELDKT--------- 123
               T+NLWF            V   +   E    PRGNR SLQTG+LDKT         
Sbjct: 205 NLGATINLWF------------VLIGLSYPEGTMRPRGNRPSLQTGKLDKTVIFQLSTLS 264

Query: 124 -------------------VEIELPVPDTLPTSAESFRSSSSTWLELYIES--------- 156
                              VEIELP+PDTLPT AESF S+SSTWLELY ES         
Sbjct: 265 VLRDNDAVLILFKMFPTFQVEIELPMPDTLPTFAESFESNSSTWLELYFESVHVEMFCYL 322

[Close]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-25
Identity = 93/225 (41.33%), Postives = 108/225 (48.00%), Query Frame = 0 

Query: 12  IFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKSSCKASHCRIWVQTVNL 71
           +FQPNFISFLHHFP KLSEHFEERVK EEEEEFRGLRLKKIGKSSCKA+HCRIW    + 
Sbjct: 56  LFQPNFISFLHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRIWSTGFSS 115

Query: 72  ----WFCFR-----FELHRRNQEV--SCRVFEKEEFDV-PRGNRSSLQTGELDK------ 131
               +  F       E+ + NQ++       +  ++DV PRGNRSSLQTG+LDK      
Sbjct: 116 KPRGFLVFSDALSILEVQKSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISID 175

Query: 132 ------------------------------------------------------------ 146
                                                                       
Sbjct: 176 YMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVN 235

[Close]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match: A0A5D3BZ50 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00270 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-21
Identity = 86/206 (41.75%), Postives = 116/206 (56.31%), Query Frame = 0 

Query: 4   TKPTTDNHIFQPNFISFLHHFPFKLSEHFEERVKEEEEEEFRGLRLKKIGKS---SCKAS 63
           TKPTT   IFQ NFISFLHHFP KL EHFEERVK EEEEEFR ++ +   +S   S K  
Sbjct: 15  TKPTTYKLIFQRNFISFLHHFPSKLLEHFEERVK-EEEEEFRAIQKELRDESTGFSSKPG 74

Query: 64  HCRIWVQTVNLWFCFRFELHRRNQEVSCRV--FEKEEFDV-PRGNRSSLQTGELDKT--- 123
              ++   +++      E+H+ NQ++   +   +  ++DV PRGNRSSLQTGELDKT   
Sbjct: 75  GFLVFSDALSIQ-----EVHKSNQKLYLDIESGKSGKWDVMPRGNRSSLQTGELDKTVIF 134

Query: 124 --------------VEIELPVPDTLPTSAESFRSSSSTWLELYIESVMSGLHHVYVERSL 183
                         VEIELPVPD LPTSA+S  S+S     +    ++ G    ++  S 
Sbjct: 135 LLSTLSVLRDNDAVVEIELPVPDRLPTSAQSSGSNS-----IGSTGIVRGDDVYWLTPS- 194

Query: 184 DLVAFGLRQRLQRRDAVTIASQRSRF 187
               FGLRQ++ R   +  +  +S +
Sbjct: 195 ----FGLRQQMVREGNIGDSVNQSEY 204

[Close]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match: A0A5A7TAS6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00450 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-15
Identity = 64/129 (49.61%), Postives = 74/129 (57.36%), Query Frame = 0 

Query: 68  TVNLWFCFRFELHRRNQEVSCRVFEKEEFDVPRGNRSSLQTGELDKTVEIELPVPDTLPT 127
           TVN WF            V   +   E    PRGNR SLQTG+LDKTVEIELP+PDTLPT
Sbjct: 12  TVNFWF------------VLFSLSYPEGTKRPRGNRPSLQTGKLDKTVEIELPMPDTLPT 71

Query: 128 SAESFRSSSSTWLELYIES------------VMSGLHHVYV----ERSLD-------LVA 174
            AESF S+SSTWLELY ES            VMSGLH VYV    + SL+         +
Sbjct: 72  FAESFGSNSSTWLELYFESVHVERLCYFTNQVMSGLHLVYVGKGQQGSLEETMSVGFTPS 128

[Close]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match: A0A5D3BET3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00070 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-15
Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 99  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESFRSSSSTWLELYIES------------ 158
           PRGNR S QTG+LDKTVEIELPVPDTLPTSAES  S+SSTWLELY ES            
Sbjct: 137 PRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCYLTNQ 196

Query: 159 VMSGLHHVYV----ERSLD-------LVAFGLRQRLQR 174
           VMSGLH +YV    + SL+         +FGLRQ++ R
Sbjct: 197 VMSGLHPMYVGKGQQGSLEETMSVGFTPSFGLRQQVVR 234

The following BLAST results are available for this feature:
BLAST of Spg015517 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053276.11.9e-2849.48uncharacterized protein E6C27_scaffold102G00750 [Cucumis melo var. makuwa][more]
TYK08801.17.6e-2541.33hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
TYK04298.11.9e-2041.75pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
KAA0040420.13.2e-1549.61NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYJ96965.11.2e-1458.16uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa][more]
BLAST of Spg015517 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015517 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UGD09.3e-2949.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CAC63.7e-2541.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BZ509.4e-2141.75Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7TAS61.5e-1549.61NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BET35.9e-1558.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg015517 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015517.1Spg015517.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding