Spg015368 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015368
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold10: 11358006 .. 11368707 (+)
RNA-Seq ExpressionSpg015368
SyntenySpg015368
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAATAGGTCGAGTCTATAGACTAGGGAACTAGCTAAGACAGTGAGTGACAAAACAAATTTCGAAAATTGTTTCTAAACGGTTGTTCATGATTAGATGTCTTATATGCTTTTTCTTATGAATGATTCATGATTTCTATGAACGGTTTCAAGCATAAGTTTTGCGCTTATATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATGAAAAGTAGTTGAAACGATATTATTTAAAGTAAAGTATGTATTAGTGAGTACTGTTTAAAGATTTTCGGTTTTTCCACGAGCAAGCTTAGTAAGCTTAAGTTTTGCGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTCCTATTGACTACATGACTGAGATATTAAGCCCGAGGCTATATGGTACCGTGTGCACACGGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAATGATGTTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATTATAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATGTTAGTTAAGATGTTTTATATAATTGATATGTCTTGCTAGATTTTAATGACGTACTTGCGGGATATTTGAGAAAACTTTTATTATTTCACGTTTATGTTTAATGCTTTGATTGATTAGATTTATACGTTTAAAGGTTTATCACGTGTTCTAATTTGCAAATCTACAGTTTTAAATGTAGTCACTCACTGGGCGTCGTAGCTCATTCTTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGAGTTGAGTTGTATATTAAGTCTGTCTATATTGTAAATGTTTTGTAAAGATTGGATAATTTAGGTTCTAGAGGTCGTGGTTGTATAAACCCCAGTTGAATATGTTTTGGGTTGTGATATCTATATCAGGTTATTTTCCAAATCGAGTTATGTCAGGGCTGCACCTCGTGTATGTTAAAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTTCATGTGGAATATTTTATATCTAAGATTAGTATGTTTATCAGGTTCAACGTTACAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGTCATCTTCCAAACTGAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAATGAGACATGGTAGTTAGTGCTAAGAAGAATCTAGGAAGTAAATAGTTAGACGTTGAGTCAGTTCATATAGAACTAGCAGAGTACGGTCCAAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAGAATGTGGTTAGAAGTTTAGTATCATGCATCTGAGTTAAGTATCTATAGCATGTATGATGTGTTAATATGTTATAGGAGTCATGCCACCACGTACTAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGAGGTCAGAATGAGGCGGGGAGTGAGCGGTTTGCTAGATCTACACAGGAGGGCAGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATGTATGGGATAGAACGGCTGAAGAAGTTAGGAGCCACGGTGTTTGAGGGTTCCACAGATCCACCTGACGCCGAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGGAAAGTCAAATTAGCTACATTCCTTTTGCAGAAGGAGGTGGAGGGATGGTGGAAATTCATTTTAGCCAGGCGCAGTGATGCACGTATGTTAGACTGGCAGAGTTTCAGAGGCATATTAGAGGAAAAGTACTATCCCACCACATATTGTGAGGCTAAGAGAGATGAGTTTCTGGGGCTGAAGCAAGGGTCACTTTTAGTGGCCGAGTACGAGAGAACGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGGTATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGTTGCGTTTTGAGATACATACCCCGGTTACCGCTATTGCCAAGTGGACGGGTTTTTCCCAGCTGGTAGAGACTGCCTTACGTGTGGAGCAGAGTATCATAGAGGAAAAGTCGGCATTGGAGCCTAGTCGTGGAGCTCCAATAGCTAGTGGTTTTCGAGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATATTTCAGGCTGTCAAGACTTCAAGCGTCGATCTGGTTGCCAGTCATCGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGCCCCCAGTCAGTGTGCGAGTTCAGTAGCAAGACCGCGGACGGGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGCAAGTTGTGGCAAGAATCATCAGGGTAAGTGTCTTATTGGCGCCGGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGTCCACAGTTGAGGGCAGCAGTTCAGAGGGATCAGGGAGTTGAGTCCCACATAGTTGAGCAGCCGAGAGTCTCAGCAGCCGCAGGAGAGGGCACCAGTGGTGCAAGACAGAAGGGAGTTGTGGGGAGACCTAGGCAGTAGGGAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGATGTGATTACTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTGGTATGTTTTTAACTAAGGTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATACACTCCAGTTGGTGACGTTTTATTAGTCAATGAAGTATTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGAACTTCTTATTCACTCACTATGCTTCTATGGATTGCCATAGGAAGGAAGTGACTTTTAGGAAACCAGGTTTGACTGAGTGGTTTTCAGGGGTGAGAGGAAGATTATTCCTACAAGTTTGATTTCAGCTCTGAAAGCTGAAAAGTTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACATGTAGTAGAGGTGCAAGAAGAAAAGCTGAAACCAGGAGATGTTCCTGTAGTGAACGAATTTCTTGATGTTTTTCTAGCTGATCTATCGGGATTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACAGCACCTATTTCGCAGGCACCGTACAGAATGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCTCCAGTGTTATTTGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACGTAACAAGTATCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAAGGGAGCAACAGTGTTCTCTAAGATTGATTTGAGGTCAGGATATCACCAGTTAAAGGTTAGGGAATCAGATATTCCTAAGACAGCATTCGAGACGAGGTATGGGCACTATGAGTTTTTAGTGATGCCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGATGACATACTAGTTTACTCAATTGACAGGAAAGCCCATGAGGAACATCTAAGGATTGTTCTACAGATACTACGTGATAAACAATTGTATGCTAAGTTTAGCAAATGTGAGTTCTGGTTGAAACAAGTAGTGTTCTTAGGGCATGTAGTTTCAGCGGACGGAGTTAGTGTTGATCCGCAGAAAGTGGAAGTTGTTGTCAACTAGGAGAGACCAACTAGTGCAACAGAGGTGCGTAGTTTCCTCGGCCTGGCCGGATACTACAGACGTTTTGTTGAGGATTTCTCTTGATTAGCATTACAATTGACAGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAGAGTTTCTAGGAGCTAAAGAAGAGATTAGTGACAGGACCTATTCTGACACTTACTGTAACAGGGAAGGAGTATGTGATCTATTGTGACGCTTCGAGGCAAGGATTAGGTTGTGTGCTTATGTAGGAAGGAAAGGTAATAGCTTATGCTTCAAGGCAGTTGAAGAAGCATGAATGTAATTACCCTACCCATGATCTTAAGCTAGCAGCGGTTGTTCTAGCACTGAAGATCTGGAGACATTATTTATTCGGTGAGAAGTGCCACATTTTCACAGATCATAAGAGTTTGAAGTACATATTTGATCAGAAAGAGCGGAATCTGAGGCAGAGGCGATGGCTAGAACTAATCAAAGACTATGACTGTACCATAGAATATCATCCAGGTAAGGCTAACGTGGTAGCAGATGCGTTAAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTATGTGAGTTAAGAGGTTTCAAGGCGGTTGTGACTGCAGAAAGCTCAGGGAGTCTTTTAGCTCAATTTTAGGTTAGGTCTTTTCTAGTAGCAGAGATTGTGAGAAGACAGCCAGAGGATAGTAACTTACAGAAAATGCTTGCAAAGTCTAAGCAAGGCCCAAAGGCAGAATTTGAGTTGAGAGCAGACAGAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCGAGTATTGGTGAGCTTAAGGGGGCTATACTAGAGGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTACAGAACTCTGTAGAAAACTTATTGGTGGCCTGGTATGAAGCGGGAGATAGCTGAATATGTCGATAGATGTTTGATCTGCCAACAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCGGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCTCATACTTCTAATGGACATGATGGTATATGGGTAATAGTGGACAGACTCACCAAGACAGCACGGTTTATACCGATTAAAGCGACGCCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAGGATCGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAACGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCTTCAGTTTAAAGGAAGTTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTACCAGTCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGGCAGACCATGCAGAACCCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCATGAGTTGATACAAGTTACGTCAGACAGTATCAAGCTGATTAGAGAGAACCTGAAATTAGCTCAGGATCGACAGAAGAGCTATGCCGATAAGCGACGAAGAGACTTAGAATTCTAGGTTGGAGATCAAGTTTTCCTAAAGTTATCCCCATGGAGAGGTGTTCTTCGCTTTGGGAGGAAAGGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATAATAGAACGAGTTGGACCAGTAGCCTATAGACTTGAGTTGCCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATATTGAGGAAATATATTCCAGATCCATCCCATGTGTTACAAGTGCAACCGATTGAGCTGAAAGAAGACTTGAGTTATAAAGAGGAAGCGGTTCAAATCCTCGATAGAAAGGAACAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCATGGAGTAGAGGAGGCAACCTGGGAGTCAGAAGATCAGATGAGGAGGAGTTACCCGACACTCTTCACCTAGGGACTTCTAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCCGAGACTTCCCTAGGGTTATTTTCTCTTGTCATATATTCTAGGAAGTTGGATTTGAGTTATTGTGGTCTCATTGGTTGGATTAAAGTTGTTGTTTCCTTGTTGGAAAATGGCAAACTTTGTGGTTTTATTGTTGGTTGAAGTTGTTGGAACTTACCAATTTAAAAGAAGAAGTGGAACAAAGAAGAAAACGAAAAGAAAAGAAAGGGAAAAAGAAAATGAAATAGGGAAATGAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAGGAAGTGGGAAAAGACAGCGAAGATTCCACCACCGACAAGCTCACTTTTCAGCCCACTTCCAGCCACATTTCTCCATCTTTTCCATCCAAACTCCAGAGCTTTCGAGGGAGGGAGTGAAGGAAGAAGAAGAAGGAGATTTACAGGGTTTTGAGGTTGAAGAAGATAGGAAATAGCTCAAGCAAAGGCAGCCATAGCAGAATCTGAGTTCAACATGTCTACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTCCATTTTCTAACAAATTTCATGAAGGAAGCTTGAGCTAAATCTGATGAGAAGTTAATGGGTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAACAAGGAGGATCTCTAGTTTTCTCTGGTTTTTCGCGCATTCTGGGGTTTACAAGTTAAATCAGAAGCTCTATTTGGTATGGTTGGAAGGCTTACTCAATTTCCTACAACTTTCATGAAGAATTCGTGACCCAAAAAGGACTTGAAGTAGGTTTAATTTCAGGAGATAGATAAAGGGTAGCAGAGAAGCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGGTCAGAATCGCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGCAAATGAAGAGTTTGATGTATAGTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGGCTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAAGTGTGATTTTTAATTCAAGTGTTTAGAATTCATGAGCATGGAAGAATAAGACTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTATAGACTAGGGAACTAGCTAAGACAGTGAGTGACAAAACAAATTTCGAAAATTGTTTCTAAACGGTTGTTCATGATTAGATGTCTTATATGCTTTTTCTTATGAATGATTCATGATTTCTATGAACGGTTTCAAGCATAAGTTTTGCGCTTATATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATGAAAAGTAGTTGAAACGATATTATTTAAAGTAAAGTATGTATTAGTGAGTACTGTTTAAAGATTTTCGGTTTTTCCACGAGCAAGCTGAGTAAGCTTAAGTTTTGCGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTCCTATTGACTACATGACTGAGATATTAAGCCCGAGGCTATATGGTACCGTGTGCACACGGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAATGATGTTGTCGTGAATGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGACAGGCCCCACTACATTATAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATGTTAGTTAAGATGTTTTATATAATTGATATGTCTTGCTAGATTTTAATGACGTACTTGCGGGATATTTGAGAAAACTTTTATTATTTCACGTTTATGTTTAATGCTTTGATTGATTAGATTTATACGTTTAAAGGTTTATCACGTGTTCTAATTTGCAAATCTACAGTTTTAAATGTAGTCACTCACTGGGCGTCGTAGCTCATTCTTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGAGTTGAGTTGTATATTAAGTCTGTCTATATTGTAAATGTTTTGTAAAGATTGGATAATTTAGGTTCTAGAGGTCGTGGTTGTATAAACCCCAGTTGAATATGTTTTGGGTTGTGATATCTATATCAGGTTATTTTCCAAATCGAGTTATGTCAGGGCTGCACCTCGTGTATGTTAAAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTTCATGTGGAATATTTTATATCTAAGATTAGTATGTTTATCAGGTTCAACGTTACAAGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGTCATCTTCCGGACTGAGCTAGCAGGTGGTCCGGGAGGGTGTGTGACAATTTCTTTTTGAGGCCATGTAAAACTGTTAGCTTGACTTTTATTTTTTGACGTTAATTTGTTCTTTTAAAGTTTTCGGATCCCGTATACAAGTTTTTATTTTGAGGTTTTATTGAGATTATGAGTTTATGCTTTTAAAGTGTTTTATTAAAAAAGCCTCCATAGCATGCATGTGGTAACGGTCCCAAATAGGTCCATATTAGAAGTCAGGTCGTTACAGTTGGTATCAGAGCCCGATTAAGGGTTCTATAGACTACTTACATCGTAAGCTTAAATGTTCCCATGGCTAAATAATGAGGTTCTCATCATCGGAAGGTATGCCCTTGTGATAGACTATGTTTTAATTATATGTTTATGTAATTATTTTCCATGAGATGCATTATTACTCTTCCCTTTTTAGTTTTTGGTTTGATATTTGATAGCACTGGTACTTAAGGAGACAAAGGTAACACAGGGGTAAAACGGTAATTTGACCCAGCTGTAGTTACGAACACTCGTGAAGGATTGACTTACCGTTATTGGCCTATATCCATGGACACAAAAATGTTCTACAATGAGAAGAGTGCAACTGTGGGTCTTTAGTGGAGTGACCCGCAGTTAATGAACATTGGTTAACTCGACTAATGAGTTTAGTCAGTTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTAAGTCCCCTTGCTAGCTCGTAAAGGGTAATTACGAAAAATTAGTCTTGAAAGGAATTTGAATAGTTCAAAATCCATTATGGGAAATCAAGTTAATTGTATGAGATACAACTAATATAATGTATGCGATACGTTAAAATATAAAGTTTAATTTAAGATTAAACTTTATTAATTGAGAGAAATACAACTAAATACAATTTAATTGTAGGCTTAAATTAAATATGAGATATTTAATTTAGTAATTAATTAATTGGAGAATTAATTAATTATTATTTAATTTAATTGAATTTGATTTCATTAAAAGCTATAGGTTATGTGGGGCATATTCATTTAAATATGATTTAAATGAAATTAATTAAATTCAATTTAATTATTGATTTAATTAATTAATTAATATTAATTAATTAAATGAATCCCCATCCTATTAGAATTGGGAAGAGTAATTAATTATTAATTATATCCCTAACCTATTATGAATAGGAAAGGGATATGACACTCTATATAAAGAACATAATGCCTTCCCAATTGAGACAACTCTCTCAACTCAAGACTTTGCTCTCAAGCAAAAATTTCTCTCTAAGAATTTCACAACATTCTAGTGAAATTCTTTTTCCCAAAATTCAAGAACACCAAGTCCCACAACTTGGTTCCTAGTCCCAGAGATATAGCAGTGGAAGATCTCGGTGGTAGTGTCCCTACTGTGATCATATTATTCTTGGTGGGAGTTTATTGAAGAAAGTCTTCAACAAGTAAGTATTTTATTCTTGTAATTATTAGATTTAGATCTAATGCATGCTTAGCTTAATTTATATATAGAATCATTCTGTATGATTTACCAATGTATTGGTATTTTAGAAAACTTAATTAAAATACGAATCGGTCCAATTCGCTTCCGCTAACAGAATTAGGGAATTCCAATCCTTCACACGAAATGTCGAGGAGGTGAAAAGACGAAAGTGGAGCACTCAAGACTCGAAAATAACGTCAAAATGATAAAAAATTGAAGCAGCCAAACGAGGTAGACCCGAGAGGTAGTGTCAAGACGCTACCTCACGACGTCTCGACGCTACGAATTTGATAGACTGCGTAAATCACCGTCAGCGTTGAGACGCTGGCCACGGCGTCTCGACATTGAGACGATTATATAACTATTGTTTTTGCATTTTAGGTCACAGATTGGACGAGGGAAGCAGCCGTTTTTCTCAATTTCTTCTCTGTTTTCTCTCGTTCTTCTCTGTTTTTCTTAGTTTTAGGTTAGTTTAGGTTGTTTTCTCAAGCCTGGCTTAGATCAGGCTTGTCTATGGCCGTCTAAGCGCCGTTCGGTGTACTTGGAACCTCGATATTGTAAGTACATTTCAGTTTTTATGAGATTCTTTGAGTTTTCTGTACTGAATGCATATTCTGAAGGGATTGGAATTTCTCAATTCCGTAAAGCGGAAGCGTAG

mRNA sequence

ATGGGAGTGCTGGGCGGGCCCCACTACATTATAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATATTTATACGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTACAGGAGGGTCAACGGGAGTCATGCCACCACGTACTAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTACAAGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGTCATCTTCCGGACTGAGCTAGCAGGTGGTCCGGGAGGGTATGCCCTTGTGATAGACTATGTTAGTTTAGGTTGTTTTCTCAAGCCTGGCTTAGATCAGGCTTGTCTATGGCCGTCTAAGCGCCGTTCGGTGTACTTGGAACCTCGATATTGTAAGTACATTTCAGTTTTTATGAGATTCTTTGAGTTTTCTGTACTGAATGCATATTCTGAAGGGATTGGAATTTCTCAATTCCGTAAAGCGGAAGCGTAG

Coding sequence (CDS)

ATGGGAGTGCTGGGCGGGCCCCACTACATTATAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATATTTATACGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTACAGGAGGGTCAACGGGAGTCATGCCACCACGTACTAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTACAAGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGTCATCTTCCGGACTGAGCTAGCAGGTGGTCCGGGAGGGTATGCCCTTGTGATAGACTATGTTAGTTTAGGTTGTTTTCTCAAGCCTGGCTTAGATCAGGCTTGTCTATGGCCGTCTAAGCGCCGTTCGGTGTACTTGGAACCTCGATATTGTAAGTACATTTCAGTTTTTATGAGATTCTTTGAGTTTTCTGTACTGAATGCATATTCTGAAGGGATTGGAATTTCTCAATTCCGTAAAGCGGAAGCGTAG

Protein sequence

MGVLGGPHYIIELVNVGCTGRALHNVDLSYLYVEIELPVPDTLPTSAESSRTSSSSTLQEGQRESCHHVLADDAGRIRTGRRILPRVNLKGDPVPREVEIELPVPDTLPTSAESSRTSSSSTLQEGQRVSLEEDDVRWLHVIFRTELAGGPGGYALVIDYVSLGCFLKPGLDQACLWPSKRRSVYLEPRYCKYISVFMRFFEFSVLNAYSEGIGISQFRKAEA
Homology
[Close]
BLAST of Spg015368 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 3.6e-16
Identity = 67/167 (40.12%), Postives = 82/167 (49.10%), Query Frame = 0 

Query: 2   GVLGGPHYIIELVNVGCTGRALHNVDLSYLYVEIELPVPDTLPTSAESSRTSSSSTLQEG 61
           GV GGPHYI+ LVNVGCTGR LH++D S   +EIEL VPDTLPTSAESS ++SS+ L+  
Sbjct: 221 GVPGGPHYIVGLVNVGCTGRVLHHIDRS---LEIELLVPDTLPTSAESSGSNSSTWLE-- 280

Query: 62  QRESCHHVLADDAGRIRTGRRILPRVNLKGDPVPREVEIELPVPDTLPTSAESSRTSSSS 121
                   L      +RT  RI   V   G                              
Sbjct: 281 ----FDFELFYKPSDVRTASRICWEVRSAG------------------------------ 339

Query: 122 TLQEGQRVSLEEDDVRWLHVIFRTELAGGPGGYALVIDYVSLGCFLK 169
                    + E+DV WLH +FR ++AGG GG   V+ Y SL C LK
Sbjct: 341 --------IVRENDVCWLHAVFRAKIAGGSGGGVTVVSYGSL-CSLK 339

[Close]
BLAST of Spg015368 vs. NCBI nr
Match: TYK11281.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-11
Identity = 44/86 (51.16%), Postives = 50/86 (58.14%), Query Frame = 0 

Query: 1  MGVLGGPHYIIELVNVGCTGRALHNVDLSYLYVEIELPVPDTLPTSAESSRTSSSSTLQE 60
          M VL G HYI+EL NVGC GRALHNVDLS + +                  T   S  + 
Sbjct: 5  MEVLDGSHYIVELANVGCIGRALHNVDLSCVSIRF----------------TCEISYFRA 64

Query: 61 GQRESCHHVLADDAGRIRTGRRILPR 87
             ESCHHVLADD GRIRTG ++LPR
Sbjct: 65 TLHESCHHVLADDVGRIRTGCKVLPR 74

[Close]
BLAST of Spg015368 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-11
Identity = 57/135 (42.22%), Postives = 62/135 (45.93%), Query Frame = 0 

Query: 33  VEIELPVPDTLPTSAESSRTSSSSTLQ--------------------------------- 92
           VEIELPVPDTLPTSAESS ++SS+ L+                                 
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 93  --------------------------EGQRESCHHVLADDAGRIRTGRRILPRVNLKGDP 109
                                         ESCHHV ADDAGRIRTGRRILP+VNLKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg015368 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-11
Identity = 57/135 (42.22%), Postives = 62/135 (45.93%), Query Frame = 0 

Query: 33  VEIELPVPDTLPTSAESSRTSSSSTLQ--------------------------------- 92
           VEIELPVPDTLPTSAESS ++SS+ L+                                 
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 93  --------------------------EGQRESCHHVLADDAGRIRTGRRILPRVNLKGDP 109
                                         ESCHHV ADDAGRIRTGRRILP+VNLKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg015368 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-07
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 98  VEIELPVPDTLPTSAESSRTSSSSTLQ---EGQRVSL-------EEDDVRWLHVIFRTEL 154
           VEIELPVPDTLPTSAESS ++SS+ L+   E   V +        EDDV WLH +FR + 
Sbjct: 34  VEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKT 93

[Close]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 67/167 (40.12%), Postives = 82/167 (49.10%), Query Frame = 0 

Query: 2   GVLGGPHYIIELVNVGCTGRALHNVDLSYLYVEIELPVPDTLPTSAESSRTSSSSTLQEG 61
           GV GGPHYI+ LVNVGCTGR LH++D S   +EIEL VPDTLPTSAESS ++SS+ L+  
Sbjct: 221 GVPGGPHYIVGLVNVGCTGRVLHHIDRS---LEIELLVPDTLPTSAESSGSNSSTWLE-- 280

Query: 62  QRESCHHVLADDAGRIRTGRRILPRVNLKGDPVPREVEIELPVPDTLPTSAESSRTSSSS 121
                   L      +RT  RI   V   G                              
Sbjct: 281 ----FDFELFYKPSDVRTASRICWEVRSAG------------------------------ 339

Query: 122 TLQEGQRVSLEEDDVRWLHVIFRTELAGGPGGYALVIDYVSLGCFLK 169
                    + E+DV WLH +FR ++AGG GG   V+ Y SL C LK
Sbjct: 341 --------IVRENDVCWLHAVFRAKIAGGSGGGVTVVSYGSL-CSLK 339

[Close]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match: A0A5D3CHK1 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001400 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-12
Identity = 44/86 (51.16%), Postives = 50/86 (58.14%), Query Frame = 0 

Query: 1  MGVLGGPHYIIELVNVGCTGRALHNVDLSYLYVEIELPVPDTLPTSAESSRTSSSSTLQE 60
          M VL G HYI+EL NVGC GRALHNVDLS + +                  T   S  + 
Sbjct: 5  MEVLDGSHYIVELANVGCIGRALHNVDLSCVSIRF----------------TCEISYFRA 64

Query: 61 GQRESCHHVLADDAGRIRTGRRILPR 87
             ESCHHVLADD GRIRTG ++LPR
Sbjct: 65 TLHESCHHVLADDVGRIRTGCKVLPR 74

[Close]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-11
Identity = 57/135 (42.22%), Postives = 62/135 (45.93%), Query Frame = 0 

Query: 33  VEIELPVPDTLPTSAESSRTSSSSTLQ--------------------------------- 92
           VEIELPVPDTLPTSAESS ++SS+ L+                                 
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 93  --------------------------EGQRESCHHVLADDAGRIRTGRRILPRVNLKGDP 109
                                         ESCHHV ADDAGRIRTGRRILP+VNLKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-11
Identity = 57/135 (42.22%), Postives = 62/135 (45.93%), Query Frame = 0 

Query: 33  VEIELPVPDTLPTSAESSRTSSSSTLQ--------------------------------- 92
           VEIELPVPDTLPTSAESS ++SS+ L+                                 
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 93  --------------------------EGQRESCHHVLADDAGRIRTGRRILPRVNLKGDP 109
                                         ESCHHV ADDAGRIRTGRRILP+VNLKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 98  VEIELPVPDTLPTSAESSRTSSSSTLQ---EGQRVSL-------EEDDVRWLHVIFRTEL 154
           VEIELPVPDTLPTSAESS ++SS+ L+   E   V +        EDDV WLH +FR + 
Sbjct: 34  VEIELPVPDTLPTSAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKT 93

The following BLAST results are available for this feature:
BLAST of Spg015368 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK08801.13.6e-1640.12hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
TYK11281.11.2e-1151.16putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0062409.13.5e-1142.22reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.13.5e-1142.22putative Retrotransposon protein [Cucumis melo var. makuwa][more]
TYK27998.12.3e-0757.58reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of Spg015368 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015368 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CAC61.7e-1640.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CHK15.8e-1251.16Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... [more]
A0A5A7V9N31.7e-1142.22Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY71.7e-1142.22Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3DX391.1e-0757.58Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
BLAST of Spg015368 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015368.1Spg015368.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0016740 transferase activity