Spg015085 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015085
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Acanthoscurrin-1-like
Location	scaffold3: 40717432 .. 40717821 (+)
RNA-Seq Expression	Spg015085
Synteny	Spg015085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATTGTTTATGGCTTTGCTCTTGGCTCTTGTGGCCACTCACGCCTTAGCTAGGCCTACGCCCAAGGACGCGGCCACCTTCAATGACCAAAAGAACTTCCTAACTTACGGCGGTGTCGGTGGCTACTCCGGCATTGGCAACAACGGCCTCCCGTTCGGTGGGATCGGCGGTGCAGTTGGAGGAGGTGGCCTCGGTGGCGGTCTTGGTGGTGGTCTCGGTGGTCTCGGTGGGTTCGGAGGCACTGGAGGTGGCATTGGTGGAACTCTTGGAGGTGCAACAACTGGTGGTGGTCTCGGCGGTGGTCTTGGTGGTGGGCTCGGAGGCGGTCTCGGTGGCGGTCTTGGTGGTGGCGTTGGTGGTGGGTCTGGTCTTCCTTATCCTTGA

mRNA sequence

ATGGCAAAATTGTTTATGGCTTTGCTCTTGGCTCTTGTGGCCACTCACGCCTTAGCTAGGCCTACGCCCAAGGACGCGGCCACCTTCAATGACCAAAAGAACTTCCTAACTTACGGCGGTGTCGGTGGCTACTCCGGCATTGGCAACAACGGCCTCCCGTTCGGTGGGATCGGCGGTGCAGTTGGAGGAGGTGGCCTCGGTGGCGGTCTTGGTGGTGGTCTCGGTGGTCTCGGTGGGTTCGGAGGCACTGGAGGTGGCATTGGTGGAACTCTTGGAGGTGCAACAACTGGTGGTGGTCTCGGCGGTGGTCTTGGTGGTGGGCTCGGAGGCGGTCTCGGTGGCGGTCTTGGTGGTGGCGTTGGTGGTGGGTCTGGTCTTCCTTATCCTTGA

Coding sequence (CDS)

ATGGCAAAATTGTTTATGGCTTTGCTCTTGGCTCTTGTGGCCACTCACGCCTTAGCTAGGCCTACGCCCAAGGACGCGGCCACCTTCAATGACCAAAAGAACTTCCTAACTTACGGCGGTGTCGGTGGCTACTCCGGCATTGGCAACAACGGCCTCCCGTTCGGTGGGATCGGCGGTGCAGTTGGAGGAGGTGGCCTCGGTGGCGGTCTTGGTGGTGGTCTCGGTGGTCTCGGTGGGTTCGGAGGCACTGGAGGTGGCATTGGTGGAACTCTTGGAGGTGCAACAACTGGTGGTGGTCTCGGCGGTGGTCTTGGTGGTGGGCTCGGAGGCGGTCTCGGTGGCGGTCTTGGTGGTGGCGTTGGTGGTGGGTCTGGTCTTCCTTATCCTTGA

Protein sequence

MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGAVGGGGLGGGLGGGLGGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLGGGLGGGVGGGSGLPYP

Homology

[Close]

BLAST of Spg015085 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-32
Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIG+NGLPFGG+GGA
Sbjct: 1   MAKLFMALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGA 60

Query: 61  VGGGGLGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLG 120
           +GGGGLGGGLGGGL       GGLGG GGTGGG+GG +GG T  GGLGGGLGGGLGGGLG
Sbjct: 61  IGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG-IGGTT--GGLGGGLGGGLGGGLG 120

Query: 121 GGLGGGVGGGSGLPYP 130
           GGLGGGVGG SG+ YP
Sbjct: 121 GGLGGGVGGASGVTYP 132

[Close]

BLAST of Spg015085 vs. NCBI nr
Match: XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 9.6e-30
Identity = 108/131 (82.44%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 6   MALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGAVGGGG 65
           MALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIG+NGLPFGG+GGA+GGGG
Sbjct: 1   MALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGG 60

Query: 66  LGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLGGGLGG 125
           LGGGLGGGL       GGLGG GGTGGG+GG +GG T  GGLGGGLGGGLGGGLGGGLGG
Sbjct: 61  LGGGLGGGLGGATGIGGGLGGLGGTGGGLGG-IGGTT--GGLGGGLGGGLGGGLGGGLGG 120

Query: 126 GVGGGSGLPYP 130
           GVGG SG+ YP
Sbjct: 121 GVGGASGVTYP 127

[Close]

BLAST of Spg015085 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 4.8e-29
Identity = 111/134 (82.84%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIGNNGLPFGG+GGA
Sbjct: 1   MAKLFMALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGA 60

Query: 61  VGGGGLGGGLGGGL-GGLGGFGGTGGGIGGTLGGATTG----GGLGGGLGGGLGGGLGGG 120
           +GGGGLGGGLGGGL GGLGG  G GGG+GG LGG   G    GG  GGLGGGLGGGLGGG
Sbjct: 61  IGGGGLGGGLGGGLGGGLGGGTGIGGGLGG-LGGPGGGFGGIGGTTGGLGGGLGGGLGGG 120

Query: 121 LGGGVGGGSGLPYP 130
           LGGGVGG SG+ YP
Sbjct: 121 LGGGVGGASGVTYP 132

[Close]

BLAST of Spg015085 vs. NCBI nr
Match: KAE8646236.1 (hypothetical protein Csa_016187 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 4.8e-29
Identity = 111/134 (82.84%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIGNNGLPFGG+GGA
Sbjct: 38  MAKLFMALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGA 97

Query: 61  VGGGGLGGGLGGGL-GGLGGFGGTGGGIGGTLGGATTG----GGLGGGLGGGLGGGLGGG 120
           +GGGGLGGGLGGGL GGLGG  G GGG+GG LGG   G    GG  GGLGGGLGGGLGGG
Sbjct: 98  IGGGGLGGGLGGGLGGGLGGGTGIGGGLGG-LGGPGGGFGGIGGTTGGLGGGLGGGLGGG 157

Query: 121 LGGGVGGGSGLPYP 130
           LGGGVGG SG+ YP
Sbjct: 158 LGGGVGGASGVTYP 169

[Close]

BLAST of Spg015085 vs. NCBI nr
Match: XP_022143624.1 (glycine-rich protein 23-like [Momordica charantia])

HSP 1 Score: 131.3 bits (329), Expect = 5.8e-27
Identity = 103/137 (75.18%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDA-ATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGG 60
           MAK+FM LLLALVATHA+ARPTP    ATF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGL 120
           AVGGGGLGGGLGGGL       GGLGG GGTGGG+GG +GG   GG +G   GGG  GGL
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGG--IGGTIG---GGGASGGL 120

Query: 121 GGGLGGGVGGGSGLPYP 130
           GGGLGGG+GGGS LPYP
Sbjct: 121 GGGLGGGLGGGSALPYP 132

[Close]

BLAST of Spg015085 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIG+NGLPFGG+GGA
Sbjct: 1   MAKLFMALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGA 60

Query: 61  VGGGGLGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLG 120
           +GGGGLGGGLGGGL       GGLGG GGTGGG+GG +GG T  GGLGGGLGGGLGGGLG
Sbjct: 61  IGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG-IGGTT--GGLGGGLGGGLGGGLG 120

Query: 121 GGLGGGVGGGSGLPYP 130
           GGLGGGVGG SG+ YP
Sbjct: 121 GGLGGGVGGASGVTYP 132

[Close]

BLAST of Spg015085 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.6e-30
Identity = 108/131 (82.44%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 6   MALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGAVGGGG 65
           MALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIG+NGLPFGG+GGA+GGGG
Sbjct: 1   MALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGG 60

Query: 66  LGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLGGGLGG 125
           LGGGLGGGL       GGLGG GGTGGG+GG +GG T  GGLGGGLGGGLGGGLGGGLGG
Sbjct: 61  LGGGLGGGLGGATGIGGGLGGLGGTGGGLGG-IGGTT--GGLGGGLGGGLGGGLGGGLGG 120

Query: 126 GVGGGSGLPYP 130
           GVGG SG+ YP
Sbjct: 121 GVGGASGVTYP 127

[Close]

BLAST of Spg015085 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29
Identity = 111/134 (82.84%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMALLLALVATHALARPTPKD  TF+DQKNFLTYGGVGGYSGIGNNGLPFGG+GGA
Sbjct: 1   MAKLFMALLLALVATHALARPTPKD-DTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGA 60

Query: 61  VGGGGLGGGLGGGL-GGLGGFGGTGGGIGGTLGGATTG----GGLGGGLGGGLGGGLGGG 120
           +GGGGLGGGLGGGL GGLGG  G GGG+GG LGG   G    GG  GGLGGGLGGGLGGG
Sbjct: 61  IGGGGLGGGLGGGLGGGLGGGTGIGGGLGG-LGGPGGGFGGIGGTTGGLGGGLGGGLGGG 120

Query: 121 LGGGVGGGSGLPYP 130
           LGGGVGG SG+ YP
Sbjct: 121 LGGGVGGASGVTYP 132

[Close]

BLAST of Spg015085 vs. ExPASy TrEMBL
Match: A0A6J1CPV7 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-27
Identity = 103/137 (75.18%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDA-ATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGG 60
           MAK+FM LLLALVATHA+ARPTP    ATF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGL-------GGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGL 120
           AVGGGGLGGGLGGGL       GGLGG GGTGGG+GG +GG   GG +G   GGG  GGL
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGG--IGGTIG---GGGASGGL 120

Query: 121 GGGLGGGVGGGSGLPYP 130
           GGGLGGG+GGGS LPYP
Sbjct: 121 GGGLGGGLGGGSALPYP 132

[Close]

BLAST of Spg015085 vs. ExPASy TrEMBL
Match: A0A6J1H8T3 (acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.2e-27
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAKLFMA+LLAL+ATHALARPTPKD ATF DQKNFLTYGG+GGYSGIG+NGLPFGG+GGA
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKD-ATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGA 60

Query: 61  VGGGGLGGGLGGGLGGLGGFGG----------TGGGIGGTLGGATTGGGLGGGLGGGLGG 120
           VGG G  GG+GGG+GGLGGFGG           GGG+GGT+GG   GGGLGG +GGGLGG
Sbjct: 61  VGGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGG 120

Query: 121 GLGGGLGGGVGGGSGLP 128
           GLGGG+GG  GGGSGLP
Sbjct: 121 GLGGGVGG--GGGSGLP 133

[Close]

BLAST of Spg015085 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein )

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06
Identity = 66/127 (51.97%), Postives = 74/127 (58.27%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDAATFNDQKNFLTYGGVGGYSGIGNNGLPFGGIGGA 60
           MAK F  + L      ALA          +DQKN+L YG  GGYSG+G+NGLPFGG+GG 
Sbjct: 1   MAKWFFTIFLVFALASALACGARNVPVGLSDQKNYLGYG--GGYSGVGDNGLPFGGVGGG 60

Query: 61  VGGGGLGGGLGGGLGGLGGFGGTGGGIGGTLGGATTGGGLGGGLGGGLGGGLGGGLGGGV 120
           V G        GG  G GGFGG GGG+GG LGG   G GLGGGLGG  G G+G G  GG 
Sbjct: 61  VSG-------PGGNLGYGGFGGAGGGLGGGLGGG-AGSGLGGGLGG--GSGIGAGTSGGS 115

Query: 121 GGGSGLP 128
            GG   P
Sbjct: 121 TGGVHFP 115

The following BLAST results are available for this feature:

BLAST of Spg015085 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050560.1	2.7e-32	83.09	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]
XP_008462124.1	9.6e-30	82.44	PREDICTED: acanthoscurrin-1-like [Cucumis melo]	[more]
XP_011659762.1	4.8e-29	82.84	glycine-rich protein 5 [Cucumis sativus]	[more]
KAE8646236.1	4.8e-29	82.84	hypothetical protein Csa_016187 [Cucumis sativus]	[more]
XP_022143624.1	5.8e-27	75.18	glycine-rich protein 23-like [Momordica charantia]	[more]

BLAST of Spg015085 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5T7	1.3e-32	83.09	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A1S3CGR1	4.6e-30	82.44	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]
A0A0A0K9U1	2.3e-29	82.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1	[more]
A0A6J1CPV7	2.8e-27	75.18	glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4...	[more]
A0A6J1H8T3	8.2e-27	75.91	acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1	[more]

BLAST of Spg015085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29030.1	3.5e-06	51.97	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015085.1	Spg015085.1	mRNA