Spg014629 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014629
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L44
Location	scaffold3: 45883540 .. 45885078 (-)
RNA-Seq Expression	Spg014629
Synteny	Spg014629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATATTCATCGAGTATAAAAAAGGAGGAATTTTATGGGGTTTCATCTGTTCGCCGATTGGGTTTCTTCACAGAGGTTGTAAGGACCAGAAGCCGTCATGGTAATCTTGCTTTTATTGTTCTTTGCTGATTGTTTGGATTTTCACCTTCTTTTCATGATTCTATGATGTGTTTGGTGATGAGGATTTAACTGGAGCATGTTCTTCGTTCTATAATCTTATATTATTTGATTACGAACGCTGGAAGCTAAAGCCTCGTAAAATTATTTTTGATGTAAGCTAATTTTGTCGATTTTGTGGAATGTATTGTGTATAAATTGTAATCTGGGAAATTGGATTGATGAGTTTTGGAATTGTGTTGGTTGTCTCACCTGCGAGAGTTGTTTCTCAGTGTTCATTGGCATTTATGAAGGGCATTGTTCTGCTAGAAGGTCAATGTTGTGTTCTAATGAAGTGTGGTTCCTTGAGTTTTTAAAGTTATGTTTATTCTTAGGAAGTGTTAATGCTGTAGATCTGGTTTAGATATACTCGAATTGAAAACAAATTTGTAAGTCCGAGACTAAAGAGACAAGACATGCCGTTGCAAACATTTTTGGATTCTGTCAAGAATAAGTTTGCTCTGGTTTTCTTGATTCAAGCATTTTTGCGTATAGTTGCCAATTATGTTTTCCTCTTCAAGAATTTCTGCAAAATTTGGAGCTATTTTATATTTCTTGTAGAGTTATACTAATGTATGATCTTCAAATTCTCGTTTTTTTATTTGAATGATTTTAAATTCTTCTGCTAAATAGGTGAACGTTCCCAAGACAAAGAAGACTTACTGCAAGAGCAAGGAATGCAGAAAGCATACCTTGCACAAGGTTACCCAATACAAGAAGGGTAAGGACAGTCTTGCTGCTCAAGGAAAGCGTCGTTATGATCGTAAACAATCAGGATATGGAGGACAGACCAAGCCTGTCTTCCACAAGAAGGTAAAAAAAATTAATGAGAGCTTTAAATTTTGTTTATTTTCCTTAAAGAAGTAATCATAAGAGCTTTAAATTTCCTGACAGGCCAAAACTACAAAGAAGATTGTGCTAAGGTTGCAATGCCAGGGTTGCAAGCACGTGTCGCAGCATCCCATTAAGGTTTGTACTCCAAGCAAATTTCTCATTCATTGGTGTTTCTTTGCTGATATCAACTATGTTTGGATGGAACCCTTATAATAGTTATCCTTCAATTACTCTCACTAATGACTACCTTCTCATTTGTTATTGCAGAGATGCAAGCATTTTGAGATTGGTGGAGACAAGAAGGGAAAGGGAACTTCTCTTTTTTAGATGCATTAACAGTGTCATTCACTATATATTGCTTTTTAGGGAGTCAAAATTGTGGGTTTCTTCTGCCCTATGCTTTTTGTTTGGTTGTTCTGATATTTGTGAACACTTTTACAAGTTGAATTTTGTTTAATGTATCAGTTTATAATGGAACAACTAGCTAGCCTCTACCAATTTTCTTGTTGATCCATCGTTTAAATTTCACTGTTAGTTCTTCGTCT

mRNA sequence

ATGCCGTTGCAAACATTTTTGGATTCTGTCAAGAATAAGTTTGCTCTGGTGAACGTTCCCAAGACAAAGAAGACTTACTGCAAGAGCAAGGAATGCAGAAAGCATACCTTGCACAAGGTTACCCAATACAAGAAGGGTAAGGACAGTCTTGCTGCTCAAGGAAAGCGTCGTTATGATCGTAAACAATCAGGATATGGAGGACAGACCAAGCCTGTCTTCCACAAGAAGGCCAAAACTACAAAGAAGATTGTGCTAAGGTTGCAATGCCAGGGTTGCAAGCACGTGTCGCAGCATCCCATTAAGAGATGCAAGCATTTTGAGATTGGTGGAGACAAGAAGGGAAAGGGAACTTCTCTTTTTTAG

Coding sequence (CDS)

ATGCCGTTGCAAACATTTTTGGATTCTGTCAAGAATAAGTTTGCTCTGGTGAACGTTCCCAAGACAAAGAAGACTTACTGCAAGAGCAAGGAATGCAGAAAGCATACCTTGCACAAGGTTACCCAATACAAGAAGGGTAAGGACAGTCTTGCTGCTCAAGGAAAGCGTCGTTATGATCGTAAACAATCAGGATATGGAGGACAGACCAAGCCTGTCTTCCACAAGAAGGCCAAAACTACAAAGAAGATTGTGCTAAGGTTGCAATGCCAGGGTTGCAAGCACGTGTCGCAGCATCCCATTAAGAGATGCAAGCATTTTGAGATTGGTGGAGACAAGAAGGGAAAGGGAACTTCTCTTTTTTAG

Protein sequence

MPLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF

Homology

[Close]

BLAST of Spg014629 vs. NCBI nr
Match: MBA0842590.1 (hypothetical protein [Gossypium armourianum])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 106 PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 165

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 166 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 224

[Close]

BLAST of Spg014629 vs. NCBI nr
Match: MBA0750941.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 534 PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 593

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 594 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 652

[Close]

BLAST of Spg014629 vs. NCBI nr
Match: XP_012460311.1 (PREDICTED: 60S ribosomal protein L44-like [Gossypium raimondii] >KJB76839.1 hypothetical protein B456_012G133600 [Gossypium raimondii])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 54  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 113

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 114 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 172

[Close]

BLAST of Spg014629 vs. NCBI nr
Match: TYI87946.1 (hypothetical protein E1A91_D04G172500v1, partial [Gossypium mustelinum])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 35  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 94

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 95  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 153

[Close]

BLAST of Spg014629 vs. NCBI nr
Match: KAA3463638.1 (60S ribosomal protein L44-like [Gossypium australe])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 45  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 104

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 105 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 163

[Close]

BLAST of Spg014629 vs. ExPASy Swiss-Prot
Match: Q96499 (60S ribosomal protein L44 OS=Gossypium hirsutum OX=3635 GN=RPL44 PE=3 SV=3)

HSP 1 Score: 217.6 bits (553), Expect = 7.5e-56
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of Spg014629 vs. ExPASy Swiss-Prot
Match: O23290 (60S ribosomal protein L36a OS=Arabidopsis thaliana OX=3702 GN=RPL36AA PE=3 SV=3)

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-52
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           KAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of Spg014629 vs. ExPASy Swiss-Prot
Match: O59870 (60S ribosomal protein L44 OS=Phaffia rhodozyma OX=264483 GN=RPL44 PE=3 SV=3)

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-42
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 120
           KAKTTKK+VLRL+C  CK+  Q  +KRCKHFE+GGDKK KG ++
Sbjct: 61  KAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 104

[Close]

BLAST of Spg014629 vs. ExPASy Swiss-Prot
Match: P0CQ51 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RPL44 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.6e-42
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 120
           KAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK +G ++
Sbjct: 61  KAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 104

[Close]

BLAST of Spg014629 vs. ExPASy Swiss-Prot
Match: P0CQ50 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RPL44 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.6e-42
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 120
           KAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK +G ++
Sbjct: 61  KAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 104

[Close]

BLAST of Spg014629 vs. ExPASy TrEMBL
Match: A0A7J9CRB6 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_002317 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 534 PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 593

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 594 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 652

[Close]

BLAST of Spg014629 vs. ExPASy TrEMBL
Match: A0A7J9K7Z2 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_002409 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 106 PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 165

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 166 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 224

[Close]

BLAST of Spg014629 vs. ExPASy TrEMBL
Match: A0A0D2V4Y2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G133600 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 54  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 113

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 114 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 172

[Close]

BLAST of Spg014629 vs. ExPASy TrEMBL
Match: A0A5B6V3B1 (60S ribosomal protein L44-like OS=Gossypium australe OX=47621 GN=rpl-41 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 45  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 104

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 105 QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 163

[Close]

BLAST of Spg014629 vs. ExPASy TrEMBL
Match: A0A5D2D262 (Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_D04G180600v1 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   PLQTFLDSVKNKFALVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 61
           P   F  S+ +  A+VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK
Sbjct: 26  PSLQFSGSLDSAVAMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRK 85

Query: 62  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 86  QSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 144

[Close]

BLAST of Spg014629 vs. TAIR 10
Match: AT3G23390.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-53
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           KAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of Spg014629 vs. TAIR 10
Match: AT4G14320.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-53
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 121
           KAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of Spg014629 vs. TAIR 10
Match: AT4G14320.2 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 181.0 bits (458), Expect = 5.6e-46
Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 16  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 75
           +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 76  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEI 109
           KAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEI
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEI 93

The following BLAST results are available for this feature:

BLAST of Spg014629 vs. NCBI nr


Match Name	E-value	Identity	Description
MBA0842590.1	3.0e-54	90.76	hypothetical protein [Gossypium armourianum]	[more]
MBA0750941.1	3.0e-54	90.76	hypothetical protein [Gossypium gossypioides]	[more]
XP_012460311.1	3.0e-54	90.76	PREDICTED: 60S ribosomal protein L44-like [Gossypium raimondii] >KJB76839.1 hypo...	[more]
TYI87946.1	3.0e-54	90.76	hypothetical protein E1A91_D04G172500v1, partial [Gossypium mustelinum]	[more]
KAA3463638.1	3.0e-54	90.76	60S ribosomal protein L44-like [Gossypium australe]	[more]

BLAST of Spg014629 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96499	7.5e-56	99.05	60S ribosomal protein L44 OS=Gossypium hirsutum OX=3635 GN=RPL44 PE=3 SV=3	[more]
O23290	3.0e-52	92.38	60S ribosomal protein L36a OS=Arabidopsis thaliana OX=3702 GN=RPL36AA PE=3 SV=3	[more]
O59870	2.1e-42	76.92	60S ribosomal protein L44 OS=Phaffia rhodozyma OX=264483 GN=RPL44 PE=3 SV=3	[more]
P0CQ51	3.6e-42	76.92	60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D ...	[more]
P0CQ50	3.6e-42	76.92	60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D ...	[more]

BLAST of Spg014629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J9CRB6	1.5e-54	90.76	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_002317 PE=3 ...	[more]
A0A7J9K7Z2	1.5e-54	90.76	Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_002409 PE=3 S...	[more]
A0A0D2V4Y2	1.5e-54	90.76	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G133600 PE=3 ...	[more]
A0A5B6V3B1	1.5e-54	90.76	60S ribosomal protein L44-like OS=Gossypium australe OX=47621 GN=rpl-41 PE=3 SV=...	[more]
A0A5D2D262	1.5e-54	90.76	Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_D04G1...	[more]

BLAST of Spg014629 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23390.1	2.1e-53	92.38	Zinc-binding ribosomal protein family protein	[more]
AT4G14320.1	2.1e-53	92.38	Zinc-binding ribosomal protein family protein	[more]
AT4G14320.2	5.6e-46	91.40	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000552	Ribosomal protein L44e	PFAM	PF00935	Ribosomal_L44	coord: 34..108 e-value: 1.1E-34 score: 118.7
IPR000552	Ribosomal protein L44e	PANTHER	PTHR10369	60S RIBOSOMAL PROTEIN L36A/L44	coord: 10..120
IPR000552	Ribosomal protein L44e	PROSITE	PS01172	RIBOSOMAL_L44E	coord: 78..89
None	No IPR available	GENE3D	3.10.450.80		coord: 16..120 e-value: 4.7E-51 score: 173.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	PANTHER	PTHR10369:SF38	60S RIBOSOMAL PROTEIN L44-LIKE	coord: 10..120
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 17..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014629.1	Spg014629.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003735	structural constituent of ribosome