Spg014402 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014402
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pre-mRNA-processing factor 39-like
Location	scaffold3: 41178067 .. 41185159 (-)
RNA-Seq Expression	Spg014402
Synteny	Spg014402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATGCTCCCAAAACTTCAACAGAGACGGCCAGAGATCCATTTATTTGCTGCTCGGTTCAAGGAGCAAAATGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTTGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAACATGGAATATCGTCTGGTAAGATGTCTTAAATAAGTTATGATACATGTTGAATGCTTTTTCTAATTTGGCTGTTGGAATTTTCAGGGGAACCTGGAAGATGCATACTCTGTATATGAACAGGCCATTGCCATCGAAAGAGGAAAAGAACATTCTCGTGCGTTGCCACTGTTATATGCTCAGTACTCAAGGTTTCTGAACTTGGTATGTTGGCTGAAATTGTGGTCCCTGCACTGCTTTCAGCCTATTCACATAATTATGCATTATGCATTTGTTCTTTTGTAGTTTTTCTTTATGCTTCTTTACACCTCTAACTTATTAGTGATCATACTCTTGTGAGGCACATTTTAATTAACAATATAGGTTTCTATGGTTTTTGGATGTTATTGTTTATCTGCAGTTTAAACTAATTTCATTGATAAAATGGGTGGTGGATCGAGAGTTATGATCCAAGACAAAGGAGATTACAAAGACATTACAAAAGCTGGTCCAGTTGGCTCAAATAACTAAGACTATAAAAATTAGGAGGATGAGATTTACACGCACAGAGGTTGAACTCAAGATTTACACCAAGAGAGAGCAACAAAAGTAAAAGAGACCAAACAGAAAAGAGGGATTTTGTTTGTTGTTTAAGATTTGGTTGTTGTAGCAAACAAGGAATCTAATTGCCACCAAAGGATCTTTCTTTTGTGAAGGAAGGATCTTGAAGCACCAAGGAGGGAGGATTGTGAAAGCAGAGAGGAGGATTTGAAAGTAGAGAGGATATAAGATGCAGCCAAGCATCAAAGGAGAAAATCTTCAAGAACCCTGAAAGGAGTATTTTATTATGATTCAAAAAGTCTACAATGCAAAGGATGAACCTTTCATTTACAGAGGATTTGAGCTAACTAATTAAACTAAACTAACAACCTTCCTAAAACAAAGTTACAAAATTATCTTCATGTAATATGCTAGCTCAATTCCCCCCCTCCAAGAACTATGTGGGAAGATATCATGGGCAAGCTTCCCTCTTTCTCTCTTTTTGTTCAACGTAGGGAATGGAGTGGATACCCACTTTTGGGAGCACAAGTGTTTTGGGGACAAACCCTTATGCCCTCTATTTTCTTGATTATACTCTCCCAAGAGGAACCATTTGGTGGCTTATATCCTACCGTTTTTGGGAGCGCTTCCTCTCTTTGTCTTGGTTTCCCGTGTTTGTTGTTTTGATAGGGAAACGATGGATATTGTGGCCTTGGATAGGGGAGTTATGTATTTGGGGACCCAACCCTTCTAAAGGGTTTTCTTGAAGTTTCTTCTTTGTTGCTTAGTGAACCCTCTCCTGTCCTCCTTTTTGTCGCCACGGAAGGTTAAAATTCCCAAGGAAGTTAAATTCTTTGTGTGGCAGTTCCTTCTTGGATGAGTTAATACCCTGGATCGTGTTTTGAGAAAATTGACGGGCTTGATTGGGTCGCGATGTTGTATCCTCTGGAGGGGTGTGACTGAGGATCTCCAACACGTTTTTGGGAGCCATGACTACACTTTTCTACTCTTCAAGCGTTTGGGTTTCATCTTGCTCAACCTAGGGAGCATAGTTATATGATTGCAGAAAGGGGCATTTTTTGTGGCTTGTCGAGCTTTGTGCTATTTTATGGGGTCTTTGGGTTGAGAGAAACAATATAATCTTTAGTAGGGTTGAGAGATCTAAGGAGGAGATGTGGTCCCTTGTGAGGTTCCATGTTATGGACTTTAATTTTTAAGTTAAGGCTTTTTGTAAATATCCTTTGAACACTCTTGTGCTTGATTGGAACTTCGTTTTATTTTAGTTTGGCTCTTTTGGTAGGGGCCTTCTTTTTTGTATCTCCCTTGTATTCATTCATTTTAAGGTTGGTTTTTTCATTTAAAGAAAAACAGAGAAAAAGTACTCTGTCCTTTACATGATATAGAGGTTAGTAATGTTGCTCCGAAATGGTTAGAACCCCAATGGAATATGGTGTTTTCAGCCCATCAAAACTCCAGGGCAACAGCTTATCAAACACCCTAATAATTATAAGTCTATAAAATTGATCTGTGGTCTCTTGGGTTCTTGAAAAAAACACAATATCCAAACTGAAATCTTCATCCAAATCACTCAATTGCTTTTTAACCATGGCCACTGCAACAATCTTTGTCCTTGTTGCTGTTGAAAAAACACAATATCCAAACTGAAATCTTCATCCAAATCACTCAATTGCTAACCATGGCCACTGCAACAAAAATGTTCTTCAGGCATATTAATGTTCTCTTTGTTAACGGAATCAGAAAAATACTAGAAGTCTTCCTCCAAGCTCATCAGCACTGTCTGATTGTTTCTTTCAACTAAATAATAACCAAATACACGAAAAAGTTCTTTGACAAATCTCGTCCTTGACTGTGAGGTTTCTTCTTCAAGAAACCCCATCCAAAGTAGCAAAGAAAGTCACTTGGTTGGCTGGAAAAAAATGTGGCTCCTCAGACATGTGGAGGGTTGGGGATCGGCAATTTGAGAAAAAAAAATTCAGCCTTCTTGTCTAAATGGCTGTGGAGATTTGTGCAACCTGATGGTGCCTTATGGAAGAAAGTCATTGAAAGTAAATTTGGAAATTGTGACCGTAATTGGCTCCCAAACAACAGCACAAAAAAGCATAAATTTAGCCCCTGGAATGGGAAAACATCTGTAAAACGAGAGGCTTTTTTTGAAAACAATATTGTATTCAAAATTGGAAATGTGAGGAAGATTAAATTCAGCCTTCTTGTCTAAATGGCTGTGGAGGGTTGGGGATAGGCAATTTGAGAAAAAAAAATTCAGCCTTCTTGTCTAAATGGCTGTGGAGATTTGTGCAACCTGATGGTGCCTTATGGAAGAAAGTCATTGAAAGTAAATTTGGAAATTGTGACCGTAATTGGCTCCCAAACAACAGCACAAAAAAGCATAAATTTAGCCCCTGGAATGGGAAAACATCTGTAAAACGAGAGGCTTTTTTTGAAAACAATATTGTATTCAAAATTGGAAATGTGAGGAAGATTAAATTTTGGGAGGATAAATGGGCATCGCTAAGACCTTTTTGTGAAGAATTTCCTTCCATTTTTTTCATGGCCAACTCCAAAGGAGCTTCTATCCAAGATTGTTGGTTAGTTGAAGGAGATATTTGGAACCTAACCCTTAGAAGGGGGCTTTTCGATAGGAATTGGAATATTGGATCAATCTCATATCAATCCTAGAAGGTTTCAAGCCAAGTGAAGAGGCCGATCAGATTTGTTGAAATCCATAGGTTTCTTGAGTGTTCACAACCAAACCAGCTTCTAATTTACTTCATGGAAGCTACTGTTTTCTCCATCAGACCCTTTCCAAGTTAATTTGGGAGGGGAAAAGTCCAAGAAGGGTAAATTTATTCATTTGGTCTCTGTCCCATGACCATTTAAACACGTTAGACAGGGCAAAGAAGACATTTATATGGTTCTCTCTCCTAACACTCATTTGGTCTTGCTATTTTTTCTTTGGTCCGTATGGTTTTTTTTAGCAGTTTTAATAATTAGTCATTTATCTAATTATCAGTCATCTCATTTGGGGGCACATGATCAATTGAAGCAGCCTCTTTCTTGGTTTCTGAAGCGTTGTTTTCTTAGAATCTTCTCTCTTCATTGTGTTGACAGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCACTCATTGAGGTACTCTCTCTCCCTCTCTATTTGAAATATTTGAATTTTACTCTCATAAGCGTTGTTTCCCTGTGGTCAAATGTATACTTTTTTGTCTCCATGATTCATCCAGGCCTTGATACATTTTGAGGCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAATGCCCAATACAGAGAACGCAACCGTCGTGAGTGCTTCAATGAGGGAGGAATTATCGAGCATTTTCTTGGAGGTAAAAATAAAGTTCATCATGTTTGGCGGAGGAAAACATGAAGAAACAAGTTTTTACTGGGAATTGTTCATTTGTTTTGGTTGACCTTACATTGATACAGTTTGATTTAAGATAAGTCCCCCCACGTTTTTCCACCTTAATTTATATCTCACTCCGTCTCTTTGGAGTTGTCAATATCTCCATTGCATGTATGATATTCTGTTACAAAATAGTATTTAAATACTTGAACTCGGTGTTTTGCGGGGAGAAACAATATGATTTTTACAGGGGCTGAGAAACCTTTGGAAGAGGTGTGATCTTTTGTTAGATATCCTGTCTCCCTTTAGGTCTCTTTTTTTAAAATTTTTGTAATTATCTCTTAAGTCTTATTTTTCTTGAGTGGAGTCTCTTCTTAGGTTAATTGGCTCATCTTGGATTTATTATTTATTTTTCTTTTTTTGTATTCTTTCATTTTATCTCAATGAAAGATGTGCTTTTTATTAAAAAAAAGAGTACTTATTTGATGATGCTGAAAACTGGAAGTAGATGCTAATGACATGAAATCTTTCTGACATTTTCTTGATCAGAAAATCTCTTGGATATTTTCCTGAATGAGCTCCTTAATGATTTTGCAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGCAAAGCTATTTATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATCTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCACCAGCACAATCGTTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGTGTACAACCGCAAGCCTGGCCTCCTGTCGCTCAGGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGTAAAAGCCTTTTTCATCTTTCATCTTTTTCATTTTTCATATTAATATAAGTCATGCAGTTTATATTCACAAATAAGTGGACGTTTCACACAAAGGTCTAATTACCCTTATGTATTTTCAAAAAAAAAAAAAAAATGCCCTTATGTGTTTTCCTCCGTGCATTCTAATTTATTGGTTCGGAAGACATTACTTCATATATTGTCGCAATTATTTCCTTCCCCCACCAACAAACAAGTCTCCAAAAAGAGAGGAAAAGCACTCTGTTTCCTCTATTCTAAGGATTTGGAACTGTGGCTATAGAAGTGACAATGTTTGCATGTAACTTATATGGTCTGAAGAGATGCTTCTTGAGTTATATGTGAGCTTTTCTCGAAGATTGAAGTTTCTATTAATTTTTGTGGACCTTTCGGTGATTAGGATCTGGACGAAAGGTTGTCTTTCCATTGTCATTTCAACTCTATTTTTGAGAGTTGCGGTTTGGTAGGGGAAGGGAACAAATTGGTCTCTAAGGTAGTTTGGAATAGAGTCAAGTTCATAAATTATATCTTATTTGCCCTTTTCTAGTTTGTTATGTAGAAGGATTTCTCTGTCGCAATTATTTTATGCCTGCTTGAGGATGCCTGACTTTCGTTCTTTTCTTTTGTACGTACATCCGTTTCTTCATCAATATTTATACAAAATATTGATTGCTTACCTCAGTTTTCTTCTTGGGCTTTATTTGATAATGATTTCATTTTTATGGTATTTTTTAAAATTAAGTTTGTTTACTCGTAATTTCTTCAAATTGTTATCTTCTTTTTAAAATAGTTTTGAATTATGAACCAAATTTCGACCCCCAAAAACTTTGTAGTAACAAATTTTCTTAGTTTCTAAAAGAGGGCAGATTTCAAAAATGTTTTGAGAATAATAGTAGTAGATCCCATGCAACTCATTTGTGGAAGGTAAAGGTGAATTCGCTTGTTTCTCTCCACCCCATCCAATTTTTTGTTTCCATATACTTTATTTTTACCCTTCCAGCACATAAATATTAAGTCATTCTGGACATAATGGGCATGCCCTAATTTTAAGATTACAATATTAATGAGCAAACTGTTTCTATTTAAAAAAAATTATTCATGAGCAAACTTGAGGGTATTTTATTTTCCTCAGCAACACGCACACGATAAAGTAAAGAACAGAAAAGGAATAACCCTTCTTCCCGTCTACTTGAACACAGGCATCGTATAGTGGGTATGGAAGCACGTACACGAATCCACAGGTGTCCACATCAGTTTCACAAGCCTCCACTTATGCGACATATCCTCCTACATACCCTGTCCAGGTATTAAATCCTTCTCATCTTTTGCAAATTCCAGAATATTCAGCTAGTTGGCCTTTCTTGACTTGTTCAGAAAAAAGGTTGAAAAAAGGTTGAAAGAGACAGAGAACAATCAACTGTTTTGGGCTTGATGTGTACTCGAACTCAAAGTGATTTTTTGTGAAATATTGTGTTTGTTTACAGCAGCAGGCATATTCTGCTCAGAGTTATGCCCAGCCGACTGCTCAAGCGACAATAGCACCATCGCAGCAGCCAGCTGCAGTCGCTCAGCCGTATTACGGAAGTTACTATATGAATGGATGAGGATTCCCATTAGTTTGTTCGTAACTGTAATCTAAAATTTTTCCCTCATGTACGAATACGATCTACTGACATCCTGTACCCCTGTTTTTTAGGGACATGGGTATGGTATAGCTAACAGAAACTAGGGGACAGTTCTAGAATCATCTTCTGCCTAATTCTTCTTGTCTTTTAATTTTTGATGTGCCAATGAGAAAGTTGTGGTTTGGATATCGGAATTTTTCATTGCCAAGTAGTTATTGAGGTAATGATTTCAACCAACACTGTTTCTTGTGAATGCTTGTTTATTATATGTAGGCAGACCCCTTTTATGTGGTGGATTGATGTTGGTTTGGCATAAATTTTGATGGGAATCTGTGATATAAAGTTAAACTTTGATGTCATATTTGTTGTCAGCTGATACCAACTCTTACA

mRNA sequence

ATGTACATGCTCCCAAAACTTCAACAGAGACGGCCAGAGATCCATTTATTTGCTGCTCGGTTCAAGGAGCAAAATGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTTGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAACATGGAATATCGTCTGGGGAACCTGGAAGATGCATACTCTGTATATGAACAGGCCATTGCCATCGAAAGAGGAAAAGAACATTCTCGTGCGTTGCCACTGTTATATGCTCAGTACTCAAGGTTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCACTCATTGAGGCCTTGATACATTTTGAGGCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAATGCCCAATACAGAGAACGCAACCGTCGTGAGTGCTTCAATGAGGGAGGAATTATCGAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGCAAAGCTATTTATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATCTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCACCAGCACAATCGTTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGTGTACAACCGCAAGCCTGGCCTCCTGTCGCTCAGGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCATCGTATAGTGGGTATGGAAGCACGTACACGAATCCACAGGTGTCCACATCAGTTTCACAAGCCTCCACTTATGCGACATATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCTCAGAGTTATGCCCAGCCGACTGCTCAAGCGACAATAGCACCATCGCAGCAGCCAGCTGCAGTCGCTCAGCCGTATTACGGAAGTTACTATATGAATGGATGA

Coding sequence (CDS)

ATGTACATGCTCCCAAAACTTCAACAGAGACGGCCAGAGATCCATTTATTTGCTGCTCGGTTCAAGGAGCAAAATGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTTGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAACATGGAATATCGTCTGGGGAACCTGGAAGATGCATACTCTGTATATGAACAGGCCATTGCCATCGAAAGAGGAAAAGAACATTCTCGTGCGTTGCCACTGTTATATGCTCAGTACTCAAGGTTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCACTCATTGAGGCCTTGATACATTTTGAGGCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAATGCCCAATACAGAGAACGCAACCGTCGTGAGTGCTTCAATGAGGGAGGAATTATCGAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGCAAAGCTATTTATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATCTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCACCAGCACAATCGTTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGTGTACAACCGCAAGCCTGGCCTCCTGTCGCTCAGGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCATCGTATAGTGGGTATGGAAGCACGTACACGAATCCACAGGTGTCCACATCAGTTTCACAAGCCTCCACTTATGCGACATATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCTCAGAGTTATGCCCAGCCGACTGCTCAAGCGACAATAGCACCATCGCAGCAGCCAGCTGCAGTCGCTCAGCCGTATTACGGAAGTTACTATATGAATGGATGA

Protein sequence

MYMLPKLQQRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG

Homology

[Close]

BLAST of Spg014402 vs. NCBI nr
Match: XP_023004938.1 (pre-mRNA-processing factor 39 isoform X2 [Cucurbita maxima])

HSP 1 Score: 642.5 bits (1656), Expect = 2.1e-180
Identity = 332/343 (96.79%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 432 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 612 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Sbjct: 672 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 732 YPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. NCBI nr
Match: XP_038876250.1 (pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida])

HSP 1 Score: 641.0 bits (1652), Expect = 6.2e-180
Identity = 330/343 (96.21%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLFAARFKEQNGD+AGARASYQLVHTEISPGLLEAIIKHANME+RLGNLEDAYS
Sbjct: 489 KRRPEIHLFAARFKEQNGDVAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAYS 548

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 549 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 608

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQS AKRIDYLDSLVEKVI+PNTENATV SASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 609 IHFEAIQSTAKRIDYLDSLVEKVIVPNTENATVASASMREELSSIFLEFLNLFGDVQSIK 668

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYP VASPAQSLMG YPTGQNQW
Sbjct: 669 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPGVASPAQSLMGVYPTGQNQW 728

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Sbjct: 729 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 788

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YP QQQAY+AQSYAQPTAQ TIAPSQQPA+VAQPYYGSYYMNG
Sbjct: 789 YPAQQQAYTAQSYAQPTAQTTIAPSQQPASVAQPYYGSYYMNG 831

[Close]

BLAST of Spg014402 vs. NCBI nr
Match: XP_038876253.1 (pre-mRNA-processing factor 39 isoform X3 [Benincasa hispida] >XP_038876254.1 pre-mRNA-processing factor 39 isoform X3 [Benincasa hispida])

HSP 1 Score: 641.0 bits (1652), Expect = 6.2e-180
Identity = 330/343 (96.21%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLFAARFKEQNGD+AGARASYQLVHTEISPGLLEAIIKHANME+RLGNLEDAYS
Sbjct: 432 KRRPEIHLFAARFKEQNGDVAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQS AKRIDYLDSLVEKVI+PNTENATV SASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFEAIQSTAKRIDYLDSLVEKVIVPNTENATVASASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYP VASPAQSLMG YPTGQNQW
Sbjct: 612 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPGVASPAQSLMGVYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Sbjct: 672 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YP QQQAY+AQSYAQPTAQ TIAPSQQPA+VAQPYYGSYYMNG
Sbjct: 732 YPAQQQAYTAQSYAQPTAQTTIAPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. NCBI nr
Match: KAG6592841.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 639.8 bits (1649), Expect = 1.4e-179
Identity = 330/343 (96.21%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 465 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 524

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 525 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 584

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFE+IQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 585 IHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 644

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 645 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 704

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQAS+YATYPPT
Sbjct: 705 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPT 764

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 765 YPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807

[Close]

BLAST of Spg014402 vs. NCBI nr
Match: XP_023514089.1 (pre-mRNA-processing factor 39-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.4 bits (1648), Expect = 1.8e-179
Identity = 331/343 (96.50%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 432 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFIS KSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 612 KAEDRHAKLFISRKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Sbjct: 672 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 732 YPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. ExPASy Swiss-Prot
Match: Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 70/270 (25.93%), Postives = 121/270 (44.81%), Query Frame = 0


Query: 10  RRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSV 69
           ++P +HL  A F+EQ G I  AR+  + V   + PGL    ++  ++E R GN+E+A ++
Sbjct: 494 KKPNVHLLWAAFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEAL 553

Query: 70  YEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALI 129
            + AI   R    S        + +R L  V K+ G+A+++L +AVE  E +  L   L+
Sbjct: 554 LQDAITNGRNSSES---SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLL 613

Query: 130 HFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIK 189
             E      +    + +  ++ +  +    + ++ S R+      ++FL  FG D+ ++ 
Sbjct: 614 ELEYSGDVQQNEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLM 673

Query: 190 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKS-YPSVASPAQSLMGAYPTG--- 249
            A ++H +L    +S     KR A++      AK  ++   SVAS     M A   G   
Sbjct: 674 AAYEQHQRLLAEQESF----KRKAENGSEEPDAKRQRTDDQSVASGQMMDMQANHAGYNY 733

Query: 250 -----------QNQWA--ASYGVQPQAWPP 262
                      QN W     YG   Q +PP
Sbjct: 734 NNWYQYNSWGSQNSWGQYGQYGQYNQYYPP 749

[Close]

BLAST of Spg014402 vs. ExPASy TrEMBL
Match: A0A6J1L0W1 (pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.0e-180
Identity = 332/343 (96.79%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 432 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 612 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Sbjct: 672 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 732 YPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. ExPASy TrEMBL
Match: A0A6J1H6A4 (pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 5.6e-179
Identity = 329/343 (95.92%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ RFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 432 KRRPEIHLFSGRFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFE+IQSAAKRIDYLDSLVEKVI+ NTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFESIQSAAKRIDYLDSLVEKVIVSNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 612 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Sbjct: 672 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPVQQQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 732 YPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. ExPASy TrEMBL
Match: A0A6J1KRS7 (pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.6e-179
Identity = 331/343 (96.50%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLF+ARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME+RLGNLE+AYS
Sbjct: 489 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 548

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 549 VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 608

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQSAAKRIDYLDSLVEKVI+PNTENA+VVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 609 IHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIK 668

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+MGAYPTGQNQW
Sbjct: 669 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQW 728

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPT
Sbjct: 729 AASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPT 788

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YPV QQAYSAQSYAQPTAQATI PSQQPA+VAQPYYGSYYMNG
Sbjct: 789 YPV-QQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 830

[Close]

BLAST of Spg014402 vs. ExPASy TrEMBL
Match: A0A1S3CCM2 (pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 328/343 (95.63%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLFAARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANME+RLGNLEDAYS
Sbjct: 432 KRRPEIHLFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYS 491

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 492 VYEQAIAIERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEAL 551

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQS  KRIDYLDSLVEKVI+PNTENATVVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 552 IHFEAIQSTTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 611

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRH KLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMG YPTGQNQW
Sbjct: 612 KAEDRHVKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQW 671

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Sbjct: 672 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 731

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YP QQQAYSAQ+YAQPTAQAT+APSQQ A+VAQPYYGSYYMNG
Sbjct: 732 YPAQQQAYSAQTYAQPTAQATVAPSQQTASVAQPYYGSYYMNG 774

[Close]

BLAST of Spg014402 vs. ExPASy TrEMBL
Match: A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 328/343 (95.63%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +RRPEIHLFAARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANME+RLGNLEDAYS
Sbjct: 489 KRRPEIHLFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYS 548

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           VYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEAL
Sbjct: 549 VYEQAIAIERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEAL 608

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQS  KRIDYLDSLVEKVI+PNTENATVVSASMREELSSIFLEFLNLFGDVQSIK
Sbjct: 609 IHFEAIQSTTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 668

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAEDRH KLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMG YPTGQNQW
Sbjct: 669 KAEDRHVKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQW 728

Query: 249 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 308
           AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT
Sbjct: 729 AASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPT 788

Query: 309 YPVQQQAYSAQSYAQPTAQATIAPSQQPAAVAQPYYGSYYMNG 352
           YP QQQAYSAQ+YAQPTAQAT+APSQQ A+VAQPYYGSYYMNG
Sbjct: 789 YPAQQQAYSAQTYAQPTAQATVAPSQQTASVAQPYYGSYYMNG 831

[Close]

BLAST of Spg014402 vs. TAIR 10
Match: AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.5e-107
Identity = 212/349 (60.74%), Postives = 255/349 (73.07%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S
Sbjct: 427 KKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFS 486

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           +YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EAL
Sbjct: 487 LYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEAL 546

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIK
Sbjct: 547 IHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIK 606

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW
Sbjct: 607 KAEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQW 666

Query: 249 AASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA 308
           +  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Sbjct: 667 SGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYG 726

Query: 309 TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY 349
            YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Sbjct: 727 AYP------AQTYPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 768

[Close]

BLAST of Spg014402 vs. TAIR 10
Match: AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.5e-107
Identity = 212/349 (60.74%), Postives = 255/349 (73.07%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S
Sbjct: 241 KKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFS 300

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           +YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EAL
Sbjct: 301 LYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEAL 360

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIK
Sbjct: 361 IHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIK 420

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW
Sbjct: 421 KAEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQW 480

Query: 249 AASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA 308
           +  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Sbjct: 481 SGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYG 540

Query: 309 TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY 349
            YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Sbjct: 541 AYP------AQTYPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 582

[Close]

BLAST of Spg014402 vs. TAIR 10
Match: AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.5e-107
Identity = 212/349 (60.74%), Postives = 255/349 (73.07%), Query Frame = 0


Query: 9   QRRPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYS 68
           +++PEIHLFAAR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANMEYRLGNL+DA+S
Sbjct: 482 KKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFS 541

Query: 69  VYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEAL 128
           +YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EAL
Sbjct: 542 LYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEAL 601

Query: 129 IHFEAIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIK 188
           IHFEAIQ   + IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIK
Sbjct: 602 IHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIK 661

Query: 189 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGAYPTGQNQW 248
           KAED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ +  AYP  Q QW
Sbjct: 662 KAEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQW 721

Query: 249 AASYGVQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYA 308
           +  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y 
Sbjct: 722 SGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYG 781

Query: 309 TYPPTYPVQQQAYSAQSYAQPTAQA--TIAPSQQPAAVAQP--YYGSYY 349
            YP       Q Y  QSYA P A A    AP QQPAA   P  YY +YY
Sbjct: 782 AYP------AQTYPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 823

[Close]

BLAST of Spg014402 vs. TAIR 10
Match: AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-26
Identity = 66/196 (33.67%), Postives = 112/196 (57.14%), Query Frame = 0


Query: 14  IHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEYRLGNLEDAYSVYEQA 73
           IHLF ARFKE  GD + A  +      E+  G +E + K ANME RLGN E A + Y +A
Sbjct: 369 IHLFNARFKEHVGDASAASVALSRCGEELGFGFVENVTKKANMEKRLGNFEAAVTTYREA 428

Query: 74  I-AIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE 133
           +     GKE+      LY Q+SR   ++  +   A +IL +  E+    K L+E L+   
Sbjct: 429 LNKTLIGKENLETTARLYVQFSRLKYVITNSADDAAQILLEGNENVPHCKLLLEELMRLL 488

Query: 134 AIQSAAKRIDYLDSLVEKVIMPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAED 193
            +   ++++D LD +++K +    +++  +SA  +EE+S++++EF++L G +  ++KA  
Sbjct: 489 MMHGGSRQVDLLDPIIDKELSHQADSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALG 548

Query: 194 RHAKLFISHKSTSELK 209
           RH KLF  H + ++L+
Sbjct: 549 RHIKLF-PHSARAKLR 563

The following BLAST results are available for this feature:

BLAST of Spg014402 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004938.1	2.1e-180	96.79	pre-mRNA-processing factor 39 isoform X2 [Cucurbita maxima]	[more]
XP_038876250.1	6.2e-180	96.21	pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre...	[more]
XP_038876253.1	6.2e-180	96.21	pre-mRNA-processing factor 39 isoform X3 [Benincasa hispida] >XP_038876254.1 pre...	[more]
KAG6592841.1	1.4e-179	96.21	Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023514089.1	1.8e-179	96.50	pre-mRNA-processing factor 39-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg014402 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1JPZ7	1.1e-09	25.93	Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2	[more]

BLAST of Spg014402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0W1	1.0e-180	96.79	pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1H6A4	5.6e-179	95.92	pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846...	[more]
A0A6J1KRS7	9.6e-179	96.50	pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A1S3CCM2	1.6e-178	95.63	pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921...	[more]
A0A1S3CBE2	1.6e-178	95.63	pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921...	[more]

BLAST of Spg014402 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04080.1	1.5e-107	60.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04080.2	1.5e-107	60.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04080.3	1.5e-107	60.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46400.1	3.8e-26	33.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..232 e-value: 3.6E-26 score: 94.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 8..208
None	No IPR available	PANTHER	PTHR17204	PRE-MRNA PROCESSING PROTEIN PRP39-RELATED	coord: 10..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014402.1	Spg014402.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000395	mRNA 5'-splice site recognition
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
cellular_component	GO:0000243	commitment complex
cellular_component	GO:0005685	U1 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0005515	protein binding