Spg014353 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCGCAAAATATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCATCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTCAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGGTAGCGTCTCGACGCTGCCTCGAATTCGCGCCTCCTGCTGAAGGGGCCAGCGTTGAGACTCTCCAATGGTAGCGTCTCAACGCTGCCCTATTATATGGATGCCTTGAACCTCATGTTCTTTTGCAAATTCCTTTTCTTGGGTTAATTCTTTTCCTCCATAATTAACGGTATTCTTCAAAAACATCAATTTCCATTGAAATGCTTGATTCCTACAAAACAAAACCAAATAGACATAAAATTGGCCAAATAGTACCCAAGACTAACGCTAAAATAATATAAAATATAGCTCAATAAATTGCGCTATCAAAGGGTAAGGGCTCGCTTTAGTATGATTATGCATTGAATTTATAATTTCTTGCTTTTTTGATAGATGGCTTATGGGCTGATTATAATGATGGAACATGGCCTGCATGTTGCACTGGAACGAATTTTGATGAGAAGGAGGTACGTTTTTATTAAGATTAGGCTGTTGATATTCATGAAATGATCCAGAGCTGAATTTTTTTAGTGGGTAGAAGTTTGGTGCCAAAGGTCAAAGAGTGTAGAAACTTTTGGTATCAAAAGGTATATAAAAAAGAGCCAAAATTGGATGAGGTTCATGGGATCTAGAAAAGTTCCCCTATTTCTTTCAAATGATCAAATAGCTGTAACTATGCTAGGATTTTGGCTTTGTTCCAAAACTTTCCAAAACTTGTGATCCTCAGAAACTTAAACCATGAAACCCCTGAACCCTATGGGAAAGCATTATGCAAGTTGAAGAGCTAAACAAAACCCTTTCGGCCTGATTTTCATATCTTACTGTTGGTTTTACTTTGATCATTGTGCCATTTACTTTGTTCTTGCAATTGATAGATACAATGTTCAGCATAAGGCATTCTTGTAACATCCTGCATCATTTAATCTTGCAGATTCGTACCTTACTTGAACCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCGTCAACTTGCCATGGTGCAAAAGGATCATTTTGGGCTCATGAGGTGACCGTCACTAGTACAAGATATATTTGGTTCAAAATTGCCCTGATGATACTCAAGTTTTAA ATGGCATCGCAAAATATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCATCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTCAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGATGGCTTATGGGCTGATTATAATGATGGAACATGGCCTGCATGTTGCACTGGAACGAATTTTGATGAGAAGGAGATTCGTACCTTACTTGAACCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCGTCAACTTGCCATGGTGCAAAAGGATCATTTTGGGCTCATGAGGTGACCGTCACTAGTACAAGATATATTTGGTTCAAAATTGCCCTGATGATACTCAAGTTTTAA ATGGCATCGCAAAATATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCATCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTCAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGATGGCTTATGGGCTGATTATAATGATGGAACATGGCCTGCATGTTGCACTGGAACGAATTTTGATGAGAAGGAGATTCGTACCTTACTTGAACCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCGTCAACTTGCCATGGTGCAAAAGGATCATTTTGGGCTCATGAGGTGACCGTCACTAGTACAAGATATATTTGGTTCAAAATTGCCCTGATGATACTCAAGTTTTAA MASQNIYTVHSARQRRDAKDTASRRCRARALIISGKFAASRRCGDGLWADYNDGTWPACCTGTNFDEKEIRTLLEPLKKYWPSLSCSSPSTCHGAKGSFWAHEVTVTSTRYIWFKIALMILKF Homology
BLAST of Spg014353 vs. NCBI nr
Match: TYK17921.1 (ribonuclease 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Spg014353 vs. NCBI nr
Match: KAA0041985.1 (ribonuclease 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Spg014353 vs. NCBI nr
Match: KAG6593061.1 (Ribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25 Identity = 53/64 (82.81%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Spg014353 vs. NCBI nr
Match: XP_008447208.1 (PREDICTED: ribonuclease 2-like [Cucumis melo]) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Spg014353 vs. NCBI nr
Match: KGN45175.2 (hypothetical protein Csa_016228 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.3e-22 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.3e-07 Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06 Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy TrEMBL
Match: A0A5A7TKN5 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004250 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 6.0e-27 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy TrEMBL
Match: A0A5D3D100 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002160 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 6.0e-27 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy TrEMBL
Match: A0A1S3BHR4 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103489711 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.6e-26 Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy TrEMBL
Match: A0A0A0K5E4 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_7G374550 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.3e-25 Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0
BLAST of Spg014353 vs. ExPASy TrEMBL
Match: A0A6J1KXE3 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111498005 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 5.6e-25 Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of Spg014353 vs. TAIR 10
Match: AT2G39780.2 (ribonuclease 2 ) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23 Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Spg014353 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 105.5 bits (262), Expect = 3.0e-23 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Spg014353 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08 Identity = 33/78 (42.31%), Postives = 41/78 (52.56%), Query Frame = 0
BLAST of Spg014353 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08 Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of Spg014353 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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