Spg014235 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCGCCGCCGCTCCCTCCCTCTCACACTCTCTTGCCTCTCGAAGCAGTCAAAGTTACTTATCTCTGTCAGCCCCTAACCCGCGCCATTGGTGAGATCGTGCCGACGCTCACTTTTCAGATTTGGCCCGAGGTTTTTATTTTTTGTTTTATTTTTTAATTTGTTTCGTTGATTTATTTTTCTTCACCTACGAAGAAGAAAATCAAAAGAAGAATGTTAAACCAGTCTAAATGAAACCGTAAAACTAAAAATGCATCAGAGTTTGCTCGAACGGTGTTCAGTTTGCTTCAATATAGAAGAAATTATGATGCATACGAACGTAGGGAAGCGTAATTTTTTTTAAAAAAATATCTCATATGGGATAAAGTTGGAAACGTATTTTTTTTAAAGTTGATAATCCTGTCAAATCCGACCTACATGGAACAGATTTTTTTTTCCTAAAAAAATCAAGATTTCAAATCACAAATGATTTCAAATTCTTTGCCTCTCTTTTGCATCTGATTTCAAATCAGACTGATTTGAAATCCTTCCAAATTCAGGGGTTCCAAACGGGGTTTCGTTCAGTCAGTTCCTATCCTCTATTTCTCTGCCAAACGAAACAGGAATTCCATTTCCAGATTCTCATAAGTTTCCGCTGTATTTCTGTTGTCATTGAATTTTTATCTCTAGTTTAGGTTTCGTTTCCGTAATTTATTTTCTATCTCTGTTTGCGTAGTAGTAACGATTTGGAGCGAAAATTTTCCGTCGGGAGGTGAAATCCGAACATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATGTAAGTCCACACGCTCATTTTTGTATGTATACGAACGGAGGTTGTTGACCATCTTGTGTTGCGCTTGCGTTTTTGTTTCTATCTTGATGATTCCTATTTGCATTAGTAAGAGATCTGGGTTAGTTTTACCCAGAGTTTGGAACCAAGAAAGTTAAGCAAATGATTTAAAACTCTTTATGTTGTTTGGAATAACAAAGATCTGAGAAGAATGTAATTAATTATTTTTTATTTGAATGTTTGATGGAGAGGAAAAGAAAATATTACTAGTATAGGTTTTTAATCTTGAATTATTAAAGGAAAATTAAAATTCGATAGAGCTAAATAAATAATTTATATCAAAATTGTATTAAATCTTGCAAAATCACATCATTCAAGGAAATTTTTTAAGGAAAAACATTATTATCGTGATAACAAACGATGGAATTCATTTGAAATCAATCAAAATGTTGGACCATGAAATATTTGCACTACTTGACAAATGTTTTATTTTCATGAACTTAATCTTTTAATACTTCTACAACAAATAAATTTTGCTTGTTTTTACTAATACCGGGTTTGTTTGAAGTGATTGTTATACTTTTGGAGCAAATTGATAAAAAAGCAGAGGCATTGTCGACTCATTAACCTTTTATCATGTGTGCGTGTATGTACAATTAACTACACGATTTCTGTTCAGTTTCTAAATATGCTCTGTTTTGGATATTCATTGTTGATGGTGATGGCTTATAATTAAGCACTTTCGGTAATAAGTAAATGACTTTAAAAGAAATTACGGTTGCTTGGGATAGCAATTCTTTGTGTCACAAATCACCGTGTTCAGAGTCTTGGTGTCAAGCTATTTAGTCTATTTTCTACTTTTCTGTGTTCTTTCCATCCATCTTTAGAAAATTCATATGATATCTAATTTTTTGCCCTTTTGTTTTTCTACTTGTCCGTGCTTCAGAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGGTTATAATATTCTGCCTTTTCATTCACATATTTCAATAATTGATATGATATTTAGTTTTAAGTGGTAGCTGATTGGCTTTCGGTTGATCATTAGTCGGGTGGTGTTTTGCAAGTTATCTTTAAATAGTAGTTAAAACTGTTTGTTAGCAAAAAAGAAGGTAGTTAAACCGTTTCTAAGAGAATGCTCATTTAGTTAATAATAGTGTTATATATAAGGAGAGCAGTCTTGAGAAATGGTAGAGGTTCACATTTTCTCGAGAGTAATGGTTTATCATGGATATTGCTAATGTCCTCGTATGGCCACTTCGTGAATACCATCGACTGACATTTCTTTTATCCGAACTCTTTCCACCCTGGCCTCCTTATATGGTATGAAAGCTTCAATAACAGAAGTCAACTCAAGGCTTCATTTCTAGACATTCGTATTTGGGAACTTTATCCTATGAACAGGTGTCCTTGACTCCTTGGTTGAGGATAGAACTATGAGATATGAACTTGAGGTAATTTTGACTCTTTAGTAAGTTTATAGTTTGAGAATTCTTCTTCTATTTCCCTAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGTATATTTTCGACTCATTGCATTTAAGATTGTGTCACTCCAAGATTAAACTGGCACGTGTAGAAAGGAATGTACACATGGATAACACAAGACCTTTGCTATCTCTTTCAAGTGCTAAAGTATGAAAGGAGGATTTTTCATTCCAATCCTAAGCATTATGCTCGCATCTGGTTGAAGGTGAGCAAAATCTACATCTTGTTATGTTCCTTAAACAAATGACCAAATGCTGAAAGCTGACCAGCCATAAATTTACTGTCGCTCTGGTTGTGAGAGTGCCCAAACCAATGAAGTCTAAACACAGCTATTCTCCATTCTAATTACTCTTCAATTTATGTGAGTAAAGAGCGAAAGTGGCACTTATATGCGTTCAAGTACTGGTCGAGATACATTGGCTGTCATCATAAATTAAAAAACAGTATTTCAGGATGACACAATATAGCTGATATAATAATCTGAAACAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTAAGTGTAATATTGTGAGATAACTGAGATAATTTTATAAATATTTGCCAATCAAATGTCTCTCTGTACATGAACAAGCAGGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGTAATTTCGGACACCATCGATGAGACTTTACAATAACACATTCTTTACATTTGCAAGATTCTAAATGTGTGATTTTACTAGAGTAAGGCGGAGCCAATGTTTTTCATAGGAAGATAAAATTTTACCCGCCAACTTTTTATATCTACCATATTTTCTTTTCTTTTACTCCTTTAATACAATTGCAATAAATAGATAATCATAAACCAATTTGAAAGTATTAACTCATTAAGGACTTATTTGGAATGACTTTCCAAGTGCTTAAAGGGCTTTTAAGAAGGTGTGGTGCTACTGCTTTCGCTTCCAACTCAAATTCTTTGGATTGAAATTTCGAGCTTTTATCATTGGCAGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGTAACCTCTGGTAGTTCTTATTACTGCTTGCTTAATTGTCTTCTAAACTCTTATTCTTTGAATAACAGGGGTTAATGGAGGAACTTAGAGGCTGACTGTTACACTGAAGATGGAGTTTAGTTGGAGGTGTTTCTGCAAATTGGGAAGGTTAAGAGCCAAATGAGAAAGAAGTCAAAGTGCCAGCCATCCCATTTCTGTAAATTATTATATTTATTGGCAGATGTTTGTTAAGTAACTTATTTAGAGGTTTATTAGTATGGTTTATGGCCCAGTCACAGCCGAAATGAGTTGAATGGAACACTTCCCCAGAAATCTATACCACTTTTCTTTTGATTTCACTCTTTCTAAAAAAAAATCATTTGGGGAGGTTATTATGATGAGATTGACAATGCAAGTTGGATTTATTAGGAGAGAAATGTAAGAATATCTCAATTTTGTATCTAGTGATTATTAGGAGTAGAGAAATTTTAAGATCTATATTCGATAGTTTTAAAGGATGTGACGGTCTATTTTGGAGTTGTATATGTAACAAAGTAAAAG ATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGGGTTAATGGAGGAACTTAGAGGCTGA ATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGGGTTAATGGAGGAACTTAGAGGCTGA MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNGYWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG Homology
BLAST of Spg014235 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida]) HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94 Identity = 187/234 (79.91%), Postives = 195/234 (83.33%), Query Frame = 0
BLAST of Spg014235 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus]) HSP 1 Score: 355.9 bits (912), Expect = 2.6e-94 Identity = 186/234 (79.49%), Postives = 195/234 (83.33%), Query Frame = 0
BLAST of Spg014235 vs. NCBI nr
Match: XP_022964026.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_023000395.1 probable DNA replication complex GINS protein PSF1 [Cucurbita maxima] >KAG6593434.1 DNA replication complex GINS protein PSF1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 354.8 bits (909), Expect = 5.9e-94 Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0
BLAST of Spg014235 vs. NCBI nr
Match: XP_008461089.1 (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461091.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461092.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461093.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >KAA0058768.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa] >TYK10562.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa]) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93 Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0
BLAST of Spg014235 vs. NCBI nr
Match: XP_023514648.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.1 bits (902), Expect = 3.8e-93 Identity = 186/234 (79.49%), Postives = 192/234 (82.05%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19 Identity = 49/118 (41.53%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.1e-18 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17 Identity = 68/224 (30.36%), Postives = 105/224 (46.88%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.1e-17 Identity = 73/229 (31.88%), Postives = 109/229 (47.60%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.0e-17 Identity = 72/236 (30.51%), Postives = 112/236 (47.46%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94 Identity = 186/234 (79.49%), Postives = 195/234 (83.33%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A6J1KI79 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 GN=LOC111494653 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94 Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A6J1HHQ1 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662 GN=LOC111464174 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94 Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94 Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0
BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A5A7UU94 (Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002160 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94 Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0
BLAST of Spg014235 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 ) HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69 Identity = 141/237 (59.49%), Postives = 165/237 (69.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|