Spg014235 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014235
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA replication complex GINS protein PSF1-like
Locationscaffold3: 47547874 .. 47552244 (+)
RNA-Seq ExpressionSpg014235
SyntenySpg014235
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCGCCGCCGCTCCCTCCCTCTCACACTCTCTTGCCTCTCGAAGCAGTCAAAGTTACTTATCTCTGTCAGCCCCTAACCCGCGCCATTGGTGAGATCGTGCCGACGCTCACTTTTCAGATTTGGCCCGAGGTTTTTATTTTTTGTTTTATTTTTTAATTTGTTTCGTTGATTTATTTTTCTTCACCTACGAAGAAGAAAATCAAAAGAAGAATGTTAAACCAGTCTAAATGAAACCGTAAAACTAAAAATGCATCAGAGTTTGCTCGAACGGTGTTCAGTTTGCTTCAATATAGAAGAAATTATGATGCATACGAACGTAGGGAAGCGTAATTTTTTTTAAAAAAATATCTCATATGGGATAAAGTTGGAAACGTATTTTTTTTAAAGTTGATAATCCTGTCAAATCCGACCTACATGGAACAGATTTTTTTTTCCTAAAAAAATCAAGATTTCAAATCACAAATGATTTCAAATTCTTTGCCTCTCTTTTGCATCTGATTTCAAATCAGACTGATTTGAAATCCTTCCAAATTCAGGGGTTCCAAACGGGGTTTCGTTCAGTCAGTTCCTATCCTCTATTTCTCTGCCAAACGAAACAGGAATTCCATTTCCAGATTCTCATAAGTTTCCGCTGTATTTCTGTTGTCATTGAATTTTTATCTCTAGTTTAGGTTTCGTTTCCGTAATTTATTTTCTATCTCTGTTTGCGTAGTAGTAACGATTTGGAGCGAAAATTTTCCGTCGGGAGGTGAAATCCGAACATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATGTAAGTCCACACGCTCATTTTTGTATGTATACGAACGGAGGTTGTTGACCATCTTGTGTTGCGCTTGCGTTTTTGTTTCTATCTTGATGATTCCTATTTGCATTAGTAAGAGATCTGGGTTAGTTTTACCCAGAGTTTGGAACCAAGAAAGTTAAGCAAATGATTTAAAACTCTTTATGTTGTTTGGAATAACAAAGATCTGAGAAGAATGTAATTAATTATTTTTTATTTGAATGTTTGATGGAGAGGAAAAGAAAATATTACTAGTATAGGTTTTTAATCTTGAATTATTAAAGGAAAATTAAAATTCGATAGAGCTAAATAAATAATTTATATCAAAATTGTATTAAATCTTGCAAAATCACATCATTCAAGGAAATTTTTTAAGGAAAAACATTATTATCGTGATAACAAACGATGGAATTCATTTGAAATCAATCAAAATGTTGGACCATGAAATATTTGCACTACTTGACAAATGTTTTATTTTCATGAACTTAATCTTTTAATACTTCTACAACAAATAAATTTTGCTTGTTTTTACTAATACCGGGTTTGTTTGAAGTGATTGTTATACTTTTGGAGCAAATTGATAAAAAAGCAGAGGCATTGTCGACTCATTAACCTTTTATCATGTGTGCGTGTATGTACAATTAACTACACGATTTCTGTTCAGTTTCTAAATATGCTCTGTTTTGGATATTCATTGTTGATGGTGATGGCTTATAATTAAGCACTTTCGGTAATAAGTAAATGACTTTAAAAGAAATTACGGTTGCTTGGGATAGCAATTCTTTGTGTCACAAATCACCGTGTTCAGAGTCTTGGTGTCAAGCTATTTAGTCTATTTTCTACTTTTCTGTGTTCTTTCCATCCATCTTTAGAAAATTCATATGATATCTAATTTTTTGCCCTTTTGTTTTTCTACTTGTCCGTGCTTCAGAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGGTTATAATATTCTGCCTTTTCATTCACATATTTCAATAATTGATATGATATTTAGTTTTAAGTGGTAGCTGATTGGCTTTCGGTTGATCATTAGTCGGGTGGTGTTTTGCAAGTTATCTTTAAATAGTAGTTAAAACTGTTTGTTAGCAAAAAAGAAGGTAGTTAAACCGTTTCTAAGAGAATGCTCATTTAGTTAATAATAGTGTTATATATAAGGAGAGCAGTCTTGAGAAATGGTAGAGGTTCACATTTTCTCGAGAGTAATGGTTTATCATGGATATTGCTAATGTCCTCGTATGGCCACTTCGTGAATACCATCGACTGACATTTCTTTTATCCGAACTCTTTCCACCCTGGCCTCCTTATATGGTATGAAAGCTTCAATAACAGAAGTCAACTCAAGGCTTCATTTCTAGACATTCGTATTTGGGAACTTTATCCTATGAACAGGTGTCCTTGACTCCTTGGTTGAGGATAGAACTATGAGATATGAACTTGAGGTAATTTTGACTCTTTAGTAAGTTTATAGTTTGAGAATTCTTCTTCTATTTCCCTAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGTATATTTTCGACTCATTGCATTTAAGATTGTGTCACTCCAAGATTAAACTGGCACGTGTAGAAAGGAATGTACACATGGATAACACAAGACCTTTGCTATCTCTTTCAAGTGCTAAAGTATGAAAGGAGGATTTTTCATTCCAATCCTAAGCATTATGCTCGCATCTGGTTGAAGGTGAGCAAAATCTACATCTTGTTATGTTCCTTAAACAAATGACCAAATGCTGAAAGCTGACCAGCCATAAATTTACTGTCGCTCTGGTTGTGAGAGTGCCCAAACCAATGAAGTCTAAACACAGCTATTCTCCATTCTAATTACTCTTCAATTTATGTGAGTAAAGAGCGAAAGTGGCACTTATATGCGTTCAAGTACTGGTCGAGATACATTGGCTGTCATCATAAATTAAAAAACAGTATTTCAGGATGACACAATATAGCTGATATAATAATCTGAAACAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTAAGTGTAATATTGTGAGATAACTGAGATAATTTTATAAATATTTGCCAATCAAATGTCTCTCTGTACATGAACAAGCAGGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGTAATTTCGGACACCATCGATGAGACTTTACAATAACACATTCTTTACATTTGCAAGATTCTAAATGTGTGATTTTACTAGAGTAAGGCGGAGCCAATGTTTTTCATAGGAAGATAAAATTTTACCCGCCAACTTTTTATATCTACCATATTTTCTTTTCTTTTACTCCTTTAATACAATTGCAATAAATAGATAATCATAAACCAATTTGAAAGTATTAACTCATTAAGGACTTATTTGGAATGACTTTCCAAGTGCTTAAAGGGCTTTTAAGAAGGTGTGGTGCTACTGCTTTCGCTTCCAACTCAAATTCTTTGGATTGAAATTTCGAGCTTTTATCATTGGCAGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGTAACCTCTGGTAGTTCTTATTACTGCTTGCTTAATTGTCTTCTAAACTCTTATTCTTTGAATAACAGGGGTTAATGGAGGAACTTAGAGGCTGACTGTTACACTGAAGATGGAGTTTAGTTGGAGGTGTTTCTGCAAATTGGGAAGGTTAAGAGCCAAATGAGAAAGAAGTCAAAGTGCCAGCCATCCCATTTCTGTAAATTATTATATTTATTGGCAGATGTTTGTTAAGTAACTTATTTAGAGGTTTATTAGTATGGTTTATGGCCCAGTCACAGCCGAAATGAGTTGAATGGAACACTTCCCCAGAAATCTATACCACTTTTCTTTTGATTTCACTCTTTCTAAAAAAAAATCATTTGGGGAGGTTATTATGATGAGATTGACAATGCAAGTTGGATTTATTAGGAGAGAAATGTAAGAATATCTCAATTTTGTATCTAGTGATTATTAGGAGTAGAGAAATTTTAAGATCTATATTCGATAGTTTTAAAGGATGTGACGGTCTATTTTGGAGTTGTATATGTAACAAAGTAAAAG

mRNA sequence

ATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGGGTTAATGGAGGAACTTAGAGGCTGA

Coding sequence (CDS)

ATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGGGTTAATGGAGGAACTTAGAGGCTGA

Protein sequence

MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNGYWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG
Homology
BLAST of Spg014235 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 187/234 (79.91%), Postives = 195/234 (83.33%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKEL SGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVKELTSGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           EIIRSLIWKIVGS +PPEIQEKLSN+EEEYFKKHSA +KEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 EIIRSLIWKIVGSMIPPEIQEKLSNSEEEYFKKHSARVKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.6e-94
Identity = 186/234 (79.49%), Postives = 195/234 (83.33%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKELASGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           EIIRSL+WK+VGS +PPEIQEKLSN+EEEYFKKHSA LKEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 EIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEEL G
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELTG 200

BLAST of Spg014235 vs. NCBI nr
Match: XP_022964026.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_023000395.1 probable DNA replication complex GINS protein PSF1 [Cucurbita maxima] >KAG6593434.1 DNA replication complex GINS protein PSF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.8 bits (909), Expect = 5.9e-94
Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKELASGEKGQL  +NSDLFEQVISECQQHHLELQSL+             
Sbjct: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLL------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RKIQ+EGLD+QTTKNEDHFGAL+HHLALVRNKRCLMAYVYNRA
Sbjct: 61  -----------------RKIQDEGLDLQTTKNEDHFGALVHHLALVRNKRCLMAYVYNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWKIVGS LPPEIQEKLSN+EEEYFKKHSA LKEYMSKMELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. NCBI nr
Match: XP_008461089.1 (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461091.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461092.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461093.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >KAA0058768.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa] >TYK10562.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLV ELASGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWK++GS +PPEIQEKLSN+EEEYFKKHSA LKEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. NCBI nr
Match: XP_023514648.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 3.8e-93
Identity = 186/234 (79.49%), Postives = 192/234 (82.05%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVK LASGEKGQL  +NSDLFEQVISECQQHHLELQSL+             
Sbjct: 1   MYGRKACQLVKVLASGEKGQLAQFNSDLFEQVISECQQHHLELQSLL------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RKIQ+EGLD+QTTKNEDHFGAL+HHLALVRNKRCLMAYVYNRA
Sbjct: 61  -----------------RKIQDEGLDLQTTKNEDHFGALVHHLALVRNKRCLMAYVYNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWKIVGS LPPEIQEKLSN+EEEYFKKHSA LKEYMSKMELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 49/118 (41.53%), Postives = 77/118 (65.25%), Query Frame = 0

Query: 98  ALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAH 157
           A+  H ++ R+KRC++AY+  R   I+   W    S LP +++E+LS  E ++F ++   
Sbjct: 61  AITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSLLPDQLKERLSQNEIQFFSEYDKI 120

Query: 158 LKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTD 216
           L EY SK+ LDLT+D  PPK+ YI+VRV+ ++GE +VL+   T N   ++ HFLKR+D
Sbjct: 121 LTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGE-VVLNSGCTVNLNLNTTHFLKRSD 177

BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.1e-18
Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           M+  KA +LV+EL    +GQL  +N D   QV+ E +  + + QS ++E+   G      
Sbjct: 1   MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAG------ 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                                  G  + T K          H AL+RN+RC +AY+Y+R 
Sbjct: 61  ----------------------RGDLIPTVK--------FRHCALLRNRRCTIAYLYDRL 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKM----ELDLTVDMVPP 180
             IR+L W+  GS LP  ++  +S  E E+F  +   L  YM  +     LD+T D+ PP
Sbjct: 121 LRIRALRWE-YGSVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPP 180

Query: 181 KDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYI 221
           K  YI+VR L D GE   + D  +    ++S HFL R   EQ I
Sbjct: 181 KSLYIEVRCLKDYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLI 186

BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 68/224 (30.36%), Postives = 105/224 (46.88%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           M+  KA +L++EL     GQL  +N D   Q++ E +  + + Q+ ++E+          
Sbjct: 1   MFCEKAIELIRELQRASDGQLPAFNEDGIRQILEEMKALYEQNQADVNEA---------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                             K +     + T K          H  L+RN+RC++AY+Y+R 
Sbjct: 61  ------------------KTEGRSDLIPTIK--------FRHCCLLRNRRCIVAYLYDRL 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKM----ELDLTVDMVPP 180
             IR+L W+  GS LP  ++  +S  E ++F ++   L  YM  +     LD+T DM PP
Sbjct: 121 LRIRALRWE-YGSVLPSALRFHMSTEEMDWFNQYKRSLATYMRSLGGEEGLDITQDMKPP 180

Query: 181 KDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYI 221
           K  YI+VR L D GE   + D  T    ++S HFL R   EQ I
Sbjct: 181 KSLYIEVRCLRDYGE-FEIDDGTTILLKKNSQHFLPRWKCEQLI 186

BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-17
Identity = 73/229 (31.88%), Postives = 109/229 (47.60%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           M+  KA +LV+EL    +G+L  +N D   QV+ E +  + + QS ++E+          
Sbjct: 1   MFCEKAMELVRELHRAAEGRLPAFNEDGLRQVLEEMKALYEQNQSDVNEA---------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                             K    G  + T K          H +L+RN+RC +AY+Y+R 
Sbjct: 61  ------------------KSSGRGDLIPTIK--------FRHCSLLRNQRCTVAYLYDRL 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKM----ELDLTVDMVPP 180
             IR+L W+  GS LP  ++  +S  E ++F ++   L  YM  +     LD+T DM PP
Sbjct: 121 LRIRALRWE-YGSVLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPP 180

Query: 181 KDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGI 226
           K  YI+VR L D GE   + D  +    ++S HFL R   EQ I R GI
Sbjct: 181 KSLYIEVRCLKDYGE-FEVEDGTSVLLKKNSQHFLPRWKCEQLI-RQGI 190

BLAST of Spg014235 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.0e-17
Identity = 72/236 (30.51%), Postives = 112/236 (47.46%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           M+  KA +L++EL    +GQL  +N D   QV+ E +  + + QS ++E+         G
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAK------SGG 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
             +L                      + T K          H +L+RN+RC +AY+Y+R 
Sbjct: 61  RSDL----------------------IPTIK--------FRHCSLLRNRRCTVAYLYDRL 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKM----ELDLTVDMVPP 180
             IR+L W+  GS LP  ++  ++  E E+F  +   L  YM  +     LD+T DM PP
Sbjct: 121 LRIRALRWE-YGSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPP 180

Query: 181 KDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEEL 233
           K  YI+VR L D GE   + D  +    ++S HFL R   EQ I +    G++E +
Sbjct: 181 KSLYIEVRCLKDYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLIRQ----GVLEHI 194

BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 186/234 (79.49%), Postives = 195/234 (83.33%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKELASGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           EIIRSL+WK+VGS +PPEIQEKLSN+EEEYFKKHSA LKEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 EIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEEL G
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELTG 200

BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A6J1KI79 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 GN=LOC111494653 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94
Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKELASGEKGQL  +NSDLFEQVISECQQHHLELQSL+             
Sbjct: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLL------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RKIQ+EGLD+QTTKNEDHFGAL+HHLALVRNKRCLMAYVYNRA
Sbjct: 61  -----------------RKIQDEGLDLQTTKNEDHFGALVHHLALVRNKRCLMAYVYNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWKIVGS LPPEIQEKLSN+EEEYFKKHSA LKEYMSKMELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A6J1HHQ1 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662 GN=LOC111464174 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94
Identity = 187/234 (79.91%), Postives = 193/234 (82.48%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLVKELASGEKGQL  +NSDLFEQVISECQQHHLELQSL+             
Sbjct: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLL------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RKIQ+EGLD+QTTKNEDHFGAL+HHLALVRNKRCLMAYVYNRA
Sbjct: 61  -----------------RKIQDEGLDLQTTKNEDHFGALVHHLALVRNKRCLMAYVYNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWKIVGS LPPEIQEKLSN+EEEYFKKHSA LKEYMSKMELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94
Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLV ELASGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWK++GS +PPEIQEKLSN+EEEYFKKHSA LKEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. ExPASy TrEMBL
Match: A0A5A7UU94 (Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002160 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94
Identity = 185/234 (79.06%), Postives = 194/234 (82.91%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRKA QLV ELASGEKGQLTH+NSDLFEQVISECQQHHLELQSLI             
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+QEEGLD+QTTKNEDHFGALIHHLALVRNKRCLMAYV+NRA
Sbjct: 61  -----------------RKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRA 120

Query: 121 EIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPY 180
           E IRSLIWK++GS +PPEIQEKLSN+EEEYFKKHSA LKEYMSK+ELDLTVDMVPPKDPY
Sbjct: 121 ETIRSLIWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPY 180

Query: 181 IQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           IQVRVLDDIGEGIVLSDDKTANFA HSIHFLKRTDAEQYISR    GLMEELRG
Sbjct: 181 IQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISR----GLMEELRG 200

BLAST of Spg014235 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 )

HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69
Identity = 141/237 (59.49%), Postives = 165/237 (69.62%), Query Frame = 0

Query: 1   MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNG 60
           MYGRK  QL+K+ A+GEKGQL  +NS LF++ I EC Q+H  +QSLI             
Sbjct: 1   MYGRKGYQLIKDFATGEKGQLKPFNSKLFDETIEECDQNHHLIQSLI------------- 60

Query: 61  YWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRA 120
                            RK+Q+EGLDVQ  +N DH+GALIHHLAL+RNKRCLMAYVYNRA
Sbjct: 61  -----------------RKMQQEGLDVQNNRNADHYGALIHHLALIRNKRCLMAYVYNRA 120

Query: 121 EIIRSLIWKIVGSR---LPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPK 180
           EI+R L W+ VG     LP EIQEKL+  E+EYFK HS  LK YM K+ ++L VDMVPPK
Sbjct: 121 EIVRDLAWR-VGLELLDLPSEIQEKLTTLEKEYFKNHSVALKSYMGKVGIELNVDMVPPK 180

Query: 181 DPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 235
           DPYI+VR+LDDI EGIVLS DKT NFARHS+HFLKRTDAE YI+R    G MEEL G
Sbjct: 181 DPYIKVRILDDIDEGIVLS-DKTTNFARHSMHFLKRTDAEPYIAR----GQMEELTG 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038897311.11.2e-9479.91probable DNA replication complex GINS protein PSF1 [Benincasa hispida][more]
XP_004135842.12.6e-9479.49probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1... [more]
XP_022964026.15.9e-9479.91probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_0230... [more]
XP_008461089.11.3e-9379.06PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP... [more]
XP_023514648.13.8e-9379.49probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q54HR63.8e-1941.53Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum O... [more]
Q9CZ157.1e-1832.14DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1... [more]
Q7ZT471.6e-1730.36DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=... [more]
A4IFH42.1e-1731.88DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV... [more]
Q146916.0e-1730.51DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K8U81.3e-9479.49Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 S... [more]
A0A6J1KI792.8e-9479.91probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1HHQ12.8e-9479.91probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662... [more]
A0A1S3CDY26.3e-9479.06probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7UU946.3e-9479.06Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa O... [more]
Match NameE-valueIdentityDescription
AT1G80190.12.4e-6959.49partner of SLD five 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 72..147
e-value: 3.1E-7
score: 30.8
NoneNo IPR availableGENE3D1.20.58.1030coord: 1..165
e-value: 2.0E-36
score: 127.1
IPR005339GINS complex, subunit Psf1PANTHERPTHR12914PARTNER OF SLD5coord: 1..48
coord: 75..223
IPR005339GINS complex, subunit Psf1CDDcd11710GINS_A_psf1coord: 3..167
e-value: 5.30625E-42
score: 137.386
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 75..177
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014235.1Spg014235.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902983 DNA strand elongation involved in mitotic DNA replication
biological_process GO:0006260 DNA replication
cellular_component GO:0000811 GINS complex