Spg013426 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013426
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine proteinase inhibitor 6-like
Locationscaffold1: 10952999 .. 10953616 (+)
RNA-Seq ExpressionSpg013426
SyntenySpg013426
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTATTGCTCCGATTGCCTCCAGTGGCTCATATGTGCAAGCAATGGGAAATTTTGCAGTGATGGAGCATAAACGCGGAGTGTTAGGGATAGATATGTCGTTTTTTCGCGTGGTGAAGTATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGCTAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCACAATGCGGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGACTCCCTATTGTCCCCGGTAATTTCCAATGCCTAGTTTGATGAGGAAAGCTATCTTATCTACTTTAGATGATGCCTAAGTTTGCATTATCTTTATCTATCAAGTATAATGTGAGAATAAAGTAAAGATTATCTATGTTTAATCTTGTATTAAAATAGGGTTGTTTCTCTTTGATTTTTCTCTCTTTCATTAAAAACGTACCGAACCTTCCCAAATTTCATCAACTCAACAATTCTCATAATTATCATGAATCAACTTAAAAATTAAATGACATAGTTGTATTATTTATGTGAATATCAACTTTAGGGCAAATGATGTTTAG

mRNA sequence

ATGGCTGCTATTGCTCCGATTGCCTCCAGTGGCTCATATGTGCAAGCAATGGGAAATTTTGCAGTGATGGAGCATAAACGCGGAGTGTTAGGGATAGATATGTCGTTTTTTCGCGTGGTGAAGTATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGCTAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCACAATGCGGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGACTCCCTATTGTCCCCGGGCAAATGATGTTTAG

Coding sequence (CDS)

ATGGCTGCTATTGCTCCGATTGCCTCCAGTGGCTCATATGTGCAAGCAATGGGAAATTTTGCAGTGATGGAGCATAAACGCGGAGTGTTAGGGATAGATATGTCGTTTTTTCGCGTGGTGAAGTATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGCTAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCACAATGCGGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGACTCCCTATTGTCCCCGGGCAAATGATGTTTAG

Protein sequence

MAAIAPIASSGSYVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVVAPPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPYCPRANDV
Homology
BLAST of Spg013426 vs. NCBI nr
Match: KAG6604292.1 (putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.6 bits (174), Expect = 4.6e-09
Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 0

Query: 6   PIASSGSYVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVV 65
           P+     YVQ +G FAVMEH  G+ G+ M+F RVV  E  K+     KY+L+VEV E  V
Sbjct: 25  PVNVHDQYVQELGRFAVMEHVHGLCGVGMTFIRVVSGE-SKMVCEGKKYSLVVEVKEVPV 84

Query: 66  APPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPYCP 105
            P    + K+YVA V+     KSW LL F    L P  P
Sbjct: 85  LPHLCPAIKLYVADVLDKQCAKSWELLAFKPFCLPPMGP 122

BLAST of Spg013426 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08
Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 0

Query: 6   PIASSGSYVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVV 65
           P+     YVQ +G FAVMEH  G+ G+ M+F RVV  E  K+     KY+L+VEV E +V
Sbjct: 25  PVNVHDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGE-SKMVCEGKKYSLVVEVKEVLV 84

Query: 66  APPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPYCP 105
            P    + K+YVA V+     KSW LL F    L P  P
Sbjct: 85  LPHQCPAIKLYVAEVLDKQCAKSWELLAFKPFCLPPMGP 122

BLAST of Spg013426 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 0

Query: 13  YVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVVAPPFQSS 72
           Y+QAMG FAV EH   + GI+  F  V    +  +     KY+LLV+V E ++AP F   
Sbjct: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87

Query: 73  RKVYVAGVMHNADEKSWTLLCFDSV 98
            K+Y+A V+HN    SW LL F++V
Sbjct: 88  EKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Spg013426 vs. NCBI nr
Match: XP_022949716.1 (uncharacterized protein LOC111453027 [Cucurbita moschata])

HSP 1 Score: 67.8 bits (164), Expect = 6.7e-08
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 6   PIASSGSYVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVV 65
           P+     YVQ +G FAVMEH  G+ G+ M+F  VV  E  K+     KY+L+VEV E  V
Sbjct: 25  PVNVHDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGE-SKMVCEGKKYSLVVEVKEVPV 84

Query: 66  APPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPYCP 105
            P    + K+YVA V+     KSW LL F    L P  P
Sbjct: 85  LPHACPAIKLYVADVLDKQCAKSWELLAFKPFCLPPMGP 122

BLAST of Spg013426 vs. NCBI nr
Match: KAG6603239.1 (hypothetical protein SDJN03_03848, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0

Query: 6   PIASSGS--YVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLEN 65
           PI  +GS  Y +AMG FA  +H    LG+   F  VV  E   +D    KY L ++++EN
Sbjct: 14  PILDAGSDPYFEAMGKFA-FDHAPHGLGVQRRFHSVVIVEYKVVDGVGKKYRLCLKLVEN 73

Query: 66  VVAPPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPY 103
           VVAP  +   ++YVA V+   D++S  L+ FD VDL P+
Sbjct: 74  VVAPHSKKYERLYVAIVLQK-DDQSRELVSFDLVDLWPH 110

BLAST of Spg013426 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 0

Query: 13  YVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVVAPPFQSS 72
           Y+QAMG FAV EH   + GI+  F  V    +  +     KY+LLV+V E ++AP F   
Sbjct: 28  YLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFPKY 87

Query: 73  RKVYVAGVMHNADEKSWTLLCFDSV 98
            K+Y+A V+HN    SW LL F++V
Sbjct: 88  EKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Spg013426 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 6   PIASSGSYVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVV 65
           P+     YVQ +G FAVMEH  G+ G+ M+F  VV  E  K+     KY+L+VEV E  V
Sbjct: 25  PVNVHDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGE-SKMVCEGKKYSLVVEVKEVPV 84

Query: 66  APPFQSSRKVYVAGVMHNADEKSWTLLCFDSVDLTPYCP 105
            P    + K+YVA V+     KSW LL F    L P  P
Sbjct: 85  LPHACPAIKLYVADVLDKQCAKSWELLAFKPFCLPPMGP 122

BLAST of Spg013426 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 13  YVQAMGNFAVMEHKRGVLGIDMSFFRVVKYEILKLDNARSKYNLLVEVLENVVAPPFQSS 72
           YVQ +G FAVMEH   + G    F RVV  E   +     KY L++EV E ++ P   SS
Sbjct: 35  YVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVKETIIIPSMPSS 94

Query: 73  RKVYVAGVMHNADEKSWTLLCF 95
            K + A ++  A EKSW LL F
Sbjct: 95  IKFFKAIMLDKAWEKSWALLSF 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6604292.14.6e-0943.43putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp.... [more]
XP_023543511.11.0e-0843.43cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
KGN53820.12.3e-0842.35hypothetical protein Csa_014847 [Cucumis sativus][more]
XP_022949716.16.7e-0842.42uncharacterized protein LOC111453027 [Cucurbita moschata][more]
KAG6603239.11.6e-0640.40hypothetical protein SDJN03_03848, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KW141.1e-0842.35Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1[more]
A0A6J1GCT23.2e-0842.42uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
A0A6J1BU611.8e-0642.68cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 1..97
e-value: 1.9E-6
score: 30.0
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013426.1Spg013426.1mRNA