Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAACACAACAAAATGGCATCAAATAACTGTAATGTGTTTTTGGGAGCTTGTGCTATCATAGTCCTCAGATTTCACCTTACAATCTATCAAACAGATGCTAGAAAAATTTTGATAGCCAATGAAGACAACTCCATTCTAGAAAGGGAATTGAGGGATAACTTTATAAAACATCCAAAAGGCATACACATTCCTCCATCAGTCATTTTAATAGAGCCCAAGGTCAACTTTGGAATGCTACCAAAAAGCGTACGTATTCCTCCATCTGGGCCGAGTCAAAGGACATCAGACTATCTGCCTCCTACACCACGTGCTCCATCTGTCATTTTAAATAAAGAATCTAAGGTGGAATTTGGAATGTTACCAAAAGGAGCACGTATTCCTCCATCTGGACCGAGTCAAAGGACATCAGATTATCCAGCTCCACCACCTTCTGTCCCATCATTCAGTTTAAAGAAGGAATCTAGAATTAACTTTGGAATACTACCAAAAGGTGTACGTATTCCTCCGTCTAGACCAAGTCAAAGGACTTCAGACTATCCGTCTCCTCCACCACATGTTCCACCATCTGGAGGGAGTGGAAGGCACGATTAA
mRNA sequence
ATGGGAAAACACAACAAAATGGCATCAAATAACTGTAATGTGTTTTTGGGAGCTTGTGCTATCATAGTCCTCAGATTTCACCTTACAATCTATCAAACAGATGCTAGAAAAATTTTGATAGCCAATGAAGACAACTCCATTCTAGAAAGGGAATTGAGGGATAACTTTATAAAACATCCAAAAGGCATACACATTCCTCCATCAGTCATTTTAATAGAGCCCAAGGTCAACTTTGGAATGCTACCAAAAAGCGTACGTATTCCTCCATCTGGGCCGAGTCAAAGGACATCAGACTATCTGCCTCCTACACCACGTGCTCCATCTGTCATTTTAAATAAAGAATCTAAGGTGGAATTTGGAATGTTACCAAAAGGAGCACGTATTCCTCCATCTGGACCGAGTCAAAGGACATCAGATTATCCAGCTCCACCACCTTCTGTCCCATCATTCAGTTTAAAGAAGGAATCTAGAATTAACTTTGGAATACTACCAAAAGGTGTACGTATTCCTCCGTCTAGACCAAGTCAAAGGACTTCAGACTATCCGTCTCCTCCACCACATGTTCCACCATCTGGAGGGAGTGGAAGGCACGATTAA
Coding sequence (CDS)
ATGGGAAAACACAACAAAATGGCATCAAATAACTGTAATGTGTTTTTGGGAGCTTGTGCTATCATAGTCCTCAGATTTCACCTTACAATCTATCAAACAGATGCTAGAAAAATTTTGATAGCCAATGAAGACAACTCCATTCTAGAAAGGGAATTGAGGGATAACTTTATAAAACATCCAAAAGGCATACACATTCCTCCATCAGTCATTTTAATAGAGCCCAAGGTCAACTTTGGAATGCTACCAAAAAGCGTACGTATTCCTCCATCTGGGCCGAGTCAAAGGACATCAGACTATCTGCCTCCTACACCACGTGCTCCATCTGTCATTTTAAATAAAGAATCTAAGGTGGAATTTGGAATGTTACCAAAAGGAGCACGTATTCCTCCATCTGGACCGAGTCAAAGGACATCAGATTATCCAGCTCCACCACCTTCTGTCCCATCATTCAGTTTAAAGAAGGAATCTAGAATTAACTTTGGAATACTACCAAAAGGTGTACGTATTCCTCCGTCTAGACCAAGTCAAAGGACTTCAGACTATCCGTCTCCTCCACCACATGTTCCACCATCTGGAGGGAGTGGAAGGCACGATTAA
Protein sequence
MGKHNKMASNNCNVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPKGIHIPPSVILIEPKVNFGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGMLPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDYPSPPPHVPPSGGSGRHD
Homology
BLAST of Spg013184 vs. NCBI nr
Match:
KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 192.6 bits (488), Expect = 3.3e-45
Identity = 101/165 (61.21%), Postives = 118/165 (71.52%), Query Frame = 0
Query: 30 IYQTDARKILIANEDNSILERELRDNFIKHPKGIHIPPS--------VILIEPKVNFGML 89
+Y+TDA+K++ + ++I E EL D +KHPKGI I S + P V ML
Sbjct: 25 VYETDAKKVVEVDVYDTIREEELTDQMVKHPKGISISSSRSSQRTLFHLTPPPPVVLRML 84
Query: 90 PKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGMLPKGARIPPSGPSQRTSDYP 149
PK V I PSGPSQRTSDY PP PRA SVIL+K+SK+ FGMLPKG IPPSGPSQRTSDYP
Sbjct: 85 PKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTSDYP 144
Query: 150 APPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDYPSPPP 187
PPP S L K+S+INFG+LPKGV IPPS PSQRTS+YP PPP
Sbjct: 145 PPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPP 189
BLAST of Spg013184 vs. NCBI nr
Match:
XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])
HSP 1 Score: 188.7 bits (478), Expect = 4.7e-44
Identity = 99/165 (60.00%), Postives = 116/165 (70.30%), Query Frame = 0
Query: 30 IYQTDARKILIANEDNSILERELRDNFIKHPKGIHIPPSVI--------LIEPKVNFGML 89
IY+TDA+ ++ + D++I E EL D +++PKGI I S P + FGML
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244
Query: 90 PKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGMLPKGARIPPSGPSQRTSDYP 149
PK V IPPS PSQRTSDY PP PRA S+ILNK SK+ GMLP+G IPPSGPSQRTSDYP
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304
Query: 150 APPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDYPSPPP 187
PPP S L K+S+INFG+LPKGV IPPS PSQRTS YP PPP
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPP 349
BLAST of Spg013184 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 182.6 bits (462), Expect = 3.4e-42
Identity = 99/182 (54.40%), Postives = 119/182 (65.38%), Query Frame = 0
Query: 13 NVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPK-GIHIP----P 72
NVF GACA I L H TIYQTDA+ + + + +S +E EL D IKHPK IH
Sbjct: 8 NVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIHFSLGKYK 67
Query: 73 SVILIEPKVNFGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGMLPKGAR 132
+ + P N G+L K R+PPSG SQ TSD PP P S+IL+KES++ F +L KG R
Sbjct: 68 RIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFRVLSKGNR 127
Query: 133 IPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDYPSPPPH 190
IPPSGPSQRTS+ P PPP S L K+ INFGILPK + IPPS PS+R S+YPSPP H
Sbjct: 128 IPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFSNYPSPPTH 187
BLAST of Spg013184 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 175.6 bits (444), Expect = 4.1e-40
Identity = 100/191 (52.36%), Postives = 124/191 (64.92%), Query Frame = 0
Query: 7 MASNNCNVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPKGI-HI 66
M S N+F ACA+I L H IY T+A++ + +EDNS LE LR + I HPK + H
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 67 ----PPSVILIEPKVNFGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGM 126
P + + P + G+L K +R PPSG SQ TS+ PP+P +IL+KES V FG+
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFGI 120
Query: 127 LPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDY 186
LPKG RIPPSGPS+RTSD PPP + +F KESRI +GILPKGVRIPPS PS+R SDY
Sbjct: 121 LPKGVRIPPSGPSRRTSD---PPPPLSNFHSIKESRIKYGILPKGVRIPPSGPSKRNSDY 180
Query: 187 PSPPP---HVP 190
PPP H P
Sbjct: 181 YPPPPMHLHAP 187
BLAST of Spg013184 vs. NCBI nr
Match:
KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 171.4 bits (433), Expect = 7.8e-39
Identity = 99/188 (52.66%), Postives = 123/188 (65.43%), Query Frame = 0
Query: 7 MASNNCNVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPKG-IHI 66
M S + N+ CAI++L H IYQT+ R + EDNS+ E EL+ N I HPK IH
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 67 PPSVILIEPKVN----FGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGM 126
+ +P+ + FG+ K VRIPPSGPSQR+SD +P +PS+IL KES++ FG+
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSD----SPPSPSMILPKESRINFGI 120
Query: 127 LPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDY 186
LPKG+RIPPSGPSQR SD P P PS L K S + FG+LPKG IPPS PS+RTSD
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSDN 180
Query: 187 PSPPPHVP 190
P PPPH P
Sbjct: 181 PPPPPHSP 180
BLAST of Spg013184 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44
Identity = 99/165 (60.00%), Postives = 116/165 (70.30%), Query Frame = 0
Query: 30 IYQTDARKILIANEDNSILERELRDNFIKHPKGIHIPPSVI--------LIEPKVNFGML 89
IY+TDA+ ++ + D++I E EL D +++PKGI I S P + FGML
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244
Query: 90 PKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGMLPKGARIPPSGPSQRTSDYP 149
PK V IPPS PSQRTSDY PP PRA S+ILNK SK+ GMLP+G IPPSGPSQRTSDYP
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304
Query: 150 APPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDYPSPPP 187
PPP S L K+S+INFG+LPKGV IPPS PSQRTS YP PPP
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPP 349
BLAST of Spg013184 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 2.0e-40
Identity = 100/191 (52.36%), Postives = 124/191 (64.92%), Query Frame = 0
Query: 7 MASNNCNVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPKGI-HI 66
M S N+F ACA+I L H IY T+A++ + +EDNS LE LR + I HPK + H
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 67 ----PPSVILIEPKVNFGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGM 126
P + + P + G+L K +R PPSG SQ TS+ PP+P +IL+KES V FG+
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFGI 120
Query: 127 LPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDY 186
LPKG RIPPSGPS+RTSD PPP + +F KESRI +GILPKGVRIPPS PS+R SDY
Sbjct: 121 LPKGVRIPPSGPSRRTSD---PPPPLSNFHSIKESRIKYGILPKGVRIPPSGPSKRNSDY 180
Query: 187 PSPPP---HVP 190
PPP H P
Sbjct: 181 YPPPPMHLHAP 187
BLAST of Spg013184 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 3.8e-39
Identity = 99/188 (52.66%), Postives = 123/188 (65.43%), Query Frame = 0
Query: 7 MASNNCNVFLGACAIIVLRFHLTIYQTDARKILIANEDNSILERELRDNFIKHPKG-IHI 66
M S + N+ CAI++L H IYQT+ R + EDNS+ E EL+ N I HPK IH
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 67 PPSVILIEPKVN----FGMLPKSVRIPPSGPSQRTSDYLPPTPRAPSVILNKESKVEFGM 126
+ +P+ + FG+ K VRIPPSGPSQR+SD +P +PS+IL KES++ FG+
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSD----SPPSPSMILPKESRINFGI 120
Query: 127 LPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVRIPPSRPSQRTSDY 186
LPKG+RIPPSGPSQR SD P P PS L K S + FG+LPKG IPPS PS+RTSD
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSDN 180
Query: 187 PSPPPHVP 190
P PPPH P
Sbjct: 181 PPPPPHSP 180
BLAST of Spg013184 vs. ExPASy TrEMBL
Match:
A0A438DWZ1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 80/173 (46.24%), Postives = 88/173 (50.87%), Query Frame = 0
Query: 55 NFIKHPKGIHIPPS--------------VILIEPKVNFGMLPKSVRIPPSGPSQRTSDYL 114
NF+ PKG IPPS P + FGMLPK V IPPSGPSQRTSD
Sbjct: 37 NFVMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGVPIPPSGPSQRTSD-- 96
Query: 115 PPTPRAPSVILNKESKVEFGMLPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINF 174
PP P P + S FGMLPKG IPPSGPS R S+ P PP S + + F
Sbjct: 97 PPPPPQP---FARASVFRFGMLPKGDPIPPSGPSHRGSETPPPP-----HSFARGPTLRF 156
Query: 175 GILPKGVRIPPSRPSQRTSDYPSPP-----------------PHVPPSGGSGR 197
G+LPKG IPPS PSQRTSD P PP +PPSG S R
Sbjct: 157 GMLPKGDPIPPSGPSQRTSDPPPPPQPFARASVFRFGMLPKGDPIPPSGPSHR 199
BLAST of Spg013184 vs. ExPASy TrEMBL
Match:
A0A6A5P9E6 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00004179 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21
Identity = 68/138 (49.28%), Postives = 81/138 (58.70%), Query Frame = 0
Query: 61 KGIHIPPSV------------ILIEPKVNFGMLPKSVRIPPSGPSQRTSDYLPPTPRAPS 120
KG+ PPSV I +N+GMLPK V +PPSGPS +TSD P P P
Sbjct: 48 KGLPAPPSVPSKKTSLPPNSDIETFSNINYGMLPKGVPVPPSGPSNKTSD---PPPPPPK 107
Query: 121 VILNKESKVEFGMLPKGARIPPSGPSQRTSDYPAPPPSVPSFSLKKESRINFGILPKGVR 180
+ S + FGMLPKG R PPSGPS +TSD PPP P + ++ S INFG+LPKG
Sbjct: 108 YDIETFSNINFGMLPKG-RTPPSGPSNKTSD---PPPPPPKYDIETFSNINFGMLPKGT- 167
Query: 181 IPPSRPSQRTSDYPSPPP 187
PPS S +TSD P PPP
Sbjct: 168 TPPSGHSNKTSDPPPPPP 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6603169.1 | 3.3e-45 | 61.21 | hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022967687.1 | 4.7e-44 | 60.00 | actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima] | [more] |
XP_038882352.1 | 3.4e-42 | 54.40 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAA0040932.1 | 4.1e-40 | 52.36 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
KAA0043502.1 | 7.8e-39 | 52.66 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HRH7 | 2.3e-44 | 60.00 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
A0A5D3CGG1 | 2.0e-40 | 52.36 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3BP86 | 3.8e-39 | 52.66 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A438DWZ1 | 1.2e-21 | 46.24 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1 | [more] |
A0A6A5P9E6 | 6.1e-21 | 49.28 | Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00004179 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |