Spg012812 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012812
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	5'-phosphoribosylglycinamide transformylase
Location	scaffold1: 16267650 .. 16268355 (+)
RNA-Seq Expression	Spg012812
Synteny	Spg012812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTGAGTGCAAGTCTTGAAGGGGAAGTTTCAAAAACTGTGATTAGGAAGAAGAAACTTGCTGTCTTCGTCTCCGGTGGAGGCTCAAACTTCCGTTCAATACACGAGGCATCTCTTGAAGGATCAATCCATGGAGAAATCGTTGTTCTAGTCACTAACAAAAGCGATTGTGGTGGTGCAGAATATGCAAGAACTAACAACATTCCAGTTATTTTGTTTCCCAAAACAAAAGATGAACATGATGGCTTATCTGCTTCTTCTGATCTTGTAGCTACAACCCTTAGAAGTTTTGAGATAGATTTCATTCTTCTAGCTGGATACCTAAAACTTATACCATCAGAATTGATCCAAGCTTTTTCCAAATCTATAATCAATATACACCCATCACTTCTTCCAGCTTTTGGAGGCAAAGGGTATTATGGAATGAAGGTGCACAAGACAGTGATTGCCTCTGGAGCTCGATTGTCGGGTCCGACATTCATTTGGTCGATGAGCACTTTGACACTGTGGACGGATTCTTGCTCAAAGAGTAGTTCCTGTGCTTGCAAATGATGCAGCAGAGGATCTGGCAGGTAGAGTTCTTAAGGAGGAGCATCGTCTCTATGTCGAGGTAGTTGCAGCGTTGTGTGACGAACGGATCGTTTGGAGAGCAGACGGTGTTCCTCTCATTCGAGGCAAAGAAAATCCTGATGAATTGGTCTAA

mRNA sequence

ATGGTTGTGAGTGCAAGTCTTGAAGGGGAAGTTTCAAAAACTGTGATTAGGAAGAAGAAACTTGCTGTCTTCGTCTCCGGTGGAGGCTCAAACTTCCGTTCAATACACGAGGCATCTCTTGAAGGATCAATCCATGGAGAAATCGTTGTTCTAGTCACTAACAAAAGCGATTGTGGTGGTGCAGAATATGCAAGAACTAACAACATTCCAGTTATTTTGTTTCCCAAAACAAAAGATGAACATGATGGCTTATCTGCTTCTTCTGATCTTGTAGCTACAACCCTTAGAAGTTTTGAGATAGATTTCATTCTTCTAGCTGGATACCTAAAACTTATACCATCAGAATTGATCCAAGCTTTTTCCAAATCTATAATCAATATACACCCATCACTTCTTCCAGCTTTTGGAGGCAAAGGGTATTATGGAATGAAGGTGCACAAGACAGTGATTGCCTCTGGAGCTCGATTGTCGGCAGAGGATCTGGCAGGTAGAGTTCTTAAGGAGGAGCATCGTCTCTATGTCGAGGTAGTTGCAGCGTTGTGTGACGAACGGATCGTTTGGAGAGCAGACGGTGTTCCTCTCATTCGAGGCAAAGAAAATCCTGATGAATTGGTCTAA

Coding sequence (CDS)

ATGGTTGTGAGTGCAAGTCTTGAAGGGGAAGTTTCAAAAACTGTGATTAGGAAGAAGAAACTTGCTGTCTTCGTCTCCGGTGGAGGCTCAAACTTCCGTTCAATACACGAGGCATCTCTTGAAGGATCAATCCATGGAGAAATCGTTGTTCTAGTCACTAACAAAAGCGATTGTGGTGGTGCAGAATATGCAAGAACTAACAACATTCCAGTTATTTTGTTTCCCAAAACAAAAGATGAACATGATGGCTTATCTGCTTCTTCTGATCTTGTAGCTACAACCCTTAGAAGTTTTGAGATAGATTTCATTCTTCTAGCTGGATACCTAAAACTTATACCATCAGAATTGATCCAAGCTTTTTCCAAATCTATAATCAATATACACCCATCACTTCTTCCAGCTTTTGGAGGCAAAGGGTATTATGGAATGAAGGTGCACAAGACAGTGATTGCCTCTGGAGCTCGATTGTCGGCAGAGGATCTGGCAGGTAGAGTTCTTAAGGAGGAGCATCGTCTCTATGTCGAGGTAGTTGCAGCGTTGTGTGACGAACGGATCGTTTGGAGAGCAGACGGTGTTCCTCTCATTCGAGGCAAAGAAAATCCTGATGAATTGGTCTAA

Protein sequence

MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLSAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDELV

Homology

[Close]

BLAST of Spg012812 vs. NCBI nr
Match: XP_038896301.1 (phosphoribosylglycinamide formyltransferase, chloroplastic [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86
Identity = 177/233 (75.97%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           M+V+ASLEGEVS+TVIRKKKLAVFVSGGGSNFRSI+EASLEGSIHGEIVV+VTNKS CGG
Sbjct: 64  MIVNASLEGEVSRTVIRKKKLAVFVSGGGSNFRSINEASLEGSIHGEIVVVVTNKSGCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ +IPVILFPKTKDE  GLSA SDLVA TL SFEIDF+LLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKSIPVILFPKTKDEPHGLSA-SDLVA-TLGSFEIDFVLLAGYLKLIPPELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARL------------------------ 180
           SKSI+NIHPSLLPAFGGKGYYGMKVHK VI SGAR                         
Sbjct: 184 SKSIVNIHPSLLPAFGGKGYYGMKVHKAVIDSGARFSGATIHLVDEHFDTGRILAQRVVP 243

Query: 181 -----SAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDEL 205
                SAEDLA R+LKEEHRLYVEVVAALCDERI+WRADGVPLI+ KENP+EL
Sbjct: 244 VLANDSAEDLAARILKEEHRLYVEVVAALCDERIIWRADGVPLIQSKENPNEL 294

[Close]

BLAST of Spg012812 vs. NCBI nr
Match: XP_022954337.1 (phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 324.3 bits (830), Expect = 7.5e-85
Identity = 177/232 (76.29%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           +V SASLEG+VS+TVIRKKKLAVFVSGGGSNFRSIHEAS+EGSIHGEI V+VTNKS CGG
Sbjct: 64  IVASASLEGDVSRTVIRKKKLAVFVSGGGSNFRSIHEASVEGSIHGEIGVVVTNKSSCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPVILFPKTKDE  GLSA SDLVA TLRSFEIDFILLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKNIPVILFPKTKDEPHGLSA-SDLVA-TLRSFEIDFILLAGYLKLIPLELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLS----------------------- 180
           SKSIINIHPSLLPAFGGKGYYGMKVHK VIASGAR S                       
Sbjct: 184 SKSIINIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHLVDENFDTGKILAQRVVP 243

Query: 181 ------AEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                 AEDLA RVLKEEHRLYVEVVAALCD+RIVWR DGVPLI+ K+ P E
Sbjct: 244 VLANDAAEDLAARVLKEEHRLYVEVVAALCDDRIVWREDGVPLIQSKDKPGE 293

[Close]

BLAST of Spg012812 vs. NCBI nr
Match: XP_023547957.1 (phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 9.7e-85
Identity = 177/232 (76.29%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           +V SASLEG+VS+TVIRKKKLAVFVSGGGSNFRSIHEAS+EGSIHGEI V+VTNKS CGG
Sbjct: 64  IVASASLEGDVSRTVIRKKKLAVFVSGGGSNFRSIHEASVEGSIHGEIGVVVTNKSGCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPVILFPKTKDE  GLSA SDLVA TLRSFEIDFILLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKNIPVILFPKTKDEPHGLSA-SDLVA-TLRSFEIDFILLAGYLKLIPLELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLS----------------------- 180
           SKSIINIHPSLLPAFGGKGYYGMKVHK VIASGAR S                       
Sbjct: 184 SKSIINIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHLVDEHFDTGKILAQRVVP 243

Query: 181 ------AEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                 AEDLA RVLKEEHRLYVEVVAALCD+RIVWR DGVPLI+ K+ P E
Sbjct: 244 VLANDAAEDLAARVLKEEHRLYVEVVAALCDDRIVWREDGVPLIQSKDKPGE 293

[Close]

BLAST of Spg012812 vs. NCBI nr
Match: XP_022992348.1 (phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 2.8e-84
Identity = 175/232 (75.43%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           +V S+SLEG+VS+ VIRKKKLAVFVSGGGSNFRSIHEAS+EGSIHGEI V+VTNKS CGG
Sbjct: 64  VVASSSLEGDVSRIVIRKKKLAVFVSGGGSNFRSIHEASVEGSIHGEIGVVVTNKSGCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPVILFPKTKDE  GLSA SDLVA TLRSFEIDFILLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKNIPVILFPKTKDEPHGLSA-SDLVA-TLRSFEIDFILLAGYLKLIPLELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLS----------------------- 180
           SKSIINIHPSLLP+FGGKGYYGMKVHK VIASGAR S                       
Sbjct: 184 SKSIINIHPSLLPSFGGKGYYGMKVHKAVIASGARFSGPTIHLVDEHFDTGKILAQRVVP 243

Query: 181 ------AEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                 AEDLA RVLKEEH LYVEVVAALCD+RIVWR DGVPLI+ K+NPDE
Sbjct: 244 VLANDAAEDLAARVLKEEHHLYVEVVAALCDDRIVWREDGVPLIQSKDNPDE 293

[Close]

BLAST of Spg012812 vs. NCBI nr
Match: XP_008462305.1 (PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Cucumis melo] >XP_008462306.1 PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Cucumis melo] >XP_008462307.1 PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Cucumis melo] >XP_008462308.1 PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 2.8e-84
Identity = 173/231 (74.89%), Postives = 186/231 (80.52%), Query Frame = 0


Query: 2   VVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGA 61
           VVSASLEGEVSKTVI+KKKLAVFVSGGGSNFRSIHEASLEG +HGEIVV+VTNKS CGGA
Sbjct: 64  VVSASLEGEVSKTVIQKKKLAVFVSGGGSNFRSIHEASLEGLVHGEIVVVVTNKSSCGGA 123

Query: 62  EYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFS 121
           EYAR+ NIPV+LFPKTKDE  GLSA S+LVA TLR FEIDFILLAGYLKLIP ELIQA+S
Sbjct: 124 EYARSKNIPVLLFPKTKDEPHGLSA-SELVA-TLRHFEIDFILLAGYLKLIPLELIQAYS 183

Query: 122 KSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARL------------------------- 181
           K I+NIHPSLLPAFGGKGYYGMKVHK V+ SGAR                          
Sbjct: 184 KCILNIHPSLLPAFGGKGYYGMKVHKAVVNSGARFSGATIHLVDEHFDTGRILAQRVVPV 243

Query: 182 ----SAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
               SAEDLA RVLKEEHRLY EVVAALCDERI+WR+DGVPLI+ KENP+E
Sbjct: 244 LSNDSAEDLAARVLKEEHRLYAEVVAALCDERIIWRSDGVPLIQSKENPNE 292

[Close]

BLAST of Spg012812 vs. ExPASy Swiss-Prot
Match: P52423 (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna unguiculata OX=3917 GN=PUR3 PE=2 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 4.3e-75
Identity = 147/223 (65.92%), Postives = 168/223 (75.34%), Query Frame = 0


Query: 12  SKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPV 71
           ++  +R+KKLAVFVSGGGSNFRSIHEAS +GS+HG++ VLVTNKS+CGGA+YAR N IPV
Sbjct: 92  AQVTVRRKKLAVFVSGGGSNFRSIHEASKKGSLHGDVTVLVTNKSECGGAQYARNNGIPV 151

Query: 72  ILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSL 131
           ILFPK KDE  GLS   DLV  TLR FE+DF+LLAGYLKLIP ELI+AF +SI NIHPSL
Sbjct: 152 ILFPKAKDEPKGLS-PCDLV-DTLRKFEVDFVLLAGYLKLIPVELIRAFERSIFNIHPSL 211

Query: 132 LPAFGGKGYYGMKVHKTVIASGARLS-----------------------------AEDLA 191
           LPAFGGKGYYGMKVHK VIASGAR S                             AE+LA
Sbjct: 212 LPAFGGKGYYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVLANDTAEELA 271

Query: 192 GRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDELV 206
            RVL EEH+LYVEVV ALC+ERIVWR DGVPLI+ +ENP+E +
Sbjct: 272 ARVLNEEHQLYVEVVEALCEERIVWRKDGVPLIQSRENPNEFL 312

[Close]

BLAST of Spg012812 vs. ExPASy Swiss-Prot
Match: P52422 (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PUR3 PE=2 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-66
Identity = 130/217 (59.91%), Postives = 155/217 (71.43%), Query Frame = 0


Query: 17  RKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPVILFPK 76
           R+KKLAVFVSGGGSNFR IHE   +GS++G++V+LVTNK DCGGAEYAR+N IPV++FPK
Sbjct: 76  RRKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYARSNGIPVLVFPK 135

Query: 77  TKDE-HDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAF 136
            K E  DGLS S   +   LR + +DF+LLAGYLKLIP EL+QAF K I+NIHP+LLPAF
Sbjct: 136 AKREPSDGLSPSE--LVDVLRKYGVDFVLLAGYLKLIPVELVQAFPKRILNIHPALLPAF 195

Query: 137 GGKGYYGMKVHKTVIASGARLSA-----------------------------EDLAGRVL 196
           GGKG YG+KVHK V+ SGAR S                              E+LA RVL
Sbjct: 196 GGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRILAQSAVRVIANDTPEELAKRVL 255

Query: 197 KEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
            EEH+LYVEVV A+C+ERI WR DGVPLI+ K+NPDE
Sbjct: 256 HEEHKLYVEVVGAICEERIKWREDGVPLIQNKQNPDE 290

[Close]

BLAST of Spg012812 vs. ExPASy Swiss-Prot
Match: Q42805 (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Glycine max OX=3847 GN=PUR3 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-54
Identity = 120/221 (54.30%), Postives = 145/221 (65.61%), Query Frame = 0


Query: 12  SKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPV 71
           ++  +R+KKL VFVSGGG+NFR+IHEA+  GS+HG+++VLVTNKSDCGGAEYAR N IPV
Sbjct: 79  AQVTVRRKKLGVFVSGGGTNFRAIHEATKRGSLHGDVLVLVTNKSDCGGAEYARNNGIPV 138

Query: 72  ILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSL 131
           IL+  +KDE +G    SDLV  TLR FE+DFILLAGYL L       +  K  I      
Sbjct: 139 ILYHISKDESNG----SDLV-DTLRKFEVDFILLAGYLNLYQWN-DPSLQKIYIQHSSIT 198

Query: 132 LPAFGGKGYYGMKVHKTVIASGARLS-----------------------------AEDLA 191
             +F  +G +GMKVHK VIASGAR S                              E+LA
Sbjct: 199 SSSFWRQGIHGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVQANDTVEELA 258

Query: 192 GRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
            RVLKEEH+LYVEVV ALC+ER+VWR DGVPLI+ KENP+E
Sbjct: 259 ARVLKEEHQLYVEVVEALCEERVVWRQDGVPLIQSKENPNE 293

[Close]

BLAST of Spg012812 vs. ExPASy Swiss-Prot
Match: P43846 (Phosphoribosylglycinamide formyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=purN PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.3e-17
Identity = 62/207 (29.95%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 19  KKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPVILFPKTK 78
           KK+AV +SG G+N ++I +A   G I  +I  +++NK+D  G   A+   IP  +F + K
Sbjct: 2   KKIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNKADAYGLVRAKQAQIPQAVFLR-K 61

Query: 79  DEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAFGGK 138
           +  + L    D +   L+S  +D I+LAGY+K++  +  Q F+  I+NIHPSLLP + G 
Sbjct: 62  NFSNNLE-MDDAIGDYLQSLAVDLIVLAGYMKILTPKFTQRFAGKILNIHPSLLPKYAGL 121

Query: 139 GYY-----------GMKVH--KTVIASGARL-----------SAEDLAGRVLKEEHRLYV 198
             Y           G  VH     +  GA +           S E++  R  ++E+++Y 
Sbjct: 122 NTYQRAIEAGDNEHGTTVHFVNEEVDGGAIVLQAKVPIFPEDSIEEVEARTREQEYQIYP 181

Query: 199 EVVAALCDERIVWRADGVPLIRGKENP 202
            V+    + R+  + D +  + GK  P
Sbjct: 182 LVIKWFTEGRLRLK-DNLAYLDGKALP 205

[Close]

BLAST of Spg012812 vs. ExPASy Swiss-Prot
Match: P12040 (Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis (strain 168) OX=224308 GN=purN PE=3 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 5.0e-15
Identity = 53/136 (38.97%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 19  KKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPVILF-PKT 78
           KK AVF SG GSNF +I     E +      +LV +K      E A   +IP   F PK+
Sbjct: 2   KKFAVFASGNGSNFEAIVTRLKEENWDASAALLVCDKPQAKVIERAEAFHIPSFAFEPKS 61

Query: 79  KDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAFGG 138
              ++  +A    +   LR  E++ I LAGY++LI   L+QA+   IINIHPSLLPAF G
Sbjct: 62  ---YENKAAFEQAIIEQLRLHEVELIALAGYMRLIGDTLLQAYGGKIINIHPSLLPAFPG 121

Query: 139 KGYYGMKVHKTVIASG 154
               G      V  +G
Sbjct: 122 IDAVGQAFRAGVKVAG 134

[Close]

BLAST of Spg012812 vs. ExPASy TrEMBL
Match: A0A6J1GQR1 (phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456613 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.6e-85
Identity = 177/232 (76.29%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           +V SASLEG+VS+TVIRKKKLAVFVSGGGSNFRSIHEAS+EGSIHGEI V+VTNKS CGG
Sbjct: 64  IVASASLEGDVSRTVIRKKKLAVFVSGGGSNFRSIHEASVEGSIHGEIGVVVTNKSSCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPVILFPKTKDE  GLSA SDLVA TLRSFEIDFILLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKNIPVILFPKTKDEPHGLSA-SDLVA-TLRSFEIDFILLAGYLKLIPLELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLS----------------------- 180
           SKSIINIHPSLLPAFGGKGYYGMKVHK VIASGAR S                       
Sbjct: 184 SKSIINIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHLVDENFDTGKILAQRVVP 243

Query: 181 ------AEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                 AEDLA RVLKEEHRLYVEVVAALCD+RIVWR DGVPLI+ K+ P E
Sbjct: 244 VLANDAAEDLAARVLKEEHRLYVEVVAALCDDRIVWREDGVPLIQSKDKPGE 293

[Close]

BLAST of Spg012812 vs. ExPASy TrEMBL
Match: A0A1S3CGP8 (phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500692 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 173/231 (74.89%), Postives = 186/231 (80.52%), Query Frame = 0


Query: 2   VVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGA 61
           VVSASLEGEVSKTVI+KKKLAVFVSGGGSNFRSIHEASLEG +HGEIVV+VTNKS CGGA
Sbjct: 64  VVSASLEGEVSKTVIQKKKLAVFVSGGGSNFRSIHEASLEGLVHGEIVVVVTNKSSCGGA 123

Query: 62  EYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFS 121
           EYAR+ NIPV+LFPKTKDE  GLSA S+LVA TLR FEIDFILLAGYLKLIP ELIQA+S
Sbjct: 124 EYARSKNIPVLLFPKTKDEPHGLSA-SELVA-TLRHFEIDFILLAGYLKLIPLELIQAYS 183

Query: 122 KSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARL------------------------- 181
           K I+NIHPSLLPAFGGKGYYGMKVHK V+ SGAR                          
Sbjct: 184 KCILNIHPSLLPAFGGKGYYGMKVHKAVVNSGARFSGATIHLVDEHFDTGRILAQRVVPV 243

Query: 182 ----SAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
               SAEDLA RVLKEEHRLY EVVAALCDERI+WR+DGVPLI+ KENP+E
Sbjct: 244 LSNDSAEDLAARVLKEEHRLYAEVVAALCDERIIWRSDGVPLIQSKENPNE 292

[Close]

BLAST of Spg012812 vs. ExPASy TrEMBL
Match: A0A6J1JYY4 (phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488685 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 175/232 (75.43%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           +V S+SLEG+VS+ VIRKKKLAVFVSGGGSNFRSIHEAS+EGSIHGEI V+VTNKS CGG
Sbjct: 64  VVASSSLEGDVSRIVIRKKKLAVFVSGGGSNFRSIHEASVEGSIHGEIGVVVTNKSGCGG 123

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPVILFPKTKDE  GLSA SDLVA TLRSFEIDFILLAGYLKLIP ELIQA+
Sbjct: 124 AEYARSKNIPVILFPKTKDEPHGLSA-SDLVA-TLRSFEIDFILLAGYLKLIPLELIQAY 183

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARLS----------------------- 180
           SKSIINIHPSLLP+FGGKGYYGMKVHK VIASGAR S                       
Sbjct: 184 SKSIINIHPSLLPSFGGKGYYGMKVHKAVIASGARFSGPTIHLVDEHFDTGKILAQRVVP 243

Query: 181 ------AEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                 AEDLA RVLKEEH LYVEVVAALCD+RIVWR DGVPLI+ K+NPDE
Sbjct: 244 VLANDAAEDLAARVLKEEHHLYVEVVAALCDDRIVWREDGVPLIQSKDNPDE 293

[Close]

BLAST of Spg012812 vs. ExPASy TrEMBL
Match: A0A0A0K7R9 (Formyl_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450470 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 172/232 (74.14%), Postives = 189/232 (81.47%), Query Frame = 0


Query: 1   MVVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGG 60
           MVVSASL+GEVSKTVI+KKKLAVFVSGGGSNFRSIHEASLEGS+HGEIVV+VTNKS CGG
Sbjct: 62  MVVSASLKGEVSKTVIQKKKLAVFVSGGGSNFRSIHEASLEGSVHGEIVVVVTNKSGCGG 121

Query: 61  AEYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAF 120
           AEYAR+ NIPV+LFPKTKDE +GLSA S+LVA TL+ FEIDFILLAGYLKLIP ELIQA+
Sbjct: 122 AEYARSKNIPVVLFPKTKDEPNGLSA-SELVA-TLKHFEIDFILLAGYLKLIPLELIQAY 181

Query: 121 SKSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARL------------------------ 180
           SKSI+NIHPSLLPAFGGKGYYGMKVHK V+ SGAR                         
Sbjct: 182 SKSIVNIHPSLLPAFGGKGYYGMKVHKAVVNSGARFSGATIHLVDEHFDTGRILAQRVVP 241

Query: 181 -----SAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
                SAEDLA RVLKEEH LY EVVAALCDERI+WR+DGVPLI+ KE+P+E
Sbjct: 242 VLANDSAEDLAARVLKEEHGLYAEVVAALCDERIIWRSDGVPLIQSKEHPNE 291

[Close]

BLAST of Spg012812 vs. ExPASy TrEMBL
Match: A0A5D3BY35 (Phosphoribosylglycinamide formyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001250 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 171/231 (74.03%), Postives = 185/231 (80.09%), Query Frame = 0


Query: 2   VVSASLEGEVSKTVIRKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGA 61
           VVSASLEGEVSK+VI+KKKLAVFVSGGGSNFRSIHEASLEG +HGEIVV+VTNKS CGGA
Sbjct: 150 VVSASLEGEVSKSVIQKKKLAVFVSGGGSNFRSIHEASLEGLVHGEIVVVVTNKSSCGGA 209

Query: 62  EYARTNNIPVILFPKTKDEHDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFS 121
           EYAR+ NIPV+LFPKTKDE  GLSA S+LVA TLR F IDFILLAGYLKLIP ELIQA+S
Sbjct: 210 EYARSKNIPVLLFPKTKDEPHGLSA-SELVA-TLRHFGIDFILLAGYLKLIPLELIQAYS 269

Query: 122 KSIINIHPSLLPAFGGKGYYGMKVHKTVIASGARL------------------------- 181
           K I+NIHPSLLPAFGGKGYYGMKVHK V+ SGAR                          
Sbjct: 270 KCILNIHPSLLPAFGGKGYYGMKVHKAVVNSGARFSGATIHLVDEHFDTGRILAQRVVPV 329

Query: 182 ----SAEDLAGRVLKEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
               SAEDLA RVLKEEHRLY EVVAALCDERI+WR+DGVPLI+ KENP+E
Sbjct: 330 LANDSAEDLAARVLKEEHRLYAEVVAALCDERIIWRSDGVPLIQSKENPNE 378

[Close]

BLAST of Spg012812 vs. TAIR 10
Match: AT1G31220.1 (Formyl transferase )

HSP 1 Score: 253.1 bits (645), Expect = 2.0e-67
Identity = 130/217 (59.91%), Postives = 155/217 (71.43%), Query Frame = 0


Query: 17  RKKKLAVFVSGGGSNFRSIHEASLEGSIHGEIVVLVTNKSDCGGAEYARTNNIPVILFPK 76
           R+KKLAVFVSGGGSNFR IHE   +GS++G++V+LVTNK DCGGAEYAR+N IPV++FPK
Sbjct: 76  RRKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYARSNGIPVLVFPK 135

Query: 77  TKDE-HDGLSASSDLVATTLRSFEIDFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAF 136
            K E  DGLS S   +   LR + +DF+LLAGYLKLIP EL+QAF K I+NIHP+LLPAF
Sbjct: 136 AKREPSDGLSPSE--LVDVLRKYGVDFVLLAGYLKLIPVELVQAFPKRILNIHPALLPAF 195

Query: 137 GGKGYYGMKVHKTVIASGARLSA-----------------------------EDLAGRVL 196
           GGKG YG+KVHK V+ SGAR S                              E+LA RVL
Sbjct: 196 GGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRILAQSAVRVIANDTPEELAKRVL 255

Query: 197 KEEHRLYVEVVAALCDERIVWRADGVPLIRGKENPDE 204
            EEH+LYVEVV A+C+ERI WR DGVPLI+ K+NPDE
Sbjct: 256 HEEHKLYVEVVGAICEERIKWREDGVPLIQNKQNPDE 290

[Close]

BLAST of Spg012812 vs. TAIR 10
Match: AT4G17360.1 (Formyl transferase )

HSP 1 Score: 42.0 bits (97), Expect = 6.9e-04
Identity = 16/38 (42.11%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 101 DFILLAGYLKLIPSELIQAFSKSIINIHPSLLPAFGGK 139
           DF++LA Y++L+    ++ + K +INIH  LLP+F G+
Sbjct: 209 DFLVLARYMQLLSGNFLKGYGKDVINIHHGLLPSFKGR 246

The following BLAST results are available for this feature:

BLAST of Spg012812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896301.1	3.0e-86	75.97	phosphoribosylglycinamide formyltransferase, chloroplastic [Benincasa hispida]	[more]
XP_022954337.1	7.5e-85	76.29	phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita moschata]	[more]
XP_023547957.1	9.7e-85	76.29	phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita pepo subsp...	[more]
XP_022992348.1	2.8e-84	75.43	phosphoribosylglycinamide formyltransferase, chloroplastic [Cucurbita maxima]	[more]
XP_008462305.1	2.8e-84	74.89	PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Cucumis m...	[more]

BLAST of Spg012812 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52423	4.3e-75	65.92	Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna unguiculata ...	[more]
P52422	2.8e-66	59.91	Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Arabidopsis thalia...	[more]
Q42805	1.4e-54	54.30	Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Glycine max OX=384...	[more]
P43846	5.3e-17	29.95	Phosphoribosylglycinamide formyltransferase OS=Haemophilus influenzae (strain AT...	[more]
P12040	5.0e-15	38.97	Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis (strain 168) OX...	[more]

BLAST of Spg012812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQR1	3.6e-85	76.29	phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucurbita moschata...	[more]
A0A1S3CGP8	1.4e-84	74.89	phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A6J1JYY4	1.4e-84	75.43	phosphoribosylglycinamide formyltransferase, chloroplastic OS=Cucurbita maxima O...	[more]
A0A0A0K7R9	1.8e-84	74.14	Formyl_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450...	[more]
A0A5D3BY35	2.6e-83	74.03	Phosphoribosylglycinamide formyltransferase OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Spg012812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31220.1	2.0e-67	59.91	Formyl transferase	[more]
AT4G17360.1	6.9e-04	42.11	Formyl transferase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002376	Formyl transferase, N-terminal	PFAM	PF00551	Formyl_trans_N	coord: 19..155 e-value: 3.1E-33 score: 115.0
None	No IPR available	GENE3D	3.40.50.170		coord: 5..157 e-value: 1.6E-37 score: 130.8
None	No IPR available	PANTHER	PTHR43369	PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE	coord: 158..196 coord: 9..156
IPR036477	Formyl transferase, N-terminal domain superfamily	SUPERFAMILY	53328	Formyltransferase	coord: 19..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012812.1	Spg012812.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004644	phosphoribosylglycinamide formyltransferase activity
molecular_function	GO:0016742	hydroxymethyl-, formyl- and related transferase activity