Spg012676 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012676
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Epidermal patterning factor-like protein
Location	scaffold1: 7557108 .. 7558705 (-)
RNA-Seq Expression	Spg012676
Synteny	Spg012676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATGGTTGCCAAAAATCCTGTAGGCACTCTCTTGCTTGGGAAGAAGGAAGGATATGGATATGGCGTGATTAGGTGGGAGTGTTCAGAAGGAAATCAGAAGGAACTCACAAGAAAACCCAAATTCCAAAAGTTGAACAAACAACTAAAAAGCAGAAGAGAAAGAGAGAGACAAAAGGGAAACGAAAACGAAATCCCACTCTCAACACAGCTGCCATTGCGCTGCTCACAACCTGCTTATGGAAAAACTTTGCAGCATTTGGGAGCATTTGCAAATTTTCCTCTGATCCTTTTTGCTCTCTCTTTGTCTTTTGTTTCGGCGTTTTACTGTTCCTAATTACTTTACTTGTGAACTTCTCTTCTCTTCTCTGTCCTCAATTATTTTTTTTATTGCATTCCCTTTTCCCATGAATTTGTTAACTCTTCTTTTCTTCTTGGCTTATAGTTTTTGGGGCTCTTCTTTCGAGTTCTGAGGAGTTCTGCAGTTTTCGGTACTCTCTCTTCTTTCTTTTGGTCTCTGCAATTTTTTCTCTTTTCTTTTTCATTTGTCTTCCACGTTCCATCATCTCAAATATCTTTCCCGGACTAAGACAGATTCAGAGGAAATTATATTATATACACGTACGAGCAGAGTGTAGAGTGCAAAATCAGAAGCTAATCTCCTCCATTCTGATTTAACTCTCACTTCATTCGCCCACCCACTTCTTTTTTTTTTTTTCTCCTTTCTATTTGAATAGCTTGTTCTTTTGGTTTTATTTTTAACCTCCCCTTCTCCAGGGAGAATTCCCTGTCTCTTTCACACCCTTCTCTCTGAGAGAACAAAAAAGAAGATGGGGTGTGAGTGTAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTCCTTTTCTCTTTCTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGTAACTGGGTATCTTTTGAAACTTCAAAATACAGTCCAGAACCAGGCTAATATTCTTCAACTTCAATTTCAGTTTAACTGAATTCTTGCGAATCGTTTTTCTTTGCAGGCAGATCGATTTCAAAGAGTGGCAAGGTCAGTCCACAAGCCGGCCCTTCCCTCCCTTTCTGATTCATATACTCTTTAACTGTTTCTGAAAGCTTGATTGTCAAGAATAATTTTGGTTTTTGTTTTGGTGAATTGGGATAGACAGTGAGTGAAGATAAAGTGCTATTAAGAGGACAGATTGGGTCAAGGCCTCCAAAATGCGAGAGAAGATGCAGCTGGTGTGGACACTGTGAAGCCATTCAAGTTCCAGCAAACCCACAAAAATCAGCAACGAAAAACTCTTCAACGATGAAGAACATAGCATATGCTAGAGACGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAACTACTAGCTGATCTCGTCGACTATTCTATATAACACACCCCTTTCATTTTCTCTTTTTTTTTCTCTCTGTGTACATTATTAGTGATTACATGATTGTTTCTTCAACTTAACCACGCATCTGATGAAGGGTATTATGAATTGGGTTTGTTTCCAACATGCAAC

mRNA sequence

ATGGGGTGTGAGTGTAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTCCTTTTCTCTTTCTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGCAGATCGATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGCTATTAAGAGGACAGATTGGGTCAAGGCCTCCAAAATGCGAGAGAAGATGCAGCTGGTGTGGACACTGTGAAGCCATTCAAGTTCCAGCAAACCCACAAAAATCAGCAACGAAAAACTCTTCAACGATGAAGAACATAGCATATGCTAGAGACGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Coding sequence (CDS)

ATGGGGTGTGAGTGTAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTCCTTTTCTCTTTCTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGCAGATCGATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGCTATTAAGAGGACAGATTGGGTCAAGGCCTCCAAAATGCGAGAGAAGATGCAGCTGGTGTGGACACTGTGAAGCCATTCAAGTTCCAGCAAACCCACAAAAATCAGCAACGAAAAACTCTTCAACGATGAAGAACATAGCATATGCTAGAGACGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Protein sequence

MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP

Homology

[Close]

BLAST of Spg012676 vs. NCBI nr
Match: XP_023003267.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 118/127 (92.91%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGR RILCATV FLFLLILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 1   MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 60

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 120

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 121 GSLIFNP 122

[Close]

BLAST of Spg012676 vs. NCBI nr
Match: XP_023003266.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 118/127 (92.91%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGR RILCATV FLFLLILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 30  MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 89

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 90  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 149

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 150 GSLIFNP 151

[Close]

BLAST of Spg012676 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 241.9 bits (616), Expect = 3.0e-60
Identity = 117/127 (92.13%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGRSRILCATV FLF LILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 55  MGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 114

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSWKCKC
Sbjct: 115 IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSWKCKC 174

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 175 GSLIFNP 176

[Close]

BLAST of Spg012676 vs. NCBI nr
Match: XP_023518506.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 6.7e-60
Identity = 116/127 (91.34%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGRSRILCAT+ FLF LILASTQMRFMAEGRSI KSGKTVSEDKV+LRGQ
Sbjct: 1   MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQ 60

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 120

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 121 GSLIFNP 122

[Close]

BLAST of Spg012676 vs. NCBI nr
Match: XP_023518504.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 6.7e-60
Identity = 116/127 (91.34%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGRSRILCAT+ FLF LILASTQMRFMAEGRSI KSGKTVSEDKV+LRGQ
Sbjct: 31  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQ 90

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 91  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 150

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 151 GSLIFNP 152

[Close]

BLAST of Spg012676 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-23
Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 24  LFLLILASTQMRFMAEGR------SISKSGKTVSEDKVLLRGQIGSRPPKCER-RCSWCG 83
           L LLIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  CG
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 84  HCEAIQVPANPQ-------KSATKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 128
           HCEAIQVP NPQ        +++ +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of Spg012676 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09
Identity = 35/115 (30.43%), Postives = 52/115 (45.22%), Query Frame = 0


Query: 21  VPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQIGSRPPKCERRCSWCGHCEA 80
           +P + +L++      F+   +        + EDK     ++GS PP C  RC+ C  C A
Sbjct: 12  LPLILILLITPQVSSFLQPIQPPISPQVALIEDK----ARLGSTPPSCHNRCNNCHPCMA 71

Query: 81  IQVPANPQKSATKNSSTM--------KNIAYARDEASNYKPMSWKCKCGSLIFNP 128
           IQVP  P +S     +           ++    D+ SNYKPM WKC C    +NP
Sbjct: 72  IQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Spg012676 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 52  EDKVLLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNY 111
           E+ V  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +NY
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYANY 104

Query: 112 KPMSWKCKC 121
           +P  W+C C
Sbjct: 108 QPEGWRCHC 104

[Close]

BLAST of Spg012676 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.8e-05
Identity = 36/121 (29.75%), Postives = 48/121 (39.67%), Query Frame = 0


Query: 13  RSRILCATVPFLFLLILASTQMRFMAEGRSISK------SGKTVSEDKVLLRGQIGSRPP 72
           R R L A +    LL L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 73  KCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFN 128
            C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+ +F 
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSM----------------PLEYYPEAWRCKCGNKLFM 109

[Close]

BLAST of Spg012676 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.0e-61
Identity = 118/127 (92.91%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGR RILCATV FLFLLILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 30  MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 89

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 90  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 149

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 150 GSLIFNP 151

[Close]

BLAST of Spg012676 vs. ExPASy TrEMBL
Match: A0A6J1KLZ1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.0e-61
Identity = 118/127 (92.91%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGR RILCATV FLFLLILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 1   MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 60

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 120

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 121 GSLIFNP 122

[Close]

BLAST of Spg012676 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60
Identity = 117/127 (92.13%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           MGCECNNNGVIGRSRILCATV FLF LILASTQMRFMAEGRSISKSGKTVSEDKV+LRGQ
Sbjct: 55  MGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 114

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSWKCKC
Sbjct: 115 IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSWKCKC 174

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 175 GSLIFNP 176

[Close]

BLAST of Spg012676 vs. ExPASy TrEMBL
Match: A0A6J1BSQ3 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111005366 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-60
Identity = 111/127 (87.40%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MGCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQ 60
           M CECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGR + K G+TV E+KV+LRGQ
Sbjct: 1   MSCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRLVPKRGQTVGEEKVVLRGQ 60

Query: 61  IGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKC 120
           IGSRPPKCERRCSWCGHCEAIQVP NPQKSA  NSS   N+AYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC 120

Query: 121 GSLIFNP 128
           GSLIFNP
Sbjct: 121 GSLIFNP 127

[Close]

BLAST of Spg012676 vs. ExPASy TrEMBL
Match: A0A6J1GDI3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453017 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGCECNNNG-VIGRSRILCATVPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRG 60
           MGCECNNNG VIGRSRILCATV FL LLILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60

Query: 61  QIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWCGHCEAIQVPANPQKSATK SS +KNI YARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]

BLAST of Spg012676 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 24  LFLLILASTQMRFMAEGR------SISKSGKTVSEDKVLLRGQIGSRPPKCER-RCSWCG 83
           L LLIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  CG
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 84  HCEAIQVPANPQ-------KSATKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 128
           HCEAIQVP NPQ        +++ +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of Spg012676 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 35/115 (30.43%), Postives = 52/115 (45.22%), Query Frame = 0


Query: 21  VPFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVLLRGQIGSRPPKCERRCSWCGHCEA 80
           +P + +L++      F+   +        + EDK     ++GS PP C  RC+ C  C A
Sbjct: 12  LPLILILLITPQVSSFLQPIQPPISPQVALIEDK----ARLGSTPPSCHNRCNNCHPCMA 71

Query: 81  IQVPANPQKSATKNSSTM--------KNIAYARDEASNYKPMSWKCKCGSLIFNP 128
           IQVP  P +S     +           ++    D+ SNYKPM WKC C    +NP
Sbjct: 72  IQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Spg012676 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-08
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 52  EDKVLLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNY 111
           E+ V  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +NY
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYANY 104

Query: 112 KPMSWKCKC 121
           +P  W+C C
Sbjct: 108 QPEGWRCHC 104

[Close]

BLAST of Spg012676 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06
Identity = 36/121 (29.75%), Postives = 48/121 (39.67%), Query Frame = 0


Query: 13  RSRILCATVPFLFLLILASTQMRFMAEGRSISK------SGKTVSEDKVLLRGQIGSRPP 72
           R R L A +    LL L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 73  KCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFN 128
            C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+ +F 
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSM----------------PLEYYPEAWRCKCGNKLFM 109

[Close]

BLAST of Spg012676 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 32/122 (26.23%), Postives = 50/122 (40.98%), Query Frame = 0


Query: 16  ILCATVPFLFLLILASTQMRFMAE--------GRSISKSG--KTVSEDKVLLRGQIGSRP 75
           +L   + + FLL  +S+    +           + I++SG    + + K L  G  GS P
Sbjct: 4   VLPTLIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRL--GGPGSVP 63

Query: 76  PKCERRCSWCGHCEAIQVPANPQKSATKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 128
           P C  +C  C  C+A+ VP  P                       Y P +W+CKCG+ +F
Sbjct: 64  PMCRLKCGKCEPCKAVHVPIQP----------------GLIMPLEYYPEAWRCKCGNKLF 107

The following BLAST results are available for this feature:

BLAST of Spg012676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003267.1	1.0e-60	92.91	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima]	[more]
XP_023003266.1	1.0e-60	92.91	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima]	[more]
XP_022963149.1	3.0e-60	92.13	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]	[more]
XP_023518506.1	6.7e-60	91.34	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_023518504.1	6.7e-60	91.34	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of Spg012676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T068	2.3e-23	51.26	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	2.5e-09	30.43	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	4.0e-07	37.68	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	3.8e-05	29.75	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Spg012676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNP8	5.0e-61	92.91	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1KLZ1	5.0e-61	92.91	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HJ94	1.5e-60	92.13	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1BSQ3	7.2e-60	87.40	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GDI3	2.0e-57	87.50	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Spg012676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37810.1	1.7e-24	51.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G10310.1	1.8e-10	30.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	2.9e-08	37.68	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT4G14723.1	2.7e-06	29.75	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	1.1e-04	26.23	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 60..127 e-value: 5.8E-17 score: 61.4
None	No IPR available	PANTHER	PTHR33109:SF71	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2	coord: 6..127
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 6..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012676.1	Spg012676.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane