Spg011994 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCACTCCATGCCCATTTCCACTTTTCTCATCGCCATTCTCCTTCTCTCGCCAGCCTTATCCCTCGCCGCCGGCCGAAACGCCGCCGGCGGCTTCGATGGGATTTTCGGACCCGGTAGCGGATTTGACGACATACCCGGCTTTGGGAAGGGCTGGGACAAGGGCATCGTCGGCGGTGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGCATCATAAGAAACACTGTGTTCTGTAAGGAGAAGGGTCCTTGTTATAACAAGAAGGTGACTTGTCCGGCGAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTTTGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTATTGTTAG ATGAATCACTCCATGCCCATTTCCACTTTTCTCATCGCCATTCTCCTTCTCTCGCCAGCCTTATCCCTCGCCGCCGGCCGAAACGCCGCCGGCGGCTTCGATGGGATTTTCGGACCCGGTAGCGGATTTGACGACATACCCGGCTTTGGGAAGGGCTGGGACAAGGGCATCGTCGGCGGTGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGCATCATAAGAAACACTGTGTTCTGTAAGGAGAAGGGTCCTTGTTATAACAAGAAGGTGACTTGTCCGGCGAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTTTGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTATTGTTAG ATGAATCACTCCATGCCCATTTCCACTTTTCTCATCGCCATTCTCCTTCTCTCGCCAGCCTTATCCCTCGCCGCCGGCCGAAACGCCGCCGGCGGCTTCGATGGGATTTTCGGACCCGGTAGCGGATTTGACGACATACCCGGCTTTGGGAAGGGCTGGGACAAGGGCATCGTCGGCGGTGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGCATCATAAGAAACACTGTGTTCTGTAAGGAGAAGGGTCCTTGTTATAACAAGAAGGTGACTTGTCCGGCGAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTTTGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTATTGTTAG MNHSMPISTFLIAILLLSPALSLAAGRNAAGGFDGIFGPGSGFDDIPGFGKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVFCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC Homology
BLAST of Spg011994 vs. NCBI nr
Match: XP_022926656.1 (neuropeptide-like protein 31 [Cucurbita moschata] >KAG6594623.1 hypothetical protein SDJN03_11176, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026592.1 hypothetical protein SDJN02_10594, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244.6 bits (623), Expect = 4.9e-61 Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Spg011994 vs. NCBI nr
Match: XP_023517828.1 (cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.7 bits (613), Expect = 7.1e-60 Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 0
BLAST of Spg011994 vs. NCBI nr
Match: XP_023003427.1 (eggshell protein-like [Cucurbita maxima]) HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58 Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0
BLAST of Spg011994 vs. NCBI nr
Match: XP_004134728.1 (ctenidin-3 [Cucumis sativus] >KGN49190.1 hypothetical protein Csa_003176 [Cucumis sativus]) HSP 1 Score: 231.1 bits (588), Expect = 5.6e-57 Identity = 114/134 (85.07%), Postives = 122/134 (91.04%), Query Frame = 0
BLAST of Spg011994 vs. NCBI nr
Match: XP_008439905.1 (PREDICTED: ctenidin-3-like [Cucumis melo] >KAA0052719.1 ctenidin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 229.2 bits (583), Expect = 2.1e-56 Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0
BLAST of Spg011994 vs. ExPASy TrEMBL
Match: A0A6J1EFI3 (neuropeptide-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111433724 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.4e-61 Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Spg011994 vs. ExPASy TrEMBL
Match: A0A6J1KMH9 (eggshell protein-like OS=Cucurbita maxima OX=3661 GN=LOC111497041 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.0e-59 Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0
BLAST of Spg011994 vs. ExPASy TrEMBL
Match: A0A0A0KHJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516980 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57 Identity = 114/134 (85.07%), Postives = 122/134 (91.04%), Query Frame = 0
BLAST of Spg011994 vs. ExPASy TrEMBL
Match: A0A5A7UGS4 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003320 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56 Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0
BLAST of Spg011994 vs. ExPASy TrEMBL
Match: A0A1S3AZW7 (ctenidin-3-like OS=Cucumis melo OX=3656 GN=LOC103484551 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56 Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0
BLAST of Spg011994 vs. TAIR 10
Match: AT4G21620.1 (glycine-rich protein ) HSP 1 Score: 151.0 bits (380), Expect = 6.9e-37 Identity = 80/131 (61.07%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Spg011994 vs. TAIR 10
Match: AT4G21620.2 (glycine-rich protein ) HSP 1 Score: 114.4 bits (285), Expect = 7.1e-26 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Spg011994 vs. TAIR 10
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 4.9e-19 Identity = 55/100 (55.00%), Postives = 62/100 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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