Spg011873 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011873
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	dof zinc finger protein DOF5.6-like
Location	scaffold1: 2962120 .. 2964261 (-)
RNA-Seq Expression	Spg011873
Synteny	Spg011873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGTCTAATCACAAAGCCCTTACAACACAAGGGTCACCCTCCCACTCCAAATATAATAGGATATATGTCCCAAATCCAATTTGTCAAAATGATGTCAGAAAAAAAAATATTAATAAATTAAAATACTGAAAAACAGAGAGAAGATTTAGCACAACTCAAACACAAACAAAAGCTTCTCACAAACAGAAACCTTTCGAAAGAGAAAGAGAATAATTATCTATCCCACCACACATCCGTCAACCACCGCGAACGCCGCCCCCGCCGCCGCCGTTGATCGCCGTCAGAATCCAACATATCCTTTTATATGTAGCAAAATTAAATCTTTTGCGTTATGGTTTAAATTTCTTTGATGATATTTTGGCTGGATTTGCCAGGTTCAACGCTTTGCCTTCTTATGAATCATTTCTTGAATTTTATTTTGTTCAGCTTCAGCGCATCAAAAGCCATAAAACTGGGGTTTTTCAGACCATCATTTTTTTTCACCTCAATAATGCATGCCGTACTTCTGCCTCTCTGAAACTCAATATCATTTTTTCAAAATTTCAGCATCTTTTTTCTCTCCTCACAGATTAAAATTCAAAATCCCATCTTCTGTTAGAAAAAAACCTAGCTGACTCATGCACAGAAGTGGCAAGTTTTTGCTTTGAATCTCTTGAAGCTAAAACGCTCGATCTCCATTTATTTCTCTAAGACCCCCCCCAAAAAAAAAAAACACCCTTTTCTTTTGTTCTCTTTATATGCTCAAATTAAACCAAAGGAAATCGATTGGTTAAGAGATGCAGCGGCGGGATGATCAAATAATGAAGGCTCAGTATCAAGATCGGAGATTGAAGCCTCTACAAGTGCAAAGTCAAGTCCAGCCACAGCCTCAGAAATGCCCTCGTTGTGATTCTCTCAACACCAAGTTTTGTTATTACAATAATTACAGTTTGTCTCAGCCTCGTTATCTTTGCAAGACCTGTAGAAGGTACTGGACTCAAGGTGGTACTCTTCGAAACGTTCCGGTCGGCGGCGGCTGCCGGAAGGGTAAACGAGCTAAACAATCTTCTCACTCATCCGACAACACAAAGTCACAACCGTTGCCGCCGCTACCGCCGCCGCAGATAGTCCAGTCGAGTTTAACGACAACTCCGCAACATGTAATCTTCTCGGGTACTCCCGTCATCACCACGTCGTCGTTTTTCAATCCTGGTGAGTAACAGGAGCGGAGTCAGAAATTTTCATAAAAAGATCGAAATTTGATCTTAATTTAGAAGAGACAAATTAGAGGTTAAAATCTTGGTTCTTCAATATGTGTATTTTTTTAATCGATTGCTCCCTCCTTTTCTTTGTTCGTTGGAATCGTTGAATCAAAAAGATCAAATTTTTATGAATGGTTTTGATGCAGTTGGGGATTTGGGGTCATCTTCGAGCTGGGTTAATTCGTTTGGATCATCACAAGGGCAGTGTCAAATTCAAGCACCAGAAATAATCTACGAAATGATTGATCAATCATCGGGAAAGGCCGCCGTGGGTTCATCTTCTCCAGCGGGGTGGCCAGAAAGCTACATCAACAATTCTATTTCTAACCCCATGGCCGCCGCCGGAGACTCCATCGTCTGGACCGCCGGAAACAGCAACGTAGCCGCTGCTGACGCCTCCGGCAGCAACCCCACCAACAATAGTGCCGCAATTAGCCAGTGGCCTGATTATATGCCGGGATTTTGTGCGCCTCCATGACATGATTTAAAGCAGCAGATACCACAGATCACAAATCTGAGGAATTCGATTCTTTTTTTCCTTCACAAAAACAGCTGAAAAGACCATACCTTTGATATCATAATATATATGAATATGCTTTGACTCATTCAGTTGGTTTGAAGTGAGTTAGAGTAGGGCAGATGCCAGATCTTGATTGAAAATCCAGCCGACGAATTTGAAGGTAATTTGATGAGATAATGTTGTAAGAACAAGAGCTAGGTAGCTCTAGCTCCAGCTACAACATTGCCATTGTTGTAATGTGTATTAATATAGGGAAAGAAAATCTTAGTTGGGTTAGGTTTGTTTTTCTTCAACACTTTTTGCTTTGATTAAAGAGAGTAATTATGGTATGTATGGTTTTTTGAGCACTTTCGTTTGAACTTTGAGAGCCCTTTTTAAC

mRNA sequence

ATGCAGCGGCGGGATGATCAAATAATGAAGGCTCAGTATCAAGATCGGAGATTGAAGCCTCTACAAGTGCAAAGTCAAGTCCAGCCACAGCCTCAGAAATGCCCTCGTTGTGATTCTCTCAACACCAAGTTTTGTTATTACAATAATTACAGTTTGTCTCAGCCTCGTTATCTTTGCAAGACCTGTAGAAGGTACTGGACTCAAGGTGGTACTCTTCGAAACGTTCCGGTCGGCGGCGGCTGCCGGAAGGGTAAACGAGCTAAACAATCTTCTCACTCATCCGACAACACAAAGTCACAACCGTTGCCGCCGCTACCGCCGCCGCAGATAGTCCAGTCGAGTTTAACGACAACTCCGCAACATGTAATCTTCTCGGGTACTCCCGTCATCACCACGTCGTCGTTTTTCAATCCTGTTGGGGATTTGGGGTCATCTTCGAGCTGGGTTAATTCGTTTGGATCATCACAAGGGCAGTGTCAAATTCAAGCACCAGAAATAATCTACGAAATGATTGATCAATCATCGGGAAAGGCCGCCGTGGGTTCATCTTCTCCAGCGGGGTGGCCAGAAAGCTACATCAACAATTCTATTTCTAACCCCATGGCCGCCGCCGGAGACTCCATCGTCTGGACCGCCGGAAACAGCAACGTAGCCGCTGCTGACGCCTCCGGCAGCAACCCCACCAACAATAGTGCCGCAATTAGCCAGTGGCCTGATTATATGCCGGGATTTTGTGCGCCTCCATGA

Coding sequence (CDS)

ATGCAGCGGCGGGATGATCAAATAATGAAGGCTCAGTATCAAGATCGGAGATTGAAGCCTCTACAAGTGCAAAGTCAAGTCCAGCCACAGCCTCAGAAATGCCCTCGTTGTGATTCTCTCAACACCAAGTTTTGTTATTACAATAATTACAGTTTGTCTCAGCCTCGTTATCTTTGCAAGACCTGTAGAAGGTACTGGACTCAAGGTGGTACTCTTCGAAACGTTCCGGTCGGCGGCGGCTGCCGGAAGGGTAAACGAGCTAAACAATCTTCTCACTCATCCGACAACACAAAGTCACAACCGTTGCCGCCGCTACCGCCGCCGCAGATAGTCCAGTCGAGTTTAACGACAACTCCGCAACATGTAATCTTCTCGGGTACTCCCGTCATCACCACGTCGTCGTTTTTCAATCCTGTTGGGGATTTGGGGTCATCTTCGAGCTGGGTTAATTCGTTTGGATCATCACAAGGGCAGTGTCAAATTCAAGCACCAGAAATAATCTACGAAATGATTGATCAATCATCGGGAAAGGCCGCCGTGGGTTCATCTTCTCCAGCGGGGTGGCCAGAAAGCTACATCAACAATTCTATTTCTAACCCCATGGCCGCCGCCGGAGACTCCATCGTCTGGACCGCCGGAAACAGCAACGTAGCCGCTGCTGACGCCTCCGGCAGCAACCCCACCAACAATAGTGCCGCAATTAGCCAGTGGCCTGATTATATGCCGGGATTTTGTGCGCCTCCATGA

Protein sequence

MQRRDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTPQHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAAVGSSSPAGWPESYINNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPDYMPGFCAPP

Homology

[Close]

BLAST of Spg011873 vs. NCBI nr
Match: XP_023003351.1 (dof zinc finger protein DOF5.6-like [Cucurbita maxima])

HSP 1 Score: 379.0 bits (972), Expect = 3.1e-101
Identity = 197/249 (79.12%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWTQGGTLRNVPVGGGCRKGKR KQSSHSSDN+ SQPLP LP PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PE+IYE++DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPD 240
           V SSS AGW ESYINN ISNPMAAAG+++VWT  N+N      +  NPTNNS  I+QWPD
Sbjct: 181 VSSSSQAGWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPD 240

Query: 241 YMPGFCAPP 249
           YM GF  PP
Sbjct: 241 YMKGFDPPP 242

[Close]

BLAST of Spg011873 vs. NCBI nr
Match: KAG7026567.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100
Identity = 200/250 (80.00%), Postives = 210/250 (84.00%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWT GGTLRNVPVGGGCRKGKR KQSSHSSDN+ SQPLP LP PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PEIIYEM+DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPM-AAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWP 240
           V SSS AGW ESYINN ISNP+ AAAG++IVWT  N+N   A A+  NPTNNS  I+QWP
Sbjct: 181 VSSSSQAGWSESYINNYISNPIAAAAGENIVWTPNNNNNDTATAATGNPTNNSTTINQWP 240

Query: 241 DYMPGFCAPP 249
           DYM GF  PP
Sbjct: 241 DYMAGFDPPP 243

[Close]

BLAST of Spg011873 vs. NCBI nr
Match: XP_022926378.1 (dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371.7 bits (953), Expect = 4.9e-99
Identity = 200/251 (79.68%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWT GGTLRNVPVGGGCRKGKR KQSSHSSDN+ SQPLP LP PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PEIIYEM+DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPM-AAAGDSIVWTA-GNSNVAAADASGSNPTNNSAAISQW 240
           V SSS AGW ESYINN ISNP+ AAAG++IVWT   N+N   A A+  NPTNNS  I+QW
Sbjct: 181 VSSSSQAGWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQW 240

Query: 241 PDYMPGFCAPP 249
           PDYM GF  PP
Sbjct: 241 PDYMAGFDPPP 244

[Close]

BLAST of Spg011873 vs. NCBI nr
Match: XP_023517464.1 (dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-97
Identity = 193/249 (77.51%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWTQGGTLRNVPVGGGCRKGKR KQSSHSS+N+ SQPL     PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRPKQSSHSSNNSNSQPL-----PQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PEIIY+M+DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYDMMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPD 240
           V SSS AGW ESYINN ISNP+AAAG++I+WT  N+N   A     NPTN+S  I+QWPD
Sbjct: 181 VSSSSQAGWSESYINNYISNPIAAAGENIIWTPNNNNNDTATTIAGNPTNDSTTINQWPD 237

Query: 241 YMPGFCAPP 249
           YM GF  PP
Sbjct: 241 YMTGFDPPP 237

[Close]

BLAST of Spg011873 vs. NCBI nr
Match: XP_038882844.1 (dof zinc finger protein DOF1.4-like [Benincasa hispida])

HSP 1 Score: 360.9 bits (925), Expect = 8.7e-96
Identity = 189/240 (78.75%), Postives = 201/240 (83.75%), Query Frame = 0


Query: 12  QYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGT 71
           QYQDRRLK +QVQ QVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGT
Sbjct: 2   QYQDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 61

Query: 72  LRNVPVGGGCRKGKRAKQSSHSSDN-TKS-QPLPPLPPPQIVQSSLTTTPQHVIFSGTPV 131
           LRNVPVGGGCRKGKR KQSS SS+   KS QP P LPPP  +  + TTT QHVIFSGTPV
Sbjct: 62  LRNVPVGGGCRKGKRPKQSSQSSNTIVKSLQPSPSLPPPLPLSLTSTTTSQHVIFSGTPV 121

Query: 132 ITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAAVGSSS-PAGW 191
           IT  SFFNP GDL SSSSW+NSFGSS+GQCQIQ  EIIYEM+ QSSGKAAV SSS PAGW
Sbjct: 122 ITPPSFFNPGGDLLSSSSWINSFGSSEGQCQIQPQEIIYEMMGQSSGKAAVSSSSPPAGW 181

Query: 192 PESYINNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPDYMPGFCAPP 249
           PESYINNSISNPMAAAGD+IVW AGN+N AA     +  T N+A  +QWPDYMPGFC PP
Sbjct: 182 PESYINNSISNPMAAAGDAIVWPAGNNNTAAT----ATTTANNATTNQWPDYMPGFCPPP 237

[Close]

BLAST of Spg011873 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 16  RRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNV 75
           RRL+P          PQKCPRC+S +TKFCYYNNYSLSQPRY CKTCRRYWT+GGTLRN+
Sbjct: 63  RRLRP------PHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI 122

Query: 76  PVGGGCRKGKRAKQSSHSSDNTKSQPLP 104
           PVGGGCRK K+   SS+SS +T S   P
Sbjct: 123 PVGGGCRKNKK-PSSSNSSSSTSSGKKP 143

[Close]

BLAST of Spg011873 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 19  KPLQVQSQVQPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 78
           KP    +  +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT+GGTLRN
Sbjct: 38  KPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRN 97

Query: 79  VPVGGGCRKGKRAKQSSHSSDNTKSQP 102
           +PVGGGCRK KR+  S+  S  T  +P
Sbjct: 98  IPVGGGCRKNKRSTSSAARSLRTTPEP 124

[Close]

BLAST of Spg011873 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 15  DRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 74
           +  +K    + ++  + Q CPRC+S NTKFCYYNNYSLSQPRY CK+CRRYWT+GGTLRN
Sbjct: 31  EEEMKKKVSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRN 90

Query: 75  VPVGGGCRKGKRAKQSSHSSDN 97
           VPVGGGCR+ KR+  S+ S +N
Sbjct: 91  VPVGGGCRRNKRSSSSAFSKNN 112

[Close]

BLAST of Spg011873 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.4e-25
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 22  QVQSQVQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 81
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 16  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 82  CRKGKRAKQSSHSSDNTKS-----QPLPPLPPPQIVQSSLTTTPQHVIFSG 127
            RK KR K+ S ++  T S         P  P QI  S  ++   H +F G
Sbjct: 76  YRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQI--SHFSSMNHHPLFYG 124

[Close]

BLAST of Spg011873 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-25
Identity = 66/134 (49.25%), Postives = 81/134 (60.45%), Query Frame = 0


Query: 14  QDRRLKPLQVQSQVQPQPQ-----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQ 73
           Q R +  +    + +P+PQ     KCPRCDS NTKFCYYNNYS+SQPRY CK CRRYWT 
Sbjct: 37  QTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTH 96

Query: 74  GGTLRNVPVGGGCRKGKRAKQ---SSHSSDNTKSQPLPPLPPPQIVQSSLTTTPQHVIF- 133
           GGTLRNVP+GGGCRK K A +    SH+S ++ S    PL P     SS  +  +H++  
Sbjct: 97  GGTLRNVPIGGGCRKNKHASRFVLGSHTS-SSSSATYAPLSPSTNASSSNMSINKHMMMV 156

Query: 134 --SGTPVITTSSFF 137
                P  TT   F
Sbjct: 157 PNMTMPTPTTMGLF 169

[Close]

BLAST of Spg011873 vs. ExPASy TrEMBL
Match: A0A6J1KP01 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.5e-101
Identity = 197/249 (79.12%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWTQGGTLRNVPVGGGCRKGKR KQSSHSSDN+ SQPLP LP PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PE+IYE++DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPD 240
           V SSS AGW ESYINN ISNPMAAAG+++VWT  N+N      +  NPTNNS  I+QWPD
Sbjct: 181 VSSSSQAGWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPD 240

Query: 241 YMPGFCAPP 249
           YM GF  PP
Sbjct: 241 YMKGFDPPP 242

[Close]

BLAST of Spg011873 vs. ExPASy TrEMBL
Match: A0A6J1EHW0 (dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111433543 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.4e-99
Identity = 200/251 (79.68%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 1   MQR-RDDQIMKAQYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60
           MQR RDD       QDRRLK LQ Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC
Sbjct: 1   MQRGRDD-------QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLC 60

Query: 61  KTCRRYWTQGGTLRNVPVGGGCRKGKRAKQSSHSSDNTKSQPLPPLPPPQIVQSSLTTTP 120
           KTCRRYWT GGTLRNVPVGGGCRKGKR KQSSHSSDN+ SQPLP LP PQIVQSSLTTTP
Sbjct: 61  KTCRRYWTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTP 120

Query: 121 QHVIFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAA 180
             VIFSGTPVIT SSFFNPVG+LGSSSSWVNSFGSSQGQ  IQ PEIIYEM+DQSSGKAA
Sbjct: 121 PPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAA 180

Query: 181 VGSSSPAGWPESYINNSISNPM-AAAGDSIVWTA-GNSNVAAADASGSNPTNNSAAISQW 240
           V SSS AGW ESYINN ISNP+ AAAG++IVWT   N+N   A A+  NPTNNS  I+QW
Sbjct: 181 VSSSSQAGWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQW 240

Query: 241 PDYMPGFCAPP 249
           PDYM GF  PP
Sbjct: 241 PDYMAGFDPPP 244

[Close]

BLAST of Spg011873 vs. ExPASy TrEMBL
Match: A0A5A7UGN7 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007560 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.6e-87
Identity = 181/248 (72.98%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 12  QYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGT 71
           QYQDRRLK +QVQ QVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGT
Sbjct: 2   QYQDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 61

Query: 72  LRNVPVGGGCRKGKRAKQSSHSSDNTKS--------QPLPPLPPPQIVQSSL-TTTPQHV 131
           LRNVPVGGGCRKGKR KQSS SS+N  S           P LPPPQIV  SL TTT QHV
Sbjct: 62  LRNVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHV 121

Query: 132 IFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAAVGS 191
           IFSGTPVIT  SFFN  G+L SSSSW+NSFGSS      Q PEIIY+M+DQSSGKA   S
Sbjct: 122 IFSGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANS 181

Query: 192 SSP-AGWPESYI-NNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPDY 249
           SSP AGW ESYI NNSISNPMAA GD++VW AG +N   A A+    T N+A I+QWPDY
Sbjct: 182 SSPAAGWSESYINNNSISNPMAATGDAVVWPAGENNATLAAAT----TTNNATINQWPDY 240

[Close]

BLAST of Spg011873 vs. ExPASy TrEMBL
Match: A0A1S3B0F1 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-86
Identity = 180/248 (72.58%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 12  QYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGT 71
           QYQDRRLK +QVQ QVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGT
Sbjct: 2   QYQDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 61

Query: 72  LRNVPVGGGCRKGKRAKQSSHSSDNTKS--------QPLPPLPPPQIVQSSL-TTTPQHV 131
           LRNVPVGGGCRKGKR KQSS SS+N  S           P LPPPQIV  SL TTT QHV
Sbjct: 62  LRNVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHV 121

Query: 132 IFSGTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAAVGS 191
           IFSGTPVIT  SFFN  G+L SSSSW+NSFGSS      Q PEIIY+M+DQSSGKA   S
Sbjct: 122 IFSGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANS 181

Query: 192 SSP-AGWPESYI-NNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPDY 249
           SSP AGW ESYI NNSISNPMAA GD++VW AG +N   A A+    + N+A I+QWPDY
Sbjct: 182 SSPAAGWSESYINNNSISNPMAATGDAVVWPAGENNATLAAAT----STNNATINQWPDY 240

[Close]

BLAST of Spg011873 vs. ExPASy TrEMBL
Match: A0A0A0KLH8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.9e-86
Identity = 178/245 (72.65%), Postives = 194/245 (79.18%), Query Frame = 0


Query: 12  QYQDRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGT 71
           QYQDRRLK +QVQ QVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGT
Sbjct: 2   QYQDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 61

Query: 72  LRNVPVGGGCRKGKRAKQSSHSSDNTKSQPL-----PPLPPPQIVQSSL-TTTPQHVIFS 131
           LRNVPVGGGCRKGKR KQ S SS+N+  +PL      PLPPPQIV  SL TTT QHVI+S
Sbjct: 62  LRNVPVGGGCRKGKRLKQPSQSSNNSSVKPLVQTSASPLPPPQIVPLSLSTTTSQHVIYS 121

Query: 132 GTPVITTSSFFNPVGDLGSSSSWVNSFGSSQGQCQIQAPEIIYEMIDQSSGKAAVGSSSP 191
           GTPVIT  SFFN  G+L SSSSW++SFGSS      Q PEIIY+M+DQSSGKA   SSSP
Sbjct: 122 GTPVITPPSFFNSGGELLSSSSWISSFGSSS-----QGPEIIYDMMDQSSGKADANSSSP 181

Query: 192 -AGWPESYI-NNSISNPMAAAGDSIVWTAGNSNVAAADASGSNPTNNSAAISQWPDYMPG 249
            AGW ESYI NNSISNP+AA GD++VW AG +N A   A+    T N A I+QWPDYMPG
Sbjct: 182 AAGWSESYINNNSISNPIAATGDAVVWPAGENNNATLAAA---TTTNIATINQWPDYMPG 238

[Close]

BLAST of Spg011873 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-28
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 16  RRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNV 75
           RRL+P          PQKCPRC+S +TKFCYYNNYSLSQPRY CKTCRRYWT+GGTLRN+
Sbjct: 63  RRLRP------PHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI 122

Query: 76  PVGGGCRKGKRAKQSSHSSDNTKSQPLP 104
           PVGGGCRK K+   SS+SS +T S   P
Sbjct: 123 PVGGGCRKNKK-PSSSNSSSSTSSGKKP 143

[Close]

BLAST of Spg011873 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-27
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 19  KPLQVQSQVQPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 78
           KP    +  +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT+GGTLRN
Sbjct: 38  KPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRN 97

Query: 79  VPVGGGCRKGKRAKQSSHSSDNTKSQP 102
           +PVGGGCRK KR+  S+  S  T  +P
Sbjct: 98  IPVGGGCRKNKRSTSSAARSLRTTPEP 124

[Close]

BLAST of Spg011873 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 15  DRRLKPLQVQSQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 74
           +  +K    + ++  + Q CPRC+S NTKFCYYNNYSLSQPRY CK+CRRYWT+GGTLRN
Sbjct: 31  EEEMKKKVSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRN 90

Query: 75  VPVGGGCRKGKRAKQSSHSSDN 97
           VPVGGGCR+ KR+  S+ S +N
Sbjct: 91  VPVGGGCRRNKRSSSSAFSKNN 112

[Close]

BLAST of Spg011873 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 22  QVQSQVQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 81
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 16  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 82  CRKGKRAKQSSHSSDNTKS-----QPLPPLPPPQIVQSSLTTTPQHVIFSG 127
            RK KR K+ S ++  T S         P  P QI  S  ++   H +F G
Sbjct: 76  YRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQI--SHFSSMNHHPLFYG 124

[Close]

BLAST of Spg011873 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 22  QVQSQVQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 81
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 30  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 89

Query: 82  CRKGKRAKQSSHSSDNTKS-----QPLPPLPPPQIVQSSLTTTPQHVIFSG 127
            RK KR K+ S ++  T S         P  P QI  S  ++   H +F G
Sbjct: 90  YRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQI--SHFSSMNHHPLFYG 138

The following BLAST results are available for this feature:

BLAST of Spg011873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003351.1	3.1e-101	79.12	dof zinc finger protein DOF5.6-like [Cucurbita maxima]	[more]
KAG7026567.1	1.2e-100	80.00	Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022926378.1	4.9e-99	79.68	dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc ...	[more]
XP_023517464.1	2.1e-97	77.51	dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo]	[more]
XP_038882844.1	8.7e-96	78.75	dof zinc finger protein DOF1.4-like [Benincasa hispida]	[more]

BLAST of Spg011873 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM03	1.2e-26	67.05	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]
Q84TE9	3.4e-26	63.22	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q8LE43	1.7e-25	62.20	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]
Q9FZA4	6.4e-25	57.66	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
O24463	8.3e-25	49.25	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]

BLAST of Spg011873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP01	1.5e-101	79.12	dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 ...	[more]
A0A6J1EHW0	2.4e-99	79.68	dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC11143354...	[more]
A0A5A7UGN7	3.6e-87	72.98	Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B0F1	1.0e-86	72.58	dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4...	[more]
A0A0A0KLH8	3.9e-86	72.65	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE...	[more]

BLAST of Spg011873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62940.1	8.3e-28	67.05	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	2.4e-27	63.22	TARGET OF MONOPTEROS 6	[more]
AT2G28510.1	1.2e-26	62.20	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.1	4.5e-26	57.66	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	4.5e-26	57.66	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 31..86 e-value: 1.4E-32 score: 111.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 34..70
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 32..86 score: 28.388029
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..112
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 9..153
None	No IPR available	PANTHER	PTHR31992:SF108	DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1	coord: 9..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011873.1	Spg011873.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding