Spg011776 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTCGGGAAAGACCTTAATTGTTGTAGTGATAGATGCCTCAACTCGAAGAGTTGCATCTTGTCAGTAAAGATTGAAGGACAAAATAAAAATTTATTAGAATTCTACGAACAAAGGAGGGAAAAAATATGATATTTACATCCATTTTAAGATGTGATATTTTAAATAAAATTTTGATGACTTTGAACAATTTCTTAACTTTTTTTTGTTGGACCACATGATTTTTACGTTTTCTTTGTTCCTATATTTAGATGTACATCAGATGAAAGGAAAAAAAATACATTTTTATTTCAATTCTAAGGTTTTTTTTAATAATTAAAAATAGTTAAACAAATATATAATTTATAATAGGGAGAAAGAAAACTTATAATGTATTGAAATTCTTTAGTGTAATTTTAAATAATTAATTTTGTTGAAAATATAACTGAATCCAAATGGGTACAAAATGTAAAATATTTGAGATTTGGAAACACAGAGTAATCCTTCTAAAATTATATTTTCCAGAAGGAATTTACGAAATAACATTTGATGGATATATATATAACATTTATTGACATAAGAAAAATAAAAAATGATATACAATAAAACCTCTTCGTCGAAAAAAATGAGTTTTTGAATTCTCAAACTTCATTTTGACACAATTCAATGTTTCCTTATGAAGAACATAAACTTTTAATTTCCATTCTTTTTGGAAAACTTTGAATTCTTTGATAAAAGGAGAACGTTTGCTATAATGACATGATATTTTGATAGAAATAAATAAAAAAATGTATGTATTGACAATCATGTTTCTTTCTTTTTATACATGGATCATACCCATAGGATGCATCAATTCATATGTAACCACCTAAGAGTCGCACCTCGTCGGCACCAGTTACACCCATACAAAGTGATACATTTGAAGAGTCGTGTCCCGTCAACAAAGGGCAAAATAGGAATTTAATAAAAATGTAAGGGTAAAAGAGGAATGCAAAGATTCTCCCCTCTAAGCCCCATTTATATATATTAAGATTATTCAAAGGTTAGTCCTTAAAGTTTTTAAAAAAATATCTATTTGAGTTCCAAAAAAAGTAACACCATCTAGTCTGTACTCTTATTTTGATTTTTATAACCTCGAGTATATATACTAACATGCTAAATTGAGCATTTCTTCAAATCAATATAGGTTTAAATTAGACATTATAGATAAGCAAATTGTGTGCAAAAATAACATAACAAGTAACGACTAAAAGAGTTAATTTTAAGAAATAAAATAGAGATTATGAAAAACTTTTCAACCATCAAAATAGTTATGTTTGAAACAATTGAAGGCCAATAATTATAATTAGAAGAAATTAATAATTAAACAAAGAAAGGAAAAGTTGGTCCCATGCATTTATTAGAATAAGAAGTTAGTAGCAAGTGGTTATTGTTAACTTCTTCGTACATCTCAACACTCTCTTTCAAAACTCTCAATCAATCATATGCATGCATGAAATATCAACACTACGACCAATAATCAATATTCTTCGCATGCTTCCTTTGACTCAGTCAACTCCCTCCACTTTTTCAAACGGTCAACTCCTTTGACCTCTTCCTCAGTTCCTCTCTCTCTCTCTCACTATATATATATATATATATAAAACACACACAAAAGCAGAAGCAGAAGTCATATGATATATATTTGGTGTCAAAATGGCTGAGTACTCGAAGGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG MLSADAIVNASVESAHNCSPHYASADTSLPTHEKYASAEPLPTRFSQQFSRRLNTRRENLCRRVFRSFQTHMHVAAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVMIRSQFEERTESCRIATTSFLHSESFKDLDRLLKLDLPSVEDLTWIWAD Homology
BLAST of Spg011776 vs. NCBI nr
Match: XP_022926399.1 (VQ motif-containing protein 10-like [Cucurbita moschata] >KAG6594463.1 VQ motif-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.0 bits (297), Expect = 4.1e-23 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. NCBI nr
Match: XP_023518171.1 (VQ motif-containing protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 118.6 bits (296), Expect = 5.3e-23 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. NCBI nr
Match: KAG7026461.1 (hypothetical protein SDJN02_10461, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117.9 bits (294), Expect = 9.1e-23 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. NCBI nr
Match: XP_023003955.1 (VQ motif-containing protein 10 [Cucurbita maxima]) HSP 1 Score: 115.2 bits (287), Expect = 5.9e-22 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.4 bits (272), Expect = 3.2e-20 Identity = 62/102 (60.78%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18 Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 6.8e-16 Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|