Spg011776 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg011776
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVQ motif-containing protein 10-like
Locationscaffold1: 1652968 .. 1655187 (+)
RNA-Seq ExpressionSpg011776
SyntenySpg011776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTCGGGAAAGACCTTAATTGTTGTAGTGATAGATGCCTCAACTCGAAGAGTTGCATCTTGTCAGTAAAGATTGAAGGACAAAATAAAAATTTATTAGAATTCTACGAACAAAGGAGGGAAAAAATATGATATTTACATCCATTTTAAGATGTGATATTTTAAATAAAATTTTGATGACTTTGAACAATTTCTTAACTTTTTTTTGTTGGACCACATGATTTTTACGTTTTCTTTGTTCCTATATTTAGATGTACATCAGATGAAAGGAAAAAAAATACATTTTTATTTCAATTCTAAGGTTTTTTTTAATAATTAAAAATAGTTAAACAAATATATAATTTATAATAGGGAGAAAGAAAACTTATAATGTATTGAAATTCTTTAGTGTAATTTTAAATAATTAATTTTGTTGAAAATATAACTGAATCCAAATGGGTACAAAATGTAAAATATTTGAGATTTGGAAACACAGAGTAATCCTTCTAAAATTATATTTTCCAGAAGGAATTTACGAAATAACATTTGATGGATATATATATAACATTTATTGACATAAGAAAAATAAAAAATGATATACAATAAAACCTCTTCGTCGAAAAAAATGAGTTTTTGAATTCTCAAACTTCATTTTGACACAATTCAATGTTTCCTTATGAAGAACATAAACTTTTAATTTCCATTCTTTTTGGAAAACTTTGAATTCTTTGATAAAAGGAGAACGTTTGCTATAATGACATGATATTTTGATAGAAATAAATAAAAAAATGTATGTATTGACAATCATGTTTCTTTCTTTTTATACATGGATCATACCCATAGGATGCATCAATTCATATGTAACCACCTAAGAGTCGCACCTCGTCGGCACCAGTTACACCCATACAAAGTGATACATTTGAAGAGTCGTGTCCCGTCAACAAAGGGCAAAATAGGAATTTAATAAAAATGTAAGGGTAAAAGAGGAATGCAAAGATTCTCCCCTCTAAGCCCCATTTATATATATTAAGATTATTCAAAGGTTAGTCCTTAAAGTTTTTAAAAAAATATCTATTTGAGTTCCAAAAAAAGTAACACCATCTAGTCTGTACTCTTATTTTGATTTTTATAACCTCGAGTATATATACTAACATGCTAAATTGAGCATTTCTTCAAATCAATATAGGTTTAAATTAGACATTATAGATAAGCAAATTGTGTGCAAAAATAACATAACAAGTAACGACTAAAAGAGTTAATTTTAAGAAATAAAATAGAGATTATGAAAAACTTTTCAACCATCAAAATAGTTATGTTTGAAACAATTGAAGGCCAATAATTATAATTAGAAGAAATTAATAATTAAACAAAGAAAGGAAAAGTTGGTCCCATGCATTTATTAGAATAAGAAGTTAGTAGCAAGTGGTTATTGTTAACTTCTTCGTACATCTCAACACTCTCTTTCAAAACTCTCAATCAATCATATGCATGCATGAAATATCAACACTACGACCAATAATCAATATTCTTCGCATGCTTCCTTTGACTCAGTCAACTCCCTCCACTTTTTCAAACGGTCAACTCCTTTGACCTCTTCCTCAGTTCCTCTCTCTCTCTCTCACTATATATATATATATATATAAAACACACACAAAAGCAGAAGCAGAAGTCATATGATATATATTTGGTGTCAAAATGGCTGAGTACTCGAAGGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG

mRNA sequence

ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG

Coding sequence (CDS)

ATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGTAGAAAGTGCCCATAATTGCTCCCCACATTATGCGTCGGCAGATACGTCTCTGCCGACGCATGAAAAATACGCGTCGGCAGAGCCTCTGCCGACACGTTTTTCCCAACAATTCTCCCGACGTCTGAATACGCGTCGGGAGAACCTTTGCCGACGCGTATTCCGATCTTTCCAGACGCATATGCACGTGGCAGCTGCCCCAGTGAAGGTCGTGATGATTGAGTACCACCATGTTCACACCGACGCCTCCAACTTCAAGTCCGTCGTTCAGAGCCTCACCGGCAAGCATTCCTCCGCCGTCCACACCTCTGGAGAGACCAGGAAGAGGCGGCGACTGGATGACACAGTTATGATCAGAAGCCAGTTTGAAGAACGCACTGAAAGTTGCAGGATCGCCACCACGTCGTTTCTGCACAGCGAGTCGTTTAAGGATTTGGATCGCTTGCTCAAGCTCGACCTGCCTTCCGTTGAGGATCTCACCTGGATTTGGGCTGATTAG

Protein sequence

MLSADAIVNASVESAHNCSPHYASADTSLPTHEKYASAEPLPTRFSQQFSRRLNTRRENLCRRVFRSFQTHMHVAAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVMIRSQFEERTESCRIATTSFLHSESFKDLDRLLKLDLPSVEDLTWIWAD
Homology
BLAST of Spg011776 vs. NCBI nr
Match: XP_022926399.1 (VQ motif-containing protein 10-like [Cucurbita moschata] >KAG6594463.1 VQ motif-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.0 bits (297), Expect = 4.1e-23
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM--IRSQ 134
           AA PVKVV IEYHH+ TD +NFKSVVQ+LTG +S+A    G TRK+RR+D+ ++    ++
Sbjct: 6   AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA---GGNTRKKRRVDENIIDARSAR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE TESC   TTS L S SF+DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTESCETDTTSSLQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. NCBI nr
Match: XP_023518171.1 (VQ motif-containing protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-23
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM-IRS-Q 134
           AA PVKVV IEYHH+ TD SNFKSVVQ+LTG +S A    G TRK+RR+D+ ++ +RS +
Sbjct: 6   AAGPVKVVFIEYHHIQTDVSNFKSVVQTLTGMNSPA---GGNTRKKRRVDENIIDVRSDR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE TESC   TTS   S SF+DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTESCETDTTSSQQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. NCBI nr
Match: KAG7026461.1 (hypothetical protein SDJN02_10461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.9 bits (294), Expect = 9.1e-23
Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM--IRSQ 134
           AA PVKVV IEYHH+ TD +NFKSVVQ+LTG +S+A    G TRK+RR+D+ ++    ++
Sbjct: 6   AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA---GGNTRKKRRVDENIIDARSAR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE TESC   TTS L S S++DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. NCBI nr
Match: XP_023003955.1 (VQ motif-containing protein 10 [Cucurbita maxima])

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-22
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM-IRS-Q 134
           AA PVKVV IEYHH+ TD SNFKSVVQ+LTG +S+A    G TRK+ R+D+ ++ +RS +
Sbjct: 6   AAGPVKVVFIEYHHIQTDVSNFKSVVQTLTGMNSTA---GGNTRKKPRVDENIIDVRSAR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE T SC   TTS + S SF+DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTVSCETDTTSSVQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.4 bits (272), Expect = 3.2e-20
Identity = 62/102 (60.78%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 76  AAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGET-RKRRRLDDTVMIRSQFE 135
           A  VKVV+IEYHHVHTD S+FKSVVQ+LTGKHSSAV   G T RKR R++    +   + 
Sbjct: 9   AGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVE----VEKSYM 68

Query: 136 ERTESCRIATTSFLHSESFKDLDRLLKLDLPSVEDLTWIWAD 177
            R       T SFLHS SFKDLDR L L LP++EDL WIWAD
Sbjct: 69  NR-------TASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99

BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM--IRSQ 134
           AA PVKVV IEYHH+ TD +NFKSVVQ+LTG +S+A    G TRK+RR+D+ ++    ++
Sbjct: 6   AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA---GGNTRKKRRVDENIIDARSAR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE TESC   TTS L S SF+DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTESCETDTTSSLQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 75  AAAPVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGETRKRRRLDDTVM-IRS-Q 134
           AA PVKVV IEYHH+ TD SNFKSVVQ+LTG +S+A    G TRK+ R+D+ ++ +RS +
Sbjct: 6   AAGPVKVVFIEYHHIQTDVSNFKSVVQTLTGMNSTA---GGNTRKKPRVDENIIDVRSAR 65

Query: 135 FEERTESCRIATTSFLHSESFKDLD-RLLKLDLPSVEDLTWIWAD 177
           FEE T SC   TTS + S SF+DLD  LLKL+LPS+EDL WIWAD
Sbjct: 66  FEESTVSCETDTTSSVQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 0

Query: 76  AAPVKVVMIEYHHVHTDASNFKSVVQSLTG---KHSSAV----HTSGETRKRRRLDDTVM 135
           +APVKVV+IEYHHV TD SNFKSVVQSLTG   + SSA+      +G+T KRRR D    
Sbjct: 4   SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSA 63

Query: 136 IRSQFEERTESCRIATTSF-LHSESFKDLDRLLKLDLPSVEDLTWIWAD 177
             +Q   +T +    TT F LH+ SFKDLDRLLK +LPSV+DL WIWAD
Sbjct: 64  AANQTIIQTTA---TTTPFDLHTMSFKDLDRLLKFNLPSVQDLDWIWAD 109

BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16
Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 0

Query: 77  APVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGE-TRKRRRLDDTVMIRSQFEE 136
           A V+VV+IEYHH+ TDASNFKSVVQSLTGKHSS     GE  RKR+R    V+ R+  E 
Sbjct: 8   AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQR----VVARNNNES 67

Query: 137 RTESCRIATTSFLHSESFKDLDRLLKLDLPSVEDLTWIWAD 177
                +  +   +H+ SFKDLDRLL L+LPS+EDL WI  D
Sbjct: 68  IININQ--SVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102

BLAST of Spg011776 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.8e-16
Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 0

Query: 77  APVKVVMIEYHHVHTDASNFKSVVQSLTGKHSSAVHTSGE--TRKRRRLDDTVMIRSQFE 136
           A V+VV+IEYHH+ TDASNFKSVVQSLTGKHS A    G    RKR+R+   V   +  E
Sbjct: 28  AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSPAAEDDGGEICRKRQRV---VSQNNNHE 87

Query: 137 ERTESCRIATTSFLHSESFKDLDRLLKLDLPSVEDLTWIWAD 177
             T   +      +H++SFKDLDRLL L+LPS+EDL WI  D
Sbjct: 88  SITNINQ--RVKMIHTKSFKDLDRLLALELPSMEDLNWILTD 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022926399.14.1e-2361.90VQ motif-containing protein 10-like [Cucurbita moschata] >KAG6594463.1 VQ motif-... [more]
XP_023518171.15.3e-2363.81VQ motif-containing protein 10-like [Cucurbita pepo subsp. pepo][more]
KAG7026461.19.1e-2360.95hypothetical protein SDJN02_10461, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023003955.15.9e-2261.90VQ motif-containing protein 10 [Cucurbita maxima][more]
KAG7034723.13.2e-2060.78hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EF022.0e-2361.90VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC11143356... [more]
A0A6J1KT832.9e-2261.90VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 ... [more]
A0A6J1CYB01.9e-1858.72uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3CN211.1e-1656.44VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KNW86.8e-1654.90VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 89..109
e-value: 3.4E-9
score: 36.0
IPR039608VQ motif-containing protein 1/10PANTHERPTHR34777VQ MOTIF-CONTAINING PROTEIN 10coord: 74..176
NoneNo IPR availablePANTHERPTHR34777:SF1VQ MOTIF-CONTAINING PROTEIN 10coord: 74..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg011776.1Spg011776.1mRNA