Spg011695 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011695
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein E6
Location	scaffold1: 2830767 .. 2831597 (+)
RNA-Seq Expression	Spg011695
Synteny	Spg011695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCACCCAAACTCACTCCTCTTCTCCTCATTCTCAGCCTTCTACTCATTCAAATCCATGCAAGAGAAAGCCACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCGACAAAGTCGTCGACCCTTTAACAAACCCACAAAAAACCACCACCCCACAAGACAAACAACCCGATTTCATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGCCACGAATCCGGCCAGCTCCCTCCTAATTCCGACGCCAAATTCTCCGACCGCCCATTTACCACCTACGACGACGAGGACAACAACTACAGAAGAAACGACGCCGTTTCTTACAAATCCGAGTCAGGAGATGGCTACAACAACTACAACAACAACTTCAACAACAACGACAATTTCCAAAACGGCAACTCGAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTCTACGACAACGGACGACAAAGCTTCCAGAACACCCGCCTTTCACGAGACGATTACAGAACAACTCCTTTATACGACCAGGAAAAATACGACGACAAATACAACAACTTCTACTACAACAACAACAACAACGGCGGCGACAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAAATACTTTTATGACCTCAACAGTGAGCCTCACCACTACAGCAGTTCCAGGGGCTATTTCGGAAACAACAACAACAACAACAACGGCAACCCATACGAGTACGGTAATTCCATGGGAAAGTACCAGAATGATGACGCTGAATTCCAGGAGCAACCCGATGAGTTCGTGCCGTAA

mRNA sequence

ATGGCTTCCTCACCCAAACTCACTCCTCTTCTCCTCATTCTCAGCCTTCTACTCATTCAAATCCATGCAAGAGAAAGCCACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCGACAAAGTCGTCGACCCTTTAACAAACCCACAAAAAACCACCACCCCACAAGACAAACAACCCGATTTCATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGCCACGAATCCGGCCAGCTCCCTCCTAATTCCGACGCCAAATTCTCCGACCGCCCATTTACCACCTACGACGACGAGGACAACAACTACAGAAGAAACGACGCCGTTTCTTACAAATCCGAGTCAGGAGATGGCTACAACAACTACAACAACAACTTCAACAACAACGACAATTTCCAAAACGGCAACTCGAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTCTACGACAACGGACGACAAAGCTTCCAGAACACCCGCCTTTCACGAGACGATTACAGAACAACTCCTTTATACGACCAGGAAAAATACGACGACAAATACAACAACTTCTACTACAACAACAACAACAACGGCGGCGACAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAAATACTTTTATGACCTCAACAGTGAGCCTCACCACTACAGCAGTTCCAGGGGCTATTTCGGAAACAACAACAACAACAACAACGGCAACCCATACGAGTACGGTAATTCCATGGGAAAGTACCAGAATGATGACGCTGAATTCCAGGAGCAACCCGATGAGTTCGTGCCGTAA

Coding sequence (CDS)

ATGGCTTCCTCACCCAAACTCACTCCTCTTCTCCTCATTCTCAGCCTTCTACTCATTCAAATCCATGCAAGAGAAAGCCACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCGACAAAGTCGTCGACCCTTTAACAAACCCACAAAAAACCACCACCCCACAAGACAAACAACCCGATTTCATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGCCACGAATCCGGCCAGCTCCCTCCTAATTCCGACGCCAAATTCTCCGACCGCCCATTTACCACCTACGACGACGAGGACAACAACTACAGAAGAAACGACGCCGTTTCTTACAAATCCGAGTCAGGAGATGGCTACAACAACTACAACAACAACTTCAACAACAACGACAATTTCCAAAACGGCAACTCGAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTCTACGACAACGGACGACAAAGCTTCCAGAACACCCGCCTTTCACGAGACGATTACAGAACAACTCCTTTATACGACCAGGAAAAATACGACGACAAATACAACAACTTCTACTACAACAACAACAACAACGGCGGCGACAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAAATACTTTTATGACCTCAACAGTGAGCCTCACCACTACAGCAGTTCCAGGGGCTATTTCGGAAACAACAACAACAACAACAACGGCAACCCATACGAGTACGGTAATTCCATGGGAAAGTACCAGAATGATGACGCTGAATTCCAGGAGCAACCCGATGAGTTCGTGCCGTAA

Protein sequence

MASSPKLTPLLLILSLLLIQIHARESHFFSKVPNNNGETQIPDKVVDPLTNPQKTTTPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFSDRPFTTYDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPHHYSSSRGYFGNNNNNNNGNPYEYGNSMGKYQNDDAEFQEQPDEFVP

Homology

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BLAST of Spg011695 vs. NCBI nr
Match: KAA0052668.1 (protein E6 [Cucumis melo var. makuwa] >TYK13157.1 protein E6 [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.9e-96
Identity = 215/306 (70.26%), Postives = 241/306 (78.76%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARES-HFFSKVPNNN----------GETQIP-DKVVDP 60
           MASSPKL   +LIL+LL IQIHARES +FFSK+PNNN           ETQIP D+ VDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTNPQKTTT-PQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKF-------SDRPF--- 120
           LTNP+KTTT PQD+QP+FIPQTQDNGYGLYGHESGQLPPNSD+KF       + R F   
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TTYDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNN-DNFQNGNSKPYENSFYYNKDLYD 180
           TTYD+ DN +R +   +YKSES + YN  +NN NNN   F+N NSKPYENSFYYNKDLYD
Sbjct: 121 TTYDNNDNKFRNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLYD 180

Query: 181 NGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGD---NANNVVRQGMSDT 240
           NGRQSFQNTRLSRDDY TTPLYDQ KYD+     +YN+NN GGD   N NN+VRQGMSDT
Sbjct: 181 NGRQSFQNTRLSRDDYTTTPLYDQGKYDN-----FYNSNNGGGDNNNNGNNMVRQGMSDT 240

Query: 241 RFMENGKYFYDLNSEPHHYSSSRGYFGNN-NNNNNGNPYEYGNSMGKY--QNDDAEFQEQ 277
           RFMENGKY+YDL+ EPHHYS SRGYFGNN NNNNN N YEYGNSMG+Y  QND+AEFQE+
Sbjct: 241 RFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEE 300

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BLAST of Spg011695 vs. NCBI nr
Match: XP_008441080.1 (PREDICTED: protein E6 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 2.5e-96
Identity = 215/307 (70.03%), Postives = 241/307 (78.50%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARES-HFFSKVPNNN-----------GETQIP-DKVVD 60
           MASSPKL   +LIL+LL IQIHARES +FFSK+PNNN            ETQIP D+ VD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTNPQKTTT-PQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKF-------SDRPF-- 120
           PLTNP+KTTT PQD+QP+FIPQTQDNGYGLYGHESGQLPPNSD+KF       + R F  
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 -TTYDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNN-DNFQNGNSKPYENSFYYNKDLY 180
            TTYD+ DN +R +   +YKSES + YN  +NN NNN   F+N NSKPYENSFYYNKDLY
Sbjct: 121 TTTYDNNDNKFRNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLY 180

Query: 181 DNGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGD---NANNVVRQGMSD 240
           DNGRQSFQNTRLSRDDY TTPLYDQ KYD+     +YN+NN GGD   N NN+VRQGMSD
Sbjct: 181 DNGRQSFQNTRLSRDDYTTTPLYDQGKYDN-----FYNSNNGGGDNNNNGNNMVRQGMSD 240

Query: 241 TRFMENGKYFYDLNSEPHHYSSSRGYFGNN-NNNNNGNPYEYGNSMGKY--QNDDAEFQE 277
           TRFMENGKY+YDL+ EPHHYS SRGYFGNN NNNNN N YEYGNSMG+Y  QND+AEFQE
Sbjct: 241 TRFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQE 300

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BLAST of Spg011695 vs. NCBI nr
Match: XP_022978743.1 (protein E6-like [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 7.4e-96
Identity = 212/288 (73.61%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARESHFFSKVPNNNG-----ETQIPDK--VVDPLTNPQ 60
           MASS KL   LL L+LL IQ+HARESHFFSKVPNN G     ETQIP+K    DPLTNPQ
Sbjct: 1   MASSTKLISTLL-LALLFIQVHARESHFFSKVPNNGGTFYTKETQIPNKEEEEDPLTNPQ 60

Query: 61  KTT-TPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFS-DRPFTTYDDEDNNYRRND 120
           KT+ TPQD  P+F+PQTQDN YGLYGHESGQLPPNSD  FS DRP      +DN YRRND
Sbjct: 61  KTSGTPQDHDPNFLPQTQDNNYGLYGHESGQLPPNSDDNFSGDRP------DDNKYRRND 120

Query: 121 AVSYKSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDD 180
           AVSYKSES          F +NDNFQNGN+KPYENSFYYNKDLYDNGRQSF+NTRLSR+D
Sbjct: 121 AVSYKSES--------EEFYDNDNFQNGNTKPYENSFYYNKDLYDNGRQSFRNTRLSRND 180

Query: 181 YRTTPLYDQEKY-DDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPH 240
           Y TTPLY+QEKY DD  NNFYYN+NNN  +NANNVVRQGMSDTRFMENGKY+YDL+ EPH
Sbjct: 181 YTTTPLYNQEKYHDDDDNNFYYNSNNN--NNANNVVRQGMSDTRFMENGKYYYDLDREPH 240

Query: 241 HYSSSRGYFGNNNNNNNGNPYEYGNSMGKY--QNDDAEFQEQPDEFVP 277
           HYS SRGYF   NNNNNGN Y+YGNSMG+Y  QND+AEFQE+ DEFVP
Sbjct: 241 HYSRSRGYF-RTNNNNNGNTYKYGNSMGRYQNQNDEAEFQEELDEFVP 270

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BLAST of Spg011695 vs. NCBI nr
Match: KAG6604465.1 (Protein E6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-94
Identity = 200/279 (71.68%), Postives = 223/279 (79.93%), Query Frame = 0


Query: 12  LILSLLLIQIHARESHFFSKVPNNNG-----ETQIPDKVVDPLTNPQKTT-TPQDKQPDF 71
           L+L+LL  Q+HARESHFFSKVPNN G     ETQIP+K  DPLT+PQKT+ TPQD+ P+F
Sbjct: 10  LLLALLFFQVHARESHFFSKVPNNGGTFYTKETQIPNKAEDPLTSPQKTSGTPQDQDPNF 69

Query: 72  IPQTQDNGYGLYGHESGQLPPNSDAKFS-DRPFTTYDDEDNNYRRNDAVSYKSESGDGYN 131
           +PQTQDN YGLYGHESGQLPPNSD  FS DRP      +DN YRRNDAV YKSES     
Sbjct: 70  LPQTQDNNYGLYGHESGQLPPNSDDNFSGDRP------DDNKYRRNDAVPYKSES----- 129

Query: 132 NYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYRTTPLYDQEKY- 191
                +++NDNFQN N+KPYENSFYYNKDLYDNGRQSF+NTRLSR+DY TTPLY+QEKY 
Sbjct: 130 ---EEYDDNDNFQNSNTKPYENSFYYNKDLYDNGRQSFRNTRLSRNDYTTTPLYNQEKYH 189

Query: 192 ----DDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPHHYSSSRGYF 251
               DD  NNFYYNNNNN   NANNVVRQGMSDTRFMENGKY+YDL+ EPHHYS SRGYF
Sbjct: 190 NDDHDDDNNNFYYNNNNN---NANNVVRQGMSDTRFMENGKYYYDLDREPHHYSRSRGYF 249

Query: 252 GNNNNNNNGNPYEYGNSMGKY--QNDDAEFQEQPDEFVP 277
               NNNNGN YEYGNSMG+Y  QND+AEFQE+ D+FVP
Sbjct: 250 ---RNNNNGNTYEYGNSMGRYQNQNDEAEFQEELDDFVP 268

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BLAST of Spg011695 vs. NCBI nr
Match: XP_038883950.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-94
Identity = 206/290 (71.03%), Postives = 233/290 (80.34%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARES-HFFSKVPNNN------GETQIPDKVVDPLTNPQ 60
           MASSPKL   +L+LSLLLIQIHARES +FFSKVPNNN       ETQ+P+  +DPLTNP+
Sbjct: 1   MASSPKLLTSILLLSLLLIQIHARESKYFFSKVPNNNVDNFDAKETQLPNNKIDPLTNPE 60

Query: 61  K-TTTPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFS--DRPFTTYDD--EDNNYR 120
           K TTTPQD++P+FIPQTQDN YGLYGHESGQLPPNSD KFS   RPFTT     ++NNY 
Sbjct: 61  KTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSDNKFSGGGRPFTTTTTTYDNNNYY 120

Query: 121 RNDAVSYKSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLS 180
           RNDAV       + Y NYNNN + N+ F+N  SKPYENSFYYNKDLYDNG+QSFQNTRLS
Sbjct: 121 RNDAVPNNKPESEEYYNYNNN-DYNEYFENSKSKPYENSFYYNKDLYDNGQQSFQNTRLS 180

Query: 181 RDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSE 240
           +DDY TTPLYDQ KYD+ Y+N     ++N  DN NNVVRQGMSDTRFMENGKY+YDLN E
Sbjct: 181 QDDY-TTPLYDQGKYDNFYSNNNGRGSSNNNDNGNNVVRQGMSDTRFMENGKYYYDLNRE 240

Query: 241 PHHYSSSRGYFGNNNNNNNGNPYEYGNSMGKY--QNDDAEFQEQPDEFVP 277
           PHHYS SRGYFG NNNNNN N YEYGNSMG+Y  QND+AEFQE+P+EFVP
Sbjct: 241 PHHYSRSRGYFG-NNNNNNPNTYEYGNSMGRYQNQNDEAEFQEEPNEFVP 287

[Close]

BLAST of Spg011695 vs. ExPASy Swiss-Prot
Match: Q01197 (Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.5e-24
Identity = 102/285 (35.79%), Postives = 145/285 (50.88%), Query Frame = 0


Query: 1   MASSPKL--TPLLLILSLLLIQIHARESHFFSKVPN---NNGETQIPDKVVDPLTNPQKT 60
           MASSPKL    +L + +L  +QIHARE  +FSK P    N  ET   ++  +    PQ T
Sbjct: 1   MASSPKLFSMSILFLFALFSMQIHARE--YFSKFPRVNINEKETTTREQKHETFV-PQTT 60

Query: 61  TTPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFSDRPFTTYDDEDNNYRRNDAVSY 120
             P++++P FIP+TQ NGYGLYGHESG   P+   K +  P+ T                
Sbjct: 61  QKPEEQEPRFIPETQ-NGYGLYGHESGSSRPSFTTKETYEPYVT--------------PV 120

Query: 121 KSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYRTT 180
           +    + YN+   + NN D            ++YYNK+ Y++ +Q      +  +   +T
Sbjct: 121 RFHPDEPYNSIPESSNNKD------------TYYYNKNAYESTKQQNLGEAIFTEKGWST 180

Query: 181 PLYDQEKYDDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSE----PHH 240
                    +  NN YYN NN      NN  +QGMSDTR++ENGKY+YD+ SE    P+ 
Sbjct: 181 --------KENQNNNYYNGNN----GYNNGEKQGMSDTRYLENGKYYYDVKSENNYYPNR 238

Query: 241 YSSSRGYFGNNNNNNNGNPYEYGNSMGKYQNDDAEFQEQPDEFVP 277
           + +SRG    N  N N     Y N+MG+Y  +  EF+E  +EF P
Sbjct: 241 FDNSRGVASRNEFNEN----RY-NNMGRYHQNQEEFEESEEEFEP 238

[Close]

BLAST of Spg011695 vs. ExPASy Swiss-Prot
Match: Q54IV3 (Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum OX=44689 GN=ddx42 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 56/217 (25.81%), Postives = 97/217 (44.70%), Query Frame = 0


Query: 49  LTNPQKTTTPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFSDRPFTTYDDEDNNYR 108
           L NP  T   +    +      +N +    + SG     +   + +  F    +  NN  
Sbjct: 751 LFNPNNTDNSEINNENEKSINNENKFS--NNNSGSSNDRNSINYRNNSFNNNSNNTNNSG 810

Query: 109 RNDAVSYKSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLS 168
            ++  +  S +G   NNYNNN+ NN N+ N N+    NS+Y N +  +N   ++ N+  S
Sbjct: 811 NSNFNNSNSNNGYSNNNYNNNYKNNSNYNNSNNN--NNSYYNNNNSNNNNNSNYNNS--S 870

Query: 169 RDDYRTTPLYDQEKYDDKY-NNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNS 228
            ++      Y     ++ Y NN YYNNNN+  +++NN      S      N     + N+
Sbjct: 871 NNNNNNNNNYRNGNNNNNYNNNNYYNNNNSNNNSSNNNNSNNNSSNNNFNNNFNNNNNNN 930

Query: 229 EPHHYSSSRGY--FGNNNNNNNGNPYEYGNSMGKYQN 263
           +  +++ +  +  F NNNNN+N N + Y N+     N
Sbjct: 931 DNSNFNRALPFNDFNNNNNNSNNNNFNYNNNFNNSYN 961

[Close]

BLAST of Spg011695 vs. ExPASy Swiss-Prot
Match: Q54VM3 (TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum OX=44689 GN=tbc1d5A PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.1e-04
Identity = 62/219 (28.31%), Postives = 95/219 (43.38%), Query Frame = 0


Query: 60  DKQPDFIPQTQDNGYG----LYGHESGQLPPNSDAKFSDRPFTTYDDEDNNYRRNDAVSY 119
           ++  DF      + YG    ++  ES     N++   +D     Y D +NNY  N   +Y
Sbjct: 110 EQDVDFGENAHSSNYGDNNNIFSDESNNY--NNNNNNNDYNNNNYYD-NNNYNENYNENY 169

Query: 120 KSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYRTT 179
                +  NN NNN NNN+N  N N+    N+ YYN+   +N +Q  Q    S ++Y   
Sbjct: 170 NENYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYYNE---NNNQQQLQQ-NYSNNNYNNE 229

Query: 180 PLYDQEKYDDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPHHYSSS 239
            + +    D+ YNN   NNNNN   N  N    G  ++    N   +YD           
Sbjct: 230 YINNFNNNDNSYNNNNNNNNNNSNFNNYNNNNNGYDNSYSNSNNNNYYD----------- 289

Query: 240 RGYFGNNNNNNNGNPYEYGNSMGKYQNDDAEFQEQPDEF 275
                +NNN+ N N Y   N   +Y  ++ + Q+Q +EF
Sbjct: 290 ----NSNNNSKNDNQY---NQQQQYYQEEEQQQQQHEEF 303

[Close]

BLAST of Spg011695 vs. ExPASy TrEMBL
Match: A0A5D3CMI3 (Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.4e-97
Identity = 215/306 (70.26%), Postives = 241/306 (78.76%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARES-HFFSKVPNNN----------GETQIP-DKVVDP 60
           MASSPKL   +LIL+LL IQIHARES +FFSK+PNNN           ETQIP D+ VDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTNPQKTTT-PQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKF-------SDRPF--- 120
           LTNP+KTTT PQD+QP+FIPQTQDNGYGLYGHESGQLPPNSD+KF       + R F   
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TTYDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNN-DNFQNGNSKPYENSFYYNKDLYD 180
           TTYD+ DN +R +   +YKSES + YN  +NN NNN   F+N NSKPYENSFYYNKDLYD
Sbjct: 121 TTYDNNDNKFRNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLYD 180

Query: 181 NGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGD---NANNVVRQGMSDT 240
           NGRQSFQNTRLSRDDY TTPLYDQ KYD+     +YN+NN GGD   N NN+VRQGMSDT
Sbjct: 181 NGRQSFQNTRLSRDDYTTTPLYDQGKYDN-----FYNSNNGGGDNNNNGNNMVRQGMSDT 240

Query: 241 RFMENGKYFYDLNSEPHHYSSSRGYFGNN-NNNNNGNPYEYGNSMGKY--QNDDAEFQEQ 277
           RFMENGKY+YDL+ EPHHYS SRGYFGNN NNNNN N YEYGNSMG+Y  QND+AEFQE+
Sbjct: 241 RFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEE 300

[Close]

BLAST of Spg011695 vs. ExPASy TrEMBL
Match: A0A1S3B2M6 (protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96
Identity = 215/307 (70.03%), Postives = 241/307 (78.50%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARES-HFFSKVPNNN-----------GETQIP-DKVVD 60
           MASSPKL   +LIL+LL IQIHARES +FFSK+PNNN            ETQIP D+ VD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTNPQKTTT-PQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKF-------SDRPF-- 120
           PLTNP+KTTT PQD+QP+FIPQTQDNGYGLYGHESGQLPPNSD+KF       + R F  
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 -TTYDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNN-DNFQNGNSKPYENSFYYNKDLY 180
            TTYD+ DN +R +   +YKSES + YN  +NN NNN   F+N NSKPYENSFYYNKDLY
Sbjct: 121 TTTYDNNDNKFRNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLY 180

Query: 181 DNGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGD---NANNVVRQGMSD 240
           DNGRQSFQNTRLSRDDY TTPLYDQ KYD+     +YN+NN GGD   N NN+VRQGMSD
Sbjct: 181 DNGRQSFQNTRLSRDDYTTTPLYDQGKYDN-----FYNSNNGGGDNNNNGNNMVRQGMSD 240

Query: 241 TRFMENGKYFYDLNSEPHHYSSSRGYFGNN-NNNNNGNPYEYGNSMGKY--QNDDAEFQE 277
           TRFMENGKY+YDL+ EPHHYS SRGYFGNN NNNNN N YEYGNSMG+Y  QND+AEFQE
Sbjct: 241 TRFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQE 300

[Close]

BLAST of Spg011695 vs. ExPASy TrEMBL
Match: A0A6J1IU58 (protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.6e-96
Identity = 212/288 (73.61%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARESHFFSKVPNNNG-----ETQIPDK--VVDPLTNPQ 60
           MASS KL   LL L+LL IQ+HARESHFFSKVPNN G     ETQIP+K    DPLTNPQ
Sbjct: 1   MASSTKLISTLL-LALLFIQVHARESHFFSKVPNNGGTFYTKETQIPNKEEEEDPLTNPQ 60

Query: 61  KTT-TPQDKQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFS-DRPFTTYDDEDNNYRRND 120
           KT+ TPQD  P+F+PQTQDN YGLYGHESGQLPPNSD  FS DRP      +DN YRRND
Sbjct: 61  KTSGTPQDHDPNFLPQTQDNNYGLYGHESGQLPPNSDDNFSGDRP------DDNKYRRND 120

Query: 121 AVSYKSESGDGYNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDD 180
           AVSYKSES          F +NDNFQNGN+KPYENSFYYNKDLYDNGRQSF+NTRLSR+D
Sbjct: 121 AVSYKSES--------EEFYDNDNFQNGNTKPYENSFYYNKDLYDNGRQSFRNTRLSRND 180

Query: 181 YRTTPLYDQEKY-DDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPH 240
           Y TTPLY+QEKY DD  NNFYYN+NNN  +NANNVVRQGMSDTRFMENGKY+YDL+ EPH
Sbjct: 181 YTTTPLYNQEKYHDDDDNNFYYNSNNN--NNANNVVRQGMSDTRFMENGKYYYDLDREPH 240

Query: 241 HYSSSRGYFGNNNNNNNGNPYEYGNSMGKY--QNDDAEFQEQPDEFVP 277
           HYS SRGYF   NNNNNGN Y+YGNSMG+Y  QND+AEFQE+ DEFVP
Sbjct: 241 HYSRSRGYF-RTNNNNNGNTYKYGNSMGRYQNQNDEAEFQEELDEFVP 270

[Close]

BLAST of Spg011695 vs. ExPASy TrEMBL
Match: A0A6J1EH17 (protein E6-like OS=Cucurbita moschata OX=3662 GN=LOC111433304 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 9.1e-92
Identity = 198/281 (70.46%), Postives = 221/281 (78.65%), Query Frame = 0


Query: 12  LILSLLLIQIHARESHFFSKVPNNNG-----ETQIPDKVVDPLTNPQKTT-TP--QDKQP 71
           L+L+LL  Q+HARESHFFSKVPNN G     ETQIP+K  DPLT+PQKT+ TP  QD+ P
Sbjct: 10  LLLALLFFQVHARESHFFSKVPNNGGTFYTKETQIPNKAEDPLTSPQKTSGTPQDQDQDP 69

Query: 72  DFIPQTQDNGYGLYGHESGQLPPNSDAKFS-DRPFTTYDDEDNNYRRNDAVSYKSESGDG 131
           +F+PQTQDN YGLYGHESGQLPPNSD  FS DRP      +DN YRRNDAV YKSES   
Sbjct: 70  NFLPQTQDNNYGLYGHESGQLPPNSDDNFSGDRP------DDNKYRRNDAVPYKSES--- 129

Query: 132 YNNYNNNFNNNDNFQNGNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYRTTPLYDQEK 191
                  +++NDNFQN N+KPYENSFYYNKDLYDNGRQSF+NTR SR+DY TTPLY+QEK
Sbjct: 130 -----EEYDDNDNFQNSNTKPYENSFYYNKDLYDNGRQSFRNTRFSRNDYTTTPLYNQEK 189

Query: 192 Y-----DDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYDLNSEPHHYSSSRG 251
           Y     DD  NNFYYNNNN    NANNVVRQGMSDTRFMENGKY+YDL+ EPHHYS SRG
Sbjct: 190 YHNDDHDDDNNNFYYNNNN----NANNVVRQGMSDTRFMENGKYYYDLDREPHHYSRSRG 249

Query: 252 YFGNNNNNNNGNPYEYGNSMGKY--QNDDAEFQEQPDEFVP 277
           YF    NNNNGN YEYGNSMG+Y  QND+AEFQE+ D+FVP
Sbjct: 250 YF---RNNNNGNTYEYGNSMGRYQNQNDEAEFQEELDDFVP 269

[Close]

BLAST of Spg011695 vs. ExPASy TrEMBL
Match: A0A6J1EM79 (protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90
Identity = 209/292 (71.58%), Postives = 227/292 (77.74%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLIQIHARESHFFSKVPNNNGETQIPDKVVDPLTNPQKTTTPQD 60
           MASS KL  L L LSL  IQIH RES+FFSKVPNNNGE+QIP+K VDPLTN +KTTTPQD
Sbjct: 1   MASSTKLLSLFL-LSLFFIQIHGRESNFFSKVPNNNGESQIPNK-VDPLTNSEKTTTPQD 60

Query: 61  KQPDFIPQTQDNGYGLYGHESGQLPPNSDAKFSD-------RPF---TTYDDEDNNYRRN 120
           + P+FIPQTQDNGYGLYGHESGQ  P SDAKFSD       RPF   TTYDD +NNY+RN
Sbjct: 61  QDPNFIPQTQDNGYGLYGHESGQFSP-SDAKFSDPNARTGGRPFSTTTTYDDGENNYKRN 120

Query: 121 DAVSYKSESGDGYNNYNNNFNNNDNFQNGN-SKPYENSFYYNKDLYDNGRQSFQNTRLSR 180
           D VSYKSES + Y NYNNN+ NNDNFQN N  KPYENSFYYNKDLYDN RQSFQNTRLSR
Sbjct: 121 DDVSYKSES-EEYYNYNNNY-NNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSR 180

Query: 181 DDY----RTTPLYDQEKY-DDKYNNFYYNNNNNGGDNANNVVRQGMSDTRFMENGKYFYD 240
           ++Y     TTP YD+EKY DD  NN +Y NN N  DN NNV RQGMSDTRFMENGKYFYD
Sbjct: 181 NEYATTTTTTPSYDEEKYNDDNNNNNFYANNRN--DNENNVARQGMSDTRFMENGKYFYD 240

Query: 241 LNSEPHHYSSSRGYFGNNNNNNNGNPYEYGNSMGKYQNDDAEFQEQPDEFVP 277
           L+ EP H   SR    N  NNNN N YEYGNSMG+YQND+ EFQE+ DEFVP
Sbjct: 241 LHREPQH--QSRSSRNNFRNNNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 283

[Close]

BLAST of Spg011695 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-15
Identity = 90/287 (31.36%), Postives = 136/287 (47.39%), Query Frame = 0


Query: 11  LLILSLLLIQIHARESHFFSKVPNNNGETQIPDKVVDPLTNPQKTTTPQDKQPDFIPQTQ 70
           LL L L   QI AR S+ F K    + + Q P+ +V   TN +K   P D+ P FIPQ+ 
Sbjct: 13  LLTLVLFSTQISARNSYSFGKFQREDPKEQNPNNLVPIETNEKK--EPDDQNPAFIPQS- 72

Query: 71  DNGYGLYGHESGQLPPNSDAKFSDRPFTTYDDEDN-NYRRNDAVSYKSESGDGYNNYNNN 130
           +NGYGLYGHE+     N++ + ++  +     EDN NY  + +    SE+     +Y N 
Sbjct: 73  ENGYGLYGHET---TDNNNEELNNNKY-----EDNVNYDDSFSTPSLSETAQTQESYKN- 132

Query: 131 FNNNDNFQNGNSKPYENSFYYNKDLYDNGRQS--FQNTRLSRDDYRTTPLYDQEK-YDDK 190
                         Y+ S+    ++YDN + +  ++N+     D R   + D  K Y +K
Sbjct: 133 --------------YKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPYKGYSNK 192

Query: 191 YNNFYYNNNNNGGDNA----------NNVVRQGMSDTRFMENGKYFYDLNSE-------P 250
             ++Y N N  G +            NNV RQGMSDTR+M NGKY+YDL+ +        
Sbjct: 193 DTSYYENPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKYYYDLDDDRNHGRFYQ 252

Query: 251 HHYSSSRGYFGNNNNNNNGNPYEYGNSMGKYQNDDAEFQEQPDEFVP 277
           +HY + +    N   +N  NPY+        Q  +   +EQ D+  P
Sbjct: 253 NHYYNYKPTGYNEKKSNFKNPYD------SNQQSEMLGEEQGDQITP 267

[Close]

BLAST of Spg011695 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-15
Identity = 104/332 (31.33%), Postives = 153/332 (46.08%), Query Frame = 0


Query: 1   MASSPKLTPLLLILSLLLI--QIHARESHFFSKVPNNNGETQIPDKVVDPLTNPQKTTT- 60
           MA S + + L    +L+L+  QIHAR+S+FF K    + + Q P+  + PL   +KTT  
Sbjct: 1   MAFSTRGSLLFFFTTLVLLSTQIHARDSYFFGKFHRESPKDQNPNSFI-PLETSEKTTVE 60

Query: 61  -------PQDKQPDFIPQTQDNGYGLYGHESGQLPPN-----------SDAKFSDRPFTT 120
                   Q++ P F+P++  NGYGLYGHE+     N           +D K + + F+T
Sbjct: 61  ESVLNKKEQEQDPTFVPES-GNGYGLYGHETTYNNNNDNKEEFNNNNKNDEKVNSKTFST 120

Query: 121 -----YDDEDNNYRRNDAVSYKSESGDGYNNYNNNFNNNDNFQNGNSK-PYENSFY---Y 180
                 ++  NNY  N     ++    GYN  N  FNNN+N  + N K  + N+ Y   Y
Sbjct: 121 PSLSETEESFNNYEENYPKKTENYGTKGYN--NEEFNNNNNKYDANFKEEFNNNKYDENY 180

Query: 181 NKDLYDNGRQSFQNTRLSRDDYRTTPLYDQEKYDDKYNNFYYNNNNNGGD---------N 240
            K+ ++N   +  N     D+      + +   D+K N   YN+N  G +          
Sbjct: 181 AKEEFNNNNNN-NNYNYKYDENVKEESFPENNEDNKKN--VYNSNAYGTELERETPYKGY 240

Query: 241 ANNVVRQGMSDTRFMENGKYFYDL-NSEPH-------HYSSSRGYFGN--NNNNNNGNPY 276
           ++N+ RQGMSDTRFME G Y+YDL N   H       H  S  GY+ +     N     Y
Sbjct: 241 SHNLERQGMSDTRFMEKGSYYYDLYNDRNHGHYYRKSHSKSPAGYYSSPATETNYEQQSY 300

[Close]

BLAST of Spg011695 vs. TAIR 10
Match: AT1G03820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 42/100 (42.00%), Postives = 49/100 (49.00%), Query Frame = 0


Query: 179 DQEKYDDKYNNFYYNNNNNG--------GDN----ANNVVRQGMSDTRFMENGKYFYDLN 238
           D  +  DKYNN   NNNNNG         DN     N   +QGMSDTR MENGKYFYD  
Sbjct: 123 DLNEPKDKYNN---NNNNNGYTYTTNNYNDNGRGYGNEEEKQGMSDTRVMENGKYFYDTR 182

Query: 239 SEPHHYSSSRGY---FGNNNNNNNGNPYEYGNSMGKYQND 264
                 + SRGY    GN++ N      EY  S+   Q +
Sbjct: 183 GRNSENTPSRGYENARGNDHTNEFETMEEYYKSLEGSQEE 219

The following BLAST results are available for this feature:

BLAST of Spg011695 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052668.1	1.9e-96	70.26	protein E6 [Cucumis melo var. makuwa] >TYK13157.1 protein E6 [Cucumis melo var. ...	[more]
XP_008441080.1	2.5e-96	70.03	PREDICTED: protein E6 [Cucumis melo]	[more]
XP_022978743.1	7.4e-96	73.61	protein E6-like [Cucurbita maxima]	[more]
KAG6604465.1	5.3e-94	71.68	Protein E6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038883950.1	5.3e-94	71.03	protein E6-like [Benincasa hispida]	[more]

BLAST of Spg011695 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01197	3.5e-24	35.79	Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1	[more]
Q54IV3	1.4e-04	25.81	Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum OX=44689 G...	[more]
Q54VM3	4.1e-04	28.31	TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum OX=44689 GN=tb...	[more]

BLAST of Spg011695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CMI3	9.4e-97	70.26	Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE...	[more]
A0A1S3B2M6	1.2e-96	70.03	protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1	[more]
A0A6J1IU58	3.6e-96	73.61	protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1	[more]
A0A6J1EH17	9.1e-92	70.46	protein E6-like OS=Cucurbita moschata OX=3662 GN=LOC111433304 PE=4 SV=1	[more]
A0A6J1EM79	1.0e-90	71.58	protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1	[more]

BLAST of Spg011695 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33850.1	2.4e-15	31.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28400.1	5.2e-15	31.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G03820.1	4.2e-04	42.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..69
None	No IPR available	PANTHER	PTHR35274:SF2	E6-LIKE PROTEIN	coord: 1..276
IPR040290	Protein E6-like	PANTHER	PTHR35274	E6-LIKE PROTEIN	coord: 1..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011695.1	Spg011695.1	mRNA