Spg011378 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011378
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold8: 10802178 .. 10805872 (-)
RNA-Seq Expression	Spg011378
Synteny	Spg011378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTTAGGATGGTTCTGTTGTTAATGCTCTGTTTGGGGAGCTTGATTCGAAGGTTATTCTTGGGATTCCGAGGCCTAAGCAGGTGGGAGTTGATAAGCTCATTTGGCACCATGAGTAGGATGGGTGTTATACTGTTCGGAGTGGATATAGGCTGGCTTGCAGACTTAAGGAGACTGGTTCTTGCTCGAATTCAGAGTTGATTAAGGAGTGGTGGAAGTTTGTGTGGAGTAGGCAAGTTCCATCCAAAATCAAATTCTTTTGTTGGAGGCTCTATCATGATTATCTTCCTACTATGATCAATTTACAAAAAAGGGGGATGGAGGTTTCAGTGACCTGTCTGAGATGTCGAAGGGGCGAGGAATCTTCCTTTCATGCTATTTCTGACTGTAAATGGGTGAGGAAGCAGTGGAAGCTTTCACCGTTTGCTCCTATTTTCGAGTCTCAGGACTTAAAGTGTGCGGCTGATTTATTGTGGTGGTGTAGAAGCAACTTATCCCCGGCCAGCTTCGATGAGTTCGTGGGGCTGAGTTGGTGGATCTGGAATAGTAGGAATAAGGTGGTTCACTCCAAGGGTGAGACAGGCCTAGCAGTAGGTGAGGGATGGAGCTGGGTGGTGGATTATTTGGAGCATTTCAGGGCGTTTAGGGGAGGAAAACAGGGGGGATAGGCTTGAAAAAAAGAAATGGTCCCCTCCCAAATTCCCTAACTACAAACTTAACACAGATGCGGCAACCAACAGAAATTCACAGTCAAGCGGTATAAGTGCGATAATTAGAGATGAGAGGGGGAAGATGATGCTTACGGCTTTGAAGTTTCTCCCCAATGTGACCGATGTTGATTCTGTCGAAGCCATGGCTATCAGAGATGGATTGATGGTTGCAAGGGACGCTGGATTTAGCAGGTTGGAGATCGAAACCGATTCAGCTCGTGTGGCAGCACTGATTTGTTCTGAGAAGGTGGATCTGTCGGAAGTTGGAGAGATTGTTCGTGAAGTCCGCCACCTCTTGAAGGGCTTTACCTTCTTCTCGATCAGGTGGTGTCGGAGGGAGGCGAACCAATTGGCTCATGCAGCGGCAAGGCTGGCGGTGGAGCAGGCAGTCGACGGTATCTGGATCGAGGAAGTGCCGTTACAGCTGGTTGATGGGTACTAGAGTGAGATTTTGGACAGTTGCCCTAATCTCTCGAGAAGTCGGTCTGTGTAATGAATTTTCTGATATTTTTCCTGTTCAAAAAAAAAAAAAAAAACAAGCTTTTAAAAATATTTTTCCTCAAAATTTGTCATTTTCTTTAACTAAATTTTTAAAATTACAATCATATCCTTCTATATATATCATTTTTTTTTTCTTTCACATTTATTTTATCATTACATTAATAAAATTTGATTTATACAATTTTTTTTAATAACAATTGTTTTTCTTAAACTTTGATCAAATAATTTAAATTAAACAAAATAAATTGCAATTTATATCATACAAAATTTTAAACAATTAACTTATAAAATAGATATTAAATATCAATATAACAACCATTAAAAAACATGTCTCGACATTACAATTGTTGTTATAGGTAATTTTGGACCACTCCGAAGCACTAGGAGCTGATGGAGACAGCCGGGCAAAGATAGGGCGAGGAAACCGACCCAGAAGAAGACCGGACCAAAGGGTCGGGCCAAATGGTCCGCCTCTTGCCAAGGCCGAGGCTGAGCATAATGGTCGGCCTCTTGCCAAGGCCGAGGCCGACCATTCAGCCCGTTTGCGCGGCCGAGCTCCTCTTCCTCCGTTCGATCCCTGCAGCCCCTGGACGCCCCGGTTCTACCTGGTTCAGCCCGAAACGTCTCCGAATTCCTAAAAATCCTAGGAGCATGAGCAGGTATTTAAACCCCTCTTCATCACTGAAGAAGGGATCCTGAAATTCATTCTCTAAACTCTCAACTTCCCCTCTTGCTCTTCCATTGGTTTTCTGACTTAAGCATCGGAGTCGGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTGCTTGTCTCGCAGGTCACGTCTTCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGACGGGTGAGTCTTCTGTCCGGATTTTGGCATCAATAGTTGGCGCCGTCTGTGGGAAGGAGTGTTGACTAGCAAACGTTGTACGTTACCGAAAGAGGCGTTAGCGAATAGATGGAGCGCAACAGTGAAGCAGCCGTAGGAGAGGTATGCCACCAGGCTCGACTTCAATCCCAAGAAGTCGAAATAGCAGCACTCAAAGGAAGGATGGATGATATAAGACAGAATCTTACGGAGATTTTGAGTTTATTGAAGAAACCCGAGTACTCGGGGAGCAAGGATGACCAACTGTGCAGGGACCCTAAAAAAGGAAAAGGAATGGCGGATGAGGAGGTGGGAGATTCAGCAAGTGTCACGAGCAGGATGCCGAGCTTAGAAGATGACTAGACTCATAAAGAGCCCGAGCCTAGTCGCAAGAAAGTTCGCAGAAGCTCGCCATCGAGACCAAAGCAAGGTACACATGTTAAAATCGATGGCAGGGAAAAATCCGAGGCACGGGAAAAGTTCGAGGCCGAGCATAGTCGAGGAGGGCGCGAGCAAGAGCTGTACAAATGGTTAAAGGAGGAGGATAGTCCTTACAACTCATATAAGAGGACAGGTAATGAGGATATAGAGGAACTGCTAGGAGAGATGGAGCCGCCCTTCACAGACAACATTATGGGGGCTGAAGTGCCGCAAAAGTTCAAGATACCCACCTTCCAATACGACGGAAAGAAAGATCCAGTCCAGCACTTGAATGCATAACTAACCTGGATGGACTTCCACTGGGCCAATGAGGCAACCAGATGCCGAGCCTTTGCACTTACCCTAACAGGCTTGGCTAGATAATGGTTTGGCAAAATACCGCGAAAGTTTATAGGGTCATTCAAAGAGTTGGCACGAGCCTTCGCCACACAGTTTTTGGGGGCTCGAGATCAACGAAAGCCACAGATCAACCTGCTGACAGTTAAACAAGGACCGAGGGAGAGCCTGAAGGACTATATCACCAGATTCAGTAACGAAGTCCTGCAAGTAGAGGGCTACGATGATGGAGTTGCACTAACTGCTGTGATTTCAGGATTACAAGATGAGGGGCTGCTTACCTCAATTGGAGAAAGTCAACCACGCACATACGTAGAATTCATGACTAGGGCACAAAAATTCATAAATGCTGAAGAGTTGCTCAAGTCAAAAAAGGAAACAATGACAACAGAATCCACAAAATATTCGGTATGTGAACAAGACAGAGACAAAGACCACAACCGCAAAAAACGGAGAACACATGACAATGATCGAGGGCGAGAAGACCCCATGGGTAAATTCAAAGAATACACCCCCACTTCCATTCAGCAGGAACAAATATTGATGGAGATTACAAATACGGATCTTCTGAGACATCTTGGAAAAATGAAAACAAGTCCAGAAGGAAGAGATAAAAGCCAATTTTGTCTTTTCCACAGGGACCACGGACACACTACCAAAAATTGCATCCAGCTTAAAGATGAGATTGAAACGCTGATTCGTCGTGGATTCCTCAAAGAGTTTGTTGAAGACAAGAACCAGAAAAGGCCGAGGCCGACCAGGGGTGGCCGAGGCCGAGGAGATGATGGACCTCCTTTAGAGATTAGAACCATCTTTTGA

mRNA sequence

ATGGGGCTTAGGATGGTTCTGTTGTTAATGCTCTGTTTGGGGAGCTTGATTCGAAGGTTATTCTTGGGATTCCGAGGCCTAAGCAGACTTAAGGAGACTGGTTCTTGCTCGAATTCAGAGTTGATTAAGGAGTGGTGGAAGTTTGTGTGGAGTAGGCAAGTTCCATCCAAAATCAAATTCTTTTGTTGGAGGCTCTATCATGATTATCTTCCTACTATGATCAATTTACAAAAAAGGGGGATGGAGGTTTCAGTGACCTGTCTGAGATGTCGAAGGGGCGAGGAATCTTCCTTTCATGCTATTTCTGACTGTAAATGGGTGAGGAAGCAGTGGAAGCTTTCACCGTTTGCTCCTATTTTCGAGTCTCAGGACTTAAAGTGTGCGGCTGATTTATTGTGGTGGTGTAGAAGCAACTTATCCCCGGCCAGCTTCGATGAGTTCGTGGGGCTGAGTTGGTGGATCTGGAATAGTAGGAATAAGGTGGTTCACTCCAAGGGTGAGACAGGCCTAGCAGTAGATGCGGCAACCAACAGAAATTCACAGTCAAGCGGTATAAGTGCGATAATTAGAGATGAGAGGGGGAAGATGATGCTTACGGCTTTGAAGTTTCTCCCCAATGTGACCGATGTTGATTCTGTCGAAGCCATGGCTATCAGAGATGGATTGATGGTTGCAAGGGACGCTGGATTTAGCAGGTTGGAGATCGAAACCGATTCAGCTCGTGTGGCAGCACTGATTTGTTCTGAGAAGGTGGATCTGTCGGAAGTTGGAGAGATTGTTCGTGAAGTCCGCCACCTCTTGAAGGGCTTTACCTTCTTCTCGATCAGGTGGTGTCGGAGGGAGGCGAACCAATTGGCTCATGCAGCGGCAAGGCTGGCGGTGGAGCAGGCAGTCGACGGTATCTGGATCGAGGAAGTGCCGTTACAGCTGGTAATTTTGGACCACTCCGAAGCACTAGGAGCTGATGGAGACAGCCGGGCAAAGATAGGGCGAGGAAACCGACCCAGAAGAAGACCGGACCAAAGGGTCGGGCCAAATGGTCCGCCTCTTGCCAAGGCCGAGGCTGAGCATAATGGTCGGCCTCTTGCCAAGGCCGAGGCCGACCATTCAGCCCGTTTGCGCGGCCGAGCTCCTCTTCCTCCGTTCGATCCCTGCAGCCCCTGGACGCCCCGGTTCTACCTGCATCGGAGTCGGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTGCTTGTCTCGCAGGTCACGTCTTCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGACGGATGGAGCGCAACAGTGAAGCAGCCGTAGGAGAGGTATGCCACCAGGCTCGACTTCAATCCCAAGAAGTCGAAATAGCAGCACTCAAAGGAAGGATGGATGATATAAGACAGAATCTTACGGAGATTTTGAGTTTATTGAAGAAACCCGAGTACTCGGGGAGCAAGGATGACCAACTGTGCAGGGACCCTAAAAAAGGAAAAGGAATGGCGGATGAGGAGCCCGAGCCTAGTCGCAAGAAAGTTCGCAGAAGCTCGCCATCGAGACCAAAGCAAGGTACACATGTTAAAATCGATGGCAGGGAAAAATCCGAGGCACGGGAAAAGTTCGAGGCCGAGCATAGTCGAGGAGGGCGCGAGCAAGAGCTGTACAAATGGTTAAAGGAGGAGGATAGTCCTTACAACTCATATAAGAGGACAGGGTCATTCAAAGAGTTGGCACGAGCCTTCGCCACACAGTTTTTGGGGGCTCGAGATCAACGAAAGCCACAGATCAACCTGCTGACAGTTAAACAAGGACCGAGGGAGAGCCTGAAGGACTATATCACCAGATTCAGTAACGAAGTCCTGCAAGTAGAGGGCTACGATGATGGAGTTGCACTAACTGCTGTGATTTCAGGATTACAAGATGAGGGGCTGCTTACCTCAATTGGAGAAAGTCAACCACGCACATACGTAGAATTCATGACTAGGGCACAAAAATTCATAAATGCTGAAGAGTTGCTCAAGTCAAAAAAGGAAACAATGACAACAGAATCCACAAAATATTCGGTATGTGAACAAGACAGAGACAAAGACCACAACCGCAAAAAACGGAGAACACATGACAATGATCGAGGGCGAGAAGACCCCATGGGTAAATTCAAAGAATACACCCCCACTTCCATTCAGCAGGAACAAATATTGATGGAGATTACAAATACGGATCTTCTGAGACATCTTGGAAAAATGAAAACAAGTCCAGAAGGAAGAGATAAAAGCCAATTTTGTCTTTTCCACAGGGACCACGGACACACTACCAAAAATTGCATCCAGCTTAAAGATGAGATTGAAACGCTGATTCGTCGTGGATTCCTCAAAGAGTTTGTTGAAGACAAGAACCAGAAAAGGCCGAGGCCGACCAGGGGTGGCCGAGGCCGAGGAGATGATGGACCTCCTTTAGAGATTAGAACCATCTTTTGA

Coding sequence (CDS)

ATGGGGCTTAGGATGGTTCTGTTGTTAATGCTCTGTTTGGGGAGCTTGATTCGAAGGTTATTCTTGGGATTCCGAGGCCTAAGCAGACTTAAGGAGACTGGTTCTTGCTCGAATTCAGAGTTGATTAAGGAGTGGTGGAAGTTTGTGTGGAGTAGGCAAGTTCCATCCAAAATCAAATTCTTTTGTTGGAGGCTCTATCATGATTATCTTCCTACTATGATCAATTTACAAAAAAGGGGGATGGAGGTTTCAGTGACCTGTCTGAGATGTCGAAGGGGCGAGGAATCTTCCTTTCATGCTATTTCTGACTGTAAATGGGTGAGGAAGCAGTGGAAGCTTTCACCGTTTGCTCCTATTTTCGAGTCTCAGGACTTAAAGTGTGCGGCTGATTTATTGTGGTGGTGTAGAAGCAACTTATCCCCGGCCAGCTTCGATGAGTTCGTGGGGCTGAGTTGGTGGATCTGGAATAGTAGGAATAAGGTGGTTCACTCCAAGGGTGAGACAGGCCTAGCAGTAGATGCGGCAACCAACAGAAATTCACAGTCAAGCGGTATAAGTGCGATAATTAGAGATGAGAGGGGGAAGATGATGCTTACGGCTTTGAAGTTTCTCCCCAATGTGACCGATGTTGATTCTGTCGAAGCCATGGCTATCAGAGATGGATTGATGGTTGCAAGGGACGCTGGATTTAGCAGGTTGGAGATCGAAACCGATTCAGCTCGTGTGGCAGCACTGATTTGTTCTGAGAAGGTGGATCTGTCGGAAGTTGGAGAGATTGTTCGTGAAGTCCGCCACCTCTTGAAGGGCTTTACCTTCTTCTCGATCAGGTGGTGTCGGAGGGAGGCGAACCAATTGGCTCATGCAGCGGCAAGGCTGGCGGTGGAGCAGGCAGTCGACGGTATCTGGATCGAGGAAGTGCCGTTACAGCTGGTAATTTTGGACCACTCCGAAGCACTAGGAGCTGATGGAGACAGCCGGGCAAAGATAGGGCGAGGAAACCGACCCAGAAGAAGACCGGACCAAAGGGTCGGGCCAAATGGTCCGCCTCTTGCCAAGGCCGAGGCTGAGCATAATGGTCGGCCTCTTGCCAAGGCCGAGGCCGACCATTCAGCCCGTTTGCGCGGCCGAGCTCCTCTTCCTCCGTTCGATCCCTGCAGCCCCTGGACGCCCCGGTTCTACCTGCATCGGAGTCGGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTGCTTGTCTCGCAGGTCACGTCTTCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGACGGATGGAGCGCAACAGTGAAGCAGCCGTAGGAGAGGTATGCCACCAGGCTCGACTTCAATCCCAAGAAGTCGAAATAGCAGCACTCAAAGGAAGGATGGATGATATAAGACAGAATCTTACGGAGATTTTGAGTTTATTGAAGAAACCCGAGTACTCGGGGAGCAAGGATGACCAACTGTGCAGGGACCCTAAAAAAGGAAAAGGAATGGCGGATGAGGAGCCCGAGCCTAGTCGCAAGAAAGTTCGCAGAAGCTCGCCATCGAGACCAAAGCAAGGTACACATGTTAAAATCGATGGCAGGGAAAAATCCGAGGCACGGGAAAAGTTCGAGGCCGAGCATAGTCGAGGAGGGCGCGAGCAAGAGCTGTACAAATGGTTAAAGGAGGAGGATAGTCCTTACAACTCATATAAGAGGACAGGGTCATTCAAAGAGTTGGCACGAGCCTTCGCCACACAGTTTTTGGGGGCTCGAGATCAACGAAAGCCACAGATCAACCTGCTGACAGTTAAACAAGGACCGAGGGAGAGCCTGAAGGACTATATCACCAGATTCAGTAACGAAGTCCTGCAAGTAGAGGGCTACGATGATGGAGTTGCACTAACTGCTGTGATTTCAGGATTACAAGATGAGGGGCTGCTTACCTCAATTGGAGAAAGTCAACCACGCACATACGTAGAATTCATGACTAGGGCACAAAAATTCATAAATGCTGAAGAGTTGCTCAAGTCAAAAAAGGAAACAATGACAACAGAATCCACAAAATATTCGGTATGTGAACAAGACAGAGACAAAGACCACAACCGCAAAAAACGGAGAACACATGACAATGATCGAGGGCGAGAAGACCCCATGGGTAAATTCAAAGAATACACCCCCACTTCCATTCAGCAGGAACAAATATTGATGGAGATTACAAATACGGATCTTCTGAGACATCTTGGAAAAATGAAAACAAGTCCAGAAGGAAGAGATAAAAGCCAATTTTGTCTTTTCCACAGGGACCACGGACACACTACCAAAAATTGCATCCAGCTTAAAGATGAGATTGAAACGCTGATTCGTCGTGGATTCCTCAAAGAGTTTGTTGAAGACAAGAACCAGAAAAGGCCGAGGCCGACCAGGGGTGGCCGAGGCCGAGGAGATGATGGACCTCCTTTAGAGATTAGAACCATCTTTTGA

Protein sequence

MGLRMVLLLMLCLGSLIRRLFLGFRGLSRLKETGSCSNSELIKEWWKFVWSRQVPSKIKFFCWRLYHDYLPTMINLQKRGMEVSVTCLRCRRGEESSFHAISDCKWVRKQWKLSPFAPIFESQDLKCAADLLWWCRSNLSPASFDEFVGLSWWIWNSRNKVVHSKGETGLAVDAATNRNSQSSGISAIIRDERGKMMLTALKFLPNVTDVDSVEAMAIRDGLMVARDAGFSRLEIETDSARVAALICSEKVDLSEVGEIVREVRHLLKGFTFFSIRWCRREANQLAHAAARLAVEQAVDGIWIEEVPLQLVILDHSEALGADGDSRAKIGRGNRPRRRPDQRVGPNGPPLAKAEAEHNGRPLAKAEADHSARLRGRAPLPPFDPCSPWTPRFYLHRSRCGKHHTGVQCLLVSQVTSSPSQTNLPLVAREGRMERNSEAAVGEVCHQARLQSQEVEIAALKGRMDDIRQNLTEILSLLKKPEYSGSKDDQLCRDPKKGKGMADEEPEPSRKKVRRSSPSRPKQGTHVKIDGREKSEAREKFEAEHSRGGREQELYKWLKEEDSPYNSYKRTGSFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVALTAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQDRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSPEGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTRGGRGRGDDGPPLEIRTIF

Homology

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BLAST of Spg011378 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-47
Identity = 114/251 (45.42%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SFK LARAF TQF+G R + +P   LLT+KQ   ESL+DY+ RF+ E LQVEG  D V+L
Sbjct: 254 SFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSL 313

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
            A +SG++DE L  S G+  P T+ E ++RAQ++++A E   SK+E       K +  ++
Sbjct: 314 LAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKRE----PDGKRTDPKR 373

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
           +R  D  +  R    +   ++DP  KF++YTPT++  EQ+LMEI +  LL+   +MK S 
Sbjct: 374 ERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASS 433

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTRGGRGRG 811
             R K ++CLFHRDHGH T++C  LK+E+E LIRRG+LKE+VE+     P+ T+   G  
Sbjct: 434 AKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEE-----PKATQ--NGES 493

Query: 812 DDGPPLEIRTI 823
           D  P  EIRTI
Sbjct: 494 DKSPAREIRTI 493

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BLAST of Spg011378 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 2.2e-42
Identity = 107/251 (42.63%), Postives = 156/251 (62.15%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SFK LARAF TQF+G R + +P   LLT+KQ   ESL DY+ RF+ E LQ+E   D V+L
Sbjct: 38  SFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIESLTDVVSL 97

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
            A +SG++DE L  S G+  P T+ E ++RAQ++++A E   SK+E       K +  ++
Sbjct: 98  LAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKRE----PDGKRTDQKR 157

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
           +R  D  +  R    +   ++DP  KF++YTPT++  EQ+LMEI +  LL+   +MK   
Sbjct: 158 ERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPS 217

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTRGGRGRG 811
             R K ++CLFHRDH H T++   LK+E+E LIRRG+L+E+VE+     P+ T+   G  
Sbjct: 218 TKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEE-----PKATQ--NGES 277

Query: 812 DDGPPLEIRTI 823
           +  P  EIRTI
Sbjct: 278 EKSPAREIRTI 277

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BLAST of Spg011378 vs. NCBI nr
Match: XP_024042801.1 (uncharacterized protein LOC112099618 [Citrus clementina])

HSP 1 Score: 176.8 bits (447), Expect = 7.7e-40
Identity = 92/222 (41.44%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SF +L++    QF+GARDQ+ P    L VKQG  ESLKD ITRF+ EV++VE Y D VAL
Sbjct: 60  SFAQLSQILVNQFVGARDQQFPPTYFLLVKQGKDESLKDCITRFNKEVVRVENYSDAVAL 119

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
           T ++ GLQ      S+ ++  RT+ E ++RAQK+ N +EL  +K+    ++S + +   +
Sbjct: 120 TTIMVGLQPGKFHYSLAKNPARTFTELLSRAQKYSNVDELTNAKRGA-NSDSPRVAEKRK 179

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
            +++    K++ +    +G +    +F  YTP ++ +EQ+LM+I N DLLR    +K +P
Sbjct: 180 IKEEQIKNKEKTSRLEKKGPKILQSRFPRYTPLNLPEEQVLMQIRNLDLLRKPKDIKIAP 239

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFV 794
             RD+S++C +HRDH H  ++C  LK+EI++LI+RG+LKEFV
Sbjct: 240 NRRDRSKYCRYHRDHRHNIEDCFDLKEEIKSLIQRGYLKEFV 280

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BLAST of Spg011378 vs. NCBI nr
Match: XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])

HSP 1 Score: 161.0 bits (406), Expect = 4.4e-35
Identity = 94/254 (37.01%), Postives = 153/254 (60.24%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SF +L+R F + F  AR + KP   LLTVKQ   E+L+DYI R++NE+ QV+GYDDG+AL
Sbjct: 251 SFGDLSREFTSHFRSARQRGKPVTYLLTVKQQEGETLRDYIRRYNNEITQVDGYDDGIAL 310

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
           + ++ GL+   L  S+ +  P +Y E + RA+K+ NAEE  K++ +    ESTK    + 
Sbjct: 311 SGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKYANAEERFKNRNQE-KGESTKGKKKKD 370

Query: 692 DRDK------DHNRKKRRTHDNDRG-----REDPMGKFKEYTPTSIQQEQILMEITNTDL 751
           D+ +      D + ++ +    +R      R     +F  +T  +  +EQILM++ N  L
Sbjct: 371 DQRERRVVRPDQSLRRNQFRPGERSEVRDTRPRLASQFTNFTELNTPREQILMQVRNPTL 430

Query: 752 LRHLGKMKTSPEGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFV---EDK- 811
            R    MKT+P  R+ +++C FH+DHGH T  C +LK++IE+L+R+G L+E+V   ED+ 
Sbjct: 431 FRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESLVRQGQLQEYVRNPEDRV 490

[Close]

BLAST of Spg011378 vs. NCBI nr
Match: XP_030923026.1 (uncharacterized protein LOC115949900 [Quercus lobata])

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-34
Identity = 89/260 (34.23%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           +F++L+ +F   F+G +  ++   +LLT+KQG +E+L+ Y+ RF+  +L+V+  DD V L
Sbjct: 101 NFEQLSNSFVRHFIGGQRPKRIADHLLTIKQGEKETLRSYVARFTRGMLEVDEVDDKVHL 160

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
           T   +GL+    + S+ ++ P+T  E + +AQK++NAEE L +      ++  K    + 
Sbjct: 161 TTFKAGLKSRDFVASLAKNPPKTMAEALLKAQKYMNAEEALAAIDGAEKSKEKKKEKEDD 220

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
            R +  +R  RR  + +R RED   +  ++TP ++  +QILMEI +   L+    + +SP
Sbjct: 221 RRGQKRDRADRRNDEGNRRREDKNPRLVKFTPLAVPVDQILMEIRDEPSLKWPRPLHSSP 280

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVE--DKNQKRPRPTRGGRG 811
              DK ++C FH+DHGH T++C  LK++IE LIR+G L+++V+  D ++   +   GG  
Sbjct: 281 SLHDKRKYCHFHKDHGHYTEDCRDLKEQIEELIRKGKLQQYVKRGDSSKHNQKGQHGGNK 340

Query: 812 RGDDGPPL-------EIRTI 823
           R +D P         EIRTI
Sbjct: 341 RDEDQPSPHPQNALGEIRTI 360

[Close]

BLAST of Spg011378 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-47
Identity = 114/251 (45.42%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SFK LARAF TQF+G R + +P   LLT+KQ   ESL+DY+ RF+ E LQVEG  D V+L
Sbjct: 254 SFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSL 313

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
            A +SG++DE L  S G+  P T+ E ++RAQ++++A E   SK+E       K +  ++
Sbjct: 314 LAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKRE----PDGKRTDPKR 373

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
           +R  D  +  R    +   ++DP  KF++YTPT++  EQ+LMEI +  LL+   +MK S 
Sbjct: 374 ERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASS 433

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTRGGRGRG 811
             R K ++CLFHRDHGH T++C  LK+E+E LIRRG+LKE+VE+     P+ T+   G  
Sbjct: 434 AKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEE-----PKATQ--NGES 493

Query: 812 DDGPPLEIRTI 823
           D  P  EIRTI
Sbjct: 494 DKSPAREIRTI 493

[Close]

BLAST of Spg011378 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.0e-42
Identity = 107/251 (42.63%), Postives = 156/251 (62.15%), Query Frame = 0


Query: 572 SFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVAL 631
           SFK LARAF TQF+G R + +P   LLT+KQ   ESL DY+ RF+ E LQ+E   D V+L
Sbjct: 38  SFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIESLTDVVSL 97

Query: 632 TAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCEQ 691
            A +SG++DE L  S G+  P T+ E ++RAQ++++A E   SK+E       K +  ++
Sbjct: 98  LAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKRE----PDGKRTDQKR 157

Query: 692 DRDKDHNRKKRRTHDNDRGREDPMGKFKEYTPTSIQQEQILMEITNTDLLRHLGKMKTSP 751
           +R  D  +  R    +   ++DP  KF++YTPT++  EQ+LMEI +  LL+   +MK   
Sbjct: 158 ERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPS 217

Query: 752 EGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTRGGRGRG 811
             R K ++CLFHRDH H T++   LK+E+E LIRRG+L+E+VE+     P+ T+   G  
Sbjct: 218 TKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEE-----PKATQ--NGES 277

Query: 812 DDGPPLEIRTI 823
           +  P  EIRTI
Sbjct: 278 EKSPAREIRTI 277

[Close]

BLAST of Spg011378 vs. ExPASy TrEMBL
Match: A0A2N9G9P2 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27208 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-36
Identity = 98/254 (38.58%), Postives = 147/254 (57.87%), Query Frame = 0


Query: 571 GSFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVA 630
           GSF +L+R F   F+G +   +P  +LL VKQ   E+L+ Y+TRF+ E L V+G DD V 
Sbjct: 340 GSFAQLSRLFFNHFIGGQRYGRPTTHLLNVKQKEGETLRSYLTRFNRETLLVDGADDKVV 399

Query: 631 LTAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCE 690
           LTA ISGLQ    L S+ +  P T  E M  AQ+++N EE L ++ +T+  +  K+   +
Sbjct: 400 LTAFISGLQAGDFLFSVYKDPPSTMTEMMYEAQRYMNGEEALLARDQTI-GKKRKWEHSD 459

Query: 691 QDRDKDHNRKKRRTHDNDRGREDPMG-----KFKEYTPTSIQQEQILMEITNTDLLRHLG 750
           +  +    R K + H N R +ED  G     +F  +TP +   + I M+I N   L+  G
Sbjct: 460 RPAESHETRPKAQRHRN-RRQEDRSGRGFNERFNHFTPLNAPVDHIFMQIRNDPALKWPG 519

Query: 751 KMKTSPEGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTR 810
           K+ T P+ R + ++C FHRDHGH T++C  LK +IE LI++G L+ FVE + Q+  RP  
Sbjct: 520 KLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKRQIEELIKQGKLQRFVE-RGQREGRP-- 579

Query: 811 GGRGRGDDGPPLEI 820
             +G     PP+E+
Sbjct: 580 --QGPRQQRPPVEV 586

[Close]

BLAST of Spg011378 vs. ExPASy TrEMBL
Match: A0A2N9F7K6 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10626 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-36
Identity = 98/254 (38.58%), Postives = 146/254 (57.48%), Query Frame = 0


Query: 571 GSFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVA 630
           GSF +L+R F   F+G +   +P  +LL VKQ   E+L+ Y+TRF+ E L V+G DD V 
Sbjct: 340 GSFAQLSRLFFNHFIGGQRYGRPTTHLLNVKQKEGETLRSYLTRFNRETLLVDGADDKVV 399

Query: 631 LTAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCE 690
           LTA ISGLQ    L S+ +  P T  E M  AQ+ +N EE L ++ +T+  +  K+   +
Sbjct: 400 LTAFISGLQAGDFLFSVYKDPPSTMTEMMYEAQRHMNGEEALLARDQTI-GKKRKWEHSD 459

Query: 691 QDRDKDHNRKKRRTHDNDRGREDPMG-----KFKEYTPTSIQQEQILMEITNTDLLRHLG 750
           +  +    R K + H N R +ED  G     +F  +TP +   + I M+I N   L+  G
Sbjct: 460 RPAESHETRPKAQRHRN-RRQEDRSGRGFNERFNHFTPLNAPVDHIFMQIRNDPALKWPG 519

Query: 751 KMKTSPEGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPTR 810
           K+ T P+ R + ++C FHRDHGH T++C  LK +IE LI++G L+ FVE + Q+  RP  
Sbjct: 520 KLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKRQIEELIKQGKLQRFVE-RGQREGRP-- 579

Query: 811 GGRGRGDDGPPLEI 820
             +G     PP+E+
Sbjct: 580 --QGPRQQRPPVEV 586

[Close]

BLAST of Spg011378 vs. ExPASy TrEMBL
Match: A0A2N9ESG4 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5492 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-35
Identity = 98/255 (38.43%), Postives = 145/255 (56.86%), Query Frame = 0


Query: 571 GSFKELARAFATQFLGARDQRKPQINLLTVKQGPRESLKDYITRFSNEVLQVEGYDDGVA 630
           GSF +L+R F   F+GA+   +P  +LL +KQ   E+L+ Y+TRF+ E L V+G DD V 
Sbjct: 451 GSFAQLSRLFFNHFIGAQRYGRPTTHLLNIKQKEGETLRSYLTRFNKETLLVDGADDKVV 510

Query: 631 LTAVISGLQDEGLLTSIGESQPRTYVEFMTRAQKFINAEELLKSKKETMTTESTKYSVCE 690
           LTA ISGLQ    L S+ +  P T  E M  AQ+ +N EE L ++ +T+     K     
Sbjct: 511 LTAFISGLQAGDFLFSVYKDPPSTMTEMMYEAQRHMNGEEALLARDQTV---GKKRKWEH 570

Query: 691 QDRDKD-HNRKKRRTHDNDRGREDPMG-----KFKEYTPTSIQQEQILMEITNTDLLRHL 750
            DR  + H+ + +   + +R  ED  G     +F  +TP +   + I M+I N   L+  
Sbjct: 571 PDRPAEPHDTRPKAQRNRNRKHEDRNGRGFNERFNHFTPLNAPVDHIFMQIRNDPALKWP 630

Query: 751 GKMKTSPEGRDKSQFCLFHRDHGHTTKNCIQLKDEIETLIRRGFLKEFVEDKNQKRPRPT 810
           GK+ T P+ R + ++C FHRDHGH T++C  LK +IE LI++G L+ FVE K Q+  RP 
Sbjct: 631 GKLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKRQIEELIKQGKLQRFVE-KGQREGRP- 690

Query: 811 RGGRGRGDDGPPLEI 820
              +G     PP+E+
Sbjct: 691 ---QGPRQQRPPVEV 697

[Close]

BLAST of Spg011378 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-10
Identity = 59/295 (20.00%), Postives = 112/295 (37.97%), Query Frame = 0


Query: 49  VWSRQVPSKIKFFCWRLYHDYLPTMINLQKRGMEVSVTCLRCRRGEESSFHAISDCKWVR 108
           +W  Q   KI+ F W+   + LP    L  R +     C+RC   +E+  H +  C + R
Sbjct: 257 IWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFAR 316

Query: 109 KQWKLSPF-APIFESQDLKCAADLLWWCRSNLSPASFDE----FVGLSWWIWNSRNKVVH 168
             W +S    P+          +L W          +++       L W +W +RN++V 
Sbjct: 317 LTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVF 376

Query: 169 -----------SKGETGLA------------------------------------VDAAT 228
                       + E  L                                      DA  
Sbjct: 377 RGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATW 436

Query: 229 NRNSQSSGISAIIRDERGKMMLTALKFLPNVTDVDSVEAMAIRDGLMVARDAGFSRLEIE 288
           NR+++  GI  ++R+E+G++     + LP +  V   E  A+R  ++      ++ +  E
Sbjct: 437 NRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFE 496

Query: 289 TDSARVAALICSEKVDLSEVGEIVREVRHLLKGFTFFSIRWCRREANQLAHAAAR 292
           +DS  +  ++ ++++    +   +++++ LL  FT     +  RE N LA   AR
Sbjct: 497 SDSQVLIEILNNDEI-WPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVAR 550

The following BLAST results are available for this feature:

BLAST of Spg011378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	2.9e-47	45.42	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	2.2e-42	42.63	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_024042801.1	7.7e-40	41.44	uncharacterized protein LOC112099618 [Citrus clementina]	[more]
XP_024041095.1	4.4e-35	37.01	uncharacterized protein LOC112098853 [Citrus clementina]	[more]
XP_030923026.1	3.7e-34	34.23	uncharacterized protein LOC115949900 [Quercus lobata]	[more]

BLAST of Spg011378 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg011378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.4e-47	45.42	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	1.0e-42	42.63	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A2N9G9P2	1.1e-36	38.58	Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27208 PE=4 SV=1	[more]
A0A2N9F7K6	3.3e-36	38.58	Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10626 PE=4 SV=1	[more]
A0A2N9ESG4	1.2e-35	38.43	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5492 PE=4 SV=1	[more]

BLAST of Spg011378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	5.2e-10	20.00	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 449..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 794..815
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..513
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 682..718
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..718
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 794..823
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 165..309
None	No IPR available	PANTHER	PTHR47723:SF1	OS05G0353850 PROTEIN	coord: 165..309
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 554..640 e-value: 2.7E-7 score: 30.8
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 172..293 e-value: 1.5E-27 score: 95.8
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 43..111 e-value: 1.5E-16 score: 60.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 169..300 e-value: 2.8E-16 score: 61.7
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 172..291 e-value: 8.86448E-20 score: 83.9028
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 171..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011378.1	Spg011378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity