Spg011373 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011373
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribose-5-phosphate isomerase
Location	scaffold8: 10281870 .. 10282346 (+)
RNA-Seq Expression	Spg011373
Synteny	Spg011373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATTCCTTATTTCCCCAAATTCATGGCGTCAGACAAATCTGCCATGTCCGCCGCCCTTCTTGTTCCTTCTTCTACACCTCTCTCTCCTCCCATTTTCACCCAAGACGATTTCAAGAAGGTTGCGGCCTACAAGGCCGTCGAATTCGTTCAGTCCGGTATGGTCCTAGGGCTCGAAACCGGCTCCACGGCCAAGCACGCGGTCGACCGGATGGGCGAGCTTCTCCGCCAGGGCAAGCTCAAGGAAATCGTCGAAATACCGACCTCCAAAAAGACCTACGAGCAAGCCGTCTCGTTGGGAATCCCCTTGTCCGATCTCGATTCGCATCCCGTCATCGATCTCGCCATCGACGGCGCCCACATGGTCGAATGTGTTTGTAAAAAGTTTATAGTCATCGTCGACGAGTCCAAGCTCGCCGAGTTCATCGGCGGTAGTGGCCTCGCAATGCCCATCGAGGTTGTGCCGTATTGCTAG

mRNA sequence

ATGCCCATTCCTTATTTCCCCAAATTCATGGCGTCAGACAAATCTGCCATGTCCGCCGCCCTTCTTGTTCCTTCTTCTACACCTCTCTCTCCTCCCATTTTCACCCAAGACGATTTCAAGAAGGTTGCGGCCTACAAGGCCGTCGAATTCGTTCAGTCCGGTATGGTCCTAGGGCTCGAAACCGGCTCCACGGCCAAGCACGCGGTCGACCGGATGGGCGAGCTTCTCCGCCAGGGCAAGCTCAAGGAAATCGTCGAAATACCGACCTCCAAAAAGACCTACGAGCAAGCCGTCTCGTTGGGAATCCCCTTGTCCGATCTCGATTCGCATCCCGTCATCGATCTCGCCATCGACGGCGCCCACATGGTCGAATGTGTTTGTAAAAAGTTTATAGTCATCGTCGACGAGTCCAAGCTCGCCGAGTTCATCGGCGGTAGTGGCCTCGCAATGCCCATCGAGGTTGTGCCGTATTGCTAG

Coding sequence (CDS)

ATGCCCATTCCTTATTTCCCCAAATTCATGGCGTCAGACAAATCTGCCATGTCCGCCGCCCTTCTTGTTCCTTCTTCTACACCTCTCTCTCCTCCCATTTTCACCCAAGACGATTTCAAGAAGGTTGCGGCCTACAAGGCCGTCGAATTCGTTCAGTCCGGTATGGTCCTAGGGCTCGAAACCGGCTCCACGGCCAAGCACGCGGTCGACCGGATGGGCGAGCTTCTCCGCCAGGGCAAGCTCAAGGAAATCGTCGAAATACCGACCTCCAAAAAGACCTACGAGCAAGCCGTCTCGTTGGGAATCCCCTTGTCCGATCTCGATTCGCATCCCGTCATCGATCTCGCCATCGACGGCGCCCACATGGTCGAATGTGTTTGTAAAAAGTTTATAGTCATCGTCGACGAGTCCAAGCTCGCCGAGTTCATCGGCGGTAGTGGCCTCGCAATGCCCATCGAGGTTGTGCCGTATTGCTAG

Protein sequence

MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGAHMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC

Homology

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BLAST of Spg011373 vs. NCBI nr
Match: KAG6601846.1 (putative ribose-5-phosphate isomerase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6601854.1 putative ribose-5-phosphate isomerase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032553.1 putative ribose-5-phosphate isomerase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 136/178 (76.40%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M A LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVAPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSKKTY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. NCBI nr
Match: XP_022922027.1 (probable ribose-5-phosphate isomerase 2 [Cucurbita moschata])

HSP 1 Score: 258.8 bits (660), Expect = 3.0e-65
Identity = 135/178 (75.84%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M   LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVGPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSKKTY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. NCBI nr
Match: XP_022990542.1 (probable ribose-5-phosphate isomerase 2 [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 3.0e-65
Identity = 135/178 (75.84%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M   LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVGPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSKKTY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. NCBI nr
Match: XP_022152272.1 (probable ribose-5-phosphate isomerase 2 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 137/182 (75.27%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLS----PPIFTQDDFKKVAAYKAVEFVQSGMV 60
           M IPYFPKFM SDKS M+A LL+PSS PLS    PPI TQD+ KK+AAYKAVE+V+SGMV
Sbjct: 1   MAIPYFPKFMGSDKSPMAAGLLIPSSAPLSSPLAPPILTQDELKKIAAYKAVEYVRSGMV 60

Query: 61  LGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLA 120
           LGL TGSTAKHAVDR+ ELLRQGKLK+IV IPTSKKTYEQAVSLGIPLSDLDSHPVIDLA
Sbjct: 61  LGLGTGSTAKHAVDRIAELLRQGKLKDIVGIPTSKKTYEQAVSLGIPLSDLDSHPVIDLA 120

Query: 121 IDGA--------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVP 159
           IDGA                     MVECVCKKFIVIVDESKL EFIGGSGLAMP+EVVP
Sbjct: 121 IDGADEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVEFIGGSGLAMPVEVVP 180

[Close]

BLAST of Spg011373 vs. NCBI nr
Match: XP_023526434.1 (probable ribose-5-phosphate isomerase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 134/178 (75.28%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M   LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVGPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSK TY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKNTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. ExPASy Swiss-Prot
Match: Q9ZU38 (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.0e-49
Identity = 105/178 (58.99%), Postives = 129/178 (72.47%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M + Y P F+ SDKS  +  +   +S+P  P   TQD+ K++AAYKAVEFV+SGMVLGL 
Sbjct: 1   MALAYDPLFITSDKSLSAFDV---ASSPPQPMNLTQDELKRIAAYKAVEFVESGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTAKHAVDR+GELLRQGKL+ IV IPTSKKT EQA+SLGIPLSDLD+HPVIDL+IDGA
Sbjct: 61  TGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                M+E   KKF+VIVD+SK+ + IGGS LA+P+E+VP+C
Sbjct: 121 DEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFC 175

[Close]

BLAST of Spg011373 vs. ExPASy Swiss-Prot
Match: Q9C998 (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 23  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLK 82
           V S+ PLS    TQ++ KK+AAYKAVEFV+SGMV+GL TGSTAKHAV R+ ELLR+GKLK
Sbjct: 18  VNSAPPLSN--LTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLK 77

Query: 83  EIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA--------------------HM 142
           +I+ IPTS  T+EQAVSLGIPLSDLDSHPV+DL+IDGA                     M
Sbjct: 78  DIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKM 137

Query: 143 VECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
           +E   KKF+VIVDESKL ++IGGSGLA+P+EVVP+C
Sbjct: 138 IEGASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFC 171

[Close]

BLAST of Spg011373 vs. ExPASy Swiss-Prot
Match: Q9S726 (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI3 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.7e-35
Identity = 82/144 (56.94%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 35  TQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTY 94
           +QDD KK+AA KAVE ++ GMVLGL TGSTA  AVD++G+LL  G+L +IV IPTSK+T 
Sbjct: 44  SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 103

Query: 95  EQAVSLGIPLSDLDSHPVIDLAIDGA--------------------HMVECVCKKFIVIV 154
           EQA SLGIPL  LD+HP IDLAIDGA                     MVE V  KFIV+ 
Sbjct: 104 EQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVA 163

Query: 155 DESKLAEFIGGSGLAMPIEVVPYC 159
           D++KL   +GGSGLAMP+EVV +C
Sbjct: 164 DDTKLVTGLGGSGLAMPVEVVQFC 187

[Close]

BLAST of Spg011373 vs. ExPASy Swiss-Prot
Match: B8FL28 (Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rpiA PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-23
Identity = 65/143 (45.45%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 35  TQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTY 94
           +QD  KK AA KAVE+++SGMV+GL +GSTA  A+  +  L+++GKLK+IV IP+S  T 
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 95  EQAVSLGIPLSDLDSHPVIDLAIDGA--------------------HMVECVCKKFIVIV 154
           E A SLGIPL   + H VID+ IDGA                     +V    KK I+IV
Sbjct: 63  EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122

Query: 155 DESKLAEFIGGSGLAMPIEVVPY 158
           DESK+++ + G+  A+P+EVVP+
Sbjct: 123 DESKISDKL-GTIFALPVEVVPF 144

[Close]

BLAST of Spg011373 vs. ExPASy Swiss-Prot
Match: A7HS32 (Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=rpiA PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 37  DDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQ 96
           DD KK AA +A+EFV+ GM LG+ TGSTA+H V  +GE ++ G   +IV +PTS++T + 
Sbjct: 4   DDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAG--LDIVGVPTSERTAKL 63

Query: 97  AVSLGIPLSDLDSHPVIDLAIDGA--------------------HMVECVCKKFIVIVDE 156
           A SLGIPL++LD  P +D+ +DGA                     +V     + IVI D 
Sbjct: 64  AASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVIADA 123

Query: 157 SKLAEFIGGSGLAMPIEVVPY 158
           SKL + +G     +P+EV+P+
Sbjct: 124 SKLVKTLG--SFPLPVEVIPF 140

[Close]

BLAST of Spg011373 vs. ExPASy TrEMBL
Match: A0A6J1JJ21 (Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111487388 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 135/178 (75.84%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M   LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVGPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSKKTY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. ExPASy TrEMBL
Match: A0A6J1E1Z2 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111430098 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 135/178 (75.84%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY PKF+ASD S+M   LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPKFIASDTSSMVGPLLAPSSAPLSPPIFTQDDFKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTA+HAVDR+G+LLRQGKLK+IV IPTSKKTY+QAVSLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTARHAVDRIGDLLRQGKLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL +FIGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVDFIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. ExPASy TrEMBL
Match: A0A6J1DFR1 (Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111020035 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.2e-65
Identity = 137/182 (75.27%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLS----PPIFTQDDFKKVAAYKAVEFVQSGMV 60
           M IPYFPKFM SDKS M+A LL+PSS PLS    PPI TQD+ KK+AAYKAVE+V+SGMV
Sbjct: 1   MAIPYFPKFMGSDKSPMAAGLLIPSSAPLSSPLAPPILTQDELKKIAAYKAVEYVRSGMV 60

Query: 61  LGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLA 120
           LGL TGSTAKHAVDR+ ELLRQGKLK+IV IPTSKKTYEQAVSLGIPLSDLDSHPVIDLA
Sbjct: 61  LGLGTGSTAKHAVDRIAELLRQGKLKDIVGIPTSKKTYEQAVSLGIPLSDLDSHPVIDLA 120

Query: 121 IDGA--------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVP 159
           IDGA                     MVECVCKKFIVIVDESKL EFIGGSGLAMP+EVVP
Sbjct: 121 IDGADEVDPDLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVEFIGGSGLAMPVEVVP 180

[Close]

BLAST of Spg011373 vs. ExPASy TrEMBL
Match: A0A6J1K2H6 (Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111489500 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 132/178 (74.16%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY P FM SD   M+AALL+PSS PLS PIF+QDD+KK AAYKAVEFVQSGMVLGL 
Sbjct: 1   MAIPYLPNFMGSDTPPMAAALLLPSSVPLSQPIFSQDDYKKAAAYKAVEFVQSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTAKHAVDR+ ELLRQG LK+IV IPTSKKTY+QA SLGIPLSDLDSHPVIDLAIDGA
Sbjct: 61  TGSTAKHAVDRIAELLRQGTLKDIVGIPTSKKTYDQAFSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL E+IGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPHLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVEYIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. ExPASy TrEMBL
Match: A0A6J1FKP8 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111445096 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 132/178 (74.16%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M IPY P FM SD   M+AALL+PSS PLSPPIF+QDD+KK AAYKAVEFV SGMVLGL 
Sbjct: 1   MAIPYLPNFMGSDNPPMAAALLLPSSVPLSPPIFSQDDYKKAAAYKAVEFVHSGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTAKHAVDR+ ELLRQG LK+IV IPTSKKTY+QAVSLGIPLSDLDSH VIDLAIDGA
Sbjct: 61  TGSTAKHAVDRIAELLRQGTLKDIVGIPTSKKTYDQAVSLGIPLSDLDSHHVIDLAIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                MVECVCKKFIVIVDESKL E+IGGSGLAMP+EVVPYC
Sbjct: 121 DEVDPHLNLVKGRGGSLLREKMVECVCKKFIVIVDESKLVEYIGGSGLAMPVEVVPYC 178

[Close]

BLAST of Spg011373 vs. TAIR 10
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2 )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 105/178 (58.99%), Postives = 129/178 (72.47%), Query Frame = 0


Query: 1   MPIPYFPKFMASDKSAMSAALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLE 60
           M + Y P F+ SDKS  +  +   +S+P  P   TQD+ K++AAYKAVEFV+SGMVLGL 
Sbjct: 1   MALAYDPLFITSDKSLSAFDV---ASSPPQPMNLTQDELKRIAAYKAVEFVESGMVLGLG 60

Query: 61  TGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA 120
           TGSTAKHAVDR+GELLRQGKL+ IV IPTSKKT EQA+SLGIPLSDLD+HPVIDL+IDGA
Sbjct: 61  TGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGA 120

Query: 121 --------------------HMVECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
                                M+E   KKF+VIVD+SK+ + IGGS LA+P+E+VP+C
Sbjct: 121 DEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFC 175

[Close]

BLAST of Spg011373 vs. TAIR 10
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 23  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLK 82
           V S+ PLS    TQ++ KK+AAYKAVEFV+SGMV+GL TGSTAKHAV R+ ELLR+GKLK
Sbjct: 18  VNSAPPLSN--LTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLK 77

Query: 83  EIVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGA--------------------HM 142
           +I+ IPTS  T+EQAVSLGIPLSDLDSHPV+DL+IDGA                     M
Sbjct: 78  DIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKM 137

Query: 143 VECVCKKFIVIVDESKLAEFIGGSGLAMPIEVVPYC 159
           +E   KKF+VIVDESKL ++IGGSGLA+P+EVVP+C
Sbjct: 138 IEGASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFC 171

[Close]

BLAST of Spg011373 vs. TAIR 10
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 147.9 bits (372), Expect = 6.9e-36
Identity = 82/144 (56.94%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 35  TQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKEIVEIPTSKKTY 94
           +QDD KK+AA KAVE ++ GMVLGL TGSTA  AVD++G+LL  G+L +IV IPTSK+T 
Sbjct: 44  SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 103

Query: 95  EQAVSLGIPLSDLDSHPVIDLAIDGA--------------------HMVECVCKKFIVIV 154
           EQA SLGIPL  LD+HP IDLAIDGA                     MVE V  KFIV+ 
Sbjct: 104 EQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVA 163

Query: 155 DESKLAEFIGGSGLAMPIEVVPYC 159
           D++KL   +GGSGLAMP+EVV +C
Sbjct: 164 DDTKLVTGLGGSGLAMPVEVVQFC 187

[Close]

BLAST of Spg011373 vs. TAIR 10
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.7e-07
Identity = 31/101 (30.69%), Postives = 48/101 (47.52%), Query Frame = 0


Query: 24  PSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLETGSTAKHAVDRMGELLRQGKLKE 83
           P    LSP +       + A +    +V+SGM++GL +G  +  A+  +G+ L  G L  
Sbjct: 28  PVCASLSPEV---SPLLRAAHHTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHN 87

Query: 84  IVEIPTSKKTYEQAVSLGIPLSDLDSHPVIDLAIDGAHMVE 125
           +V +P S ++  +A   GIPL        ID A   A  VE
Sbjct: 88  VVGVPMSARSASEAAKYGIPLEYYRDGVQIDFAFHDADAVE 125

The following BLAST results are available for this feature:

BLAST of Spg011373 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601846.1	1.0e-65	76.40	putative ribose-5-phosphate isomerase 2, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022922027.1	3.0e-65	75.84	probable ribose-5-phosphate isomerase 2 [Cucurbita moschata]	[more]
XP_022990542.1	3.0e-65	75.84	probable ribose-5-phosphate isomerase 2 [Cucurbita maxima]	[more]
XP_022152272.1	6.6e-65	75.27	probable ribose-5-phosphate isomerase 2 [Momordica charantia]	[more]
XP_023526434.1	1.1e-64	75.28	probable ribose-5-phosphate isomerase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg011373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU38	9.0e-49	58.99	Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 ...	[more]
Q9C998	1.6e-45	62.82	Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 ...	[more]
Q9S726	9.7e-35	56.94	Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana O...	[more]
B8FL28	1.7e-23	45.45	Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 G...	[more]
A7HS32	2.0e-19	40.43	Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DS...	[more]

BLAST of Spg011373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJ21	1.4e-65	75.84	Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111487388 PE=3 SV...	[more]
A0A6J1E1Z2	1.4e-65	75.84	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111430098 PE=3 ...	[more]
A0A6J1DFR1	3.2e-65	75.27	Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111020035 PE=3...	[more]
A0A6J1K2H6	3.0e-63	74.16	Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111489500 PE=3 SV...	[more]
A0A6J1FKP8	3.0e-63	74.16	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111445096 PE=3 ...	[more]

BLAST of Spg011373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01290.1	6.4e-50	58.99	ribose-5-phosphate isomerase 2	[more]
AT1G71100.1	1.1e-46	62.82	Ribose 5-phosphate isomerase, type A protein	[more]
AT3G04790.1	6.9e-36	56.94	Ribose 5-phosphate isomerase, type A protein	[more]
AT5G44520.1	6.7e-07	30.69	NagB/RpiA/CoA transferase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1360		coord: 34..125 e-value: 1.2E-29 score: 104.7
None	No IPR available	PANTHER	PTHR43748	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 2..122
None	No IPR available	PANTHER	PTHR43748:SF5	ISOMERASE, PUTATIVE-RELATED	coord: 121..158
None	No IPR available	PANTHER	PTHR43748:SF5	ISOMERASE, PUTATIVE-RELATED	coord: 2..122
None	No IPR available	PANTHER	PTHR43748	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 121..158
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 87..124 e-value: 4.1E-8 score: 33.0
IPR004788	Ribose 5-phosphate isomerase, type A	CDD	cd01398	RPI_A	coord: 40..158 e-value: 1.34906E-45 score: 146.463
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 35..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011373.1	Spg011373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity