Spg011006 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011006
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 25138802 .. 25141199 (-)
RNA-Seq Expression	Spg011006
Synteny	Spg011006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGTTCGTCTACGCCAAGGAGGTTCACGCGCCAAACCCAAAAGCCCGCCACTCAACAGTTTAGAAAACGATCGCGGGAGTGGTTTGAAATGATCCGAGAGATGGGAGCCAAGAGACGTGCTGCCCTTGAAGAAGAAGGAAGTAGGCAAGATGAAGAAAAAGTCACCAAGGTAGCTGAAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCGAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAGCCCGTTGTTACTTATAGCGCAAGAAAGAGGAGCCCGAAAAAGGTTGTGTCTGAAGAGCCGCTGAAAATTAAGCCCCTCAAAACCGTAAGGATGCCTCCGGATGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTTCTGAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCCGAGAGAGAGATGGAAAAACAGAAAATGGCTGAGGAAGATGAGTTTGCGAAGGAAAGAGATGAGAAAGATGAGAAAATAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTATGAGGAAAACCTCGGGAGAGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAGAGAAGGAAGGAAGCGGAAGACTTCCTTGTAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTGCAAGGAAGGGTTGAAGAAGAGGCCCAACAGGGGCCAACTGAATAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCGCATCTGGGCCACATTCTGCTGAAGGCCTAGCCGAGGCCACTTTCGATCAGCCAGCTGAAGAGGTTTTCGAGCCTCTATTCACAAATGACCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTTGAAGAAGAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGACTCTGATACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCGTTGAGAAGAAAGAGAAAGAGAGAGATTAAGGCTGAAAGGAGGACACAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGTAGTTCCTCCTACTACCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAATCCATTTCCTGAGGTATTTAGAGATGTTAATTTTTCAGGAAAGGATGGAGATAATGAGAAAGAGAGATTTCCTCAATGAAACGGGATTCTCTAACAGAGCTGGAGCACTGCCAGAGATCGTGAGTAGGATCATATCTCAATACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCAAGAATTTTACGTTGGCCTGAGGGAGGAGAGTATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAACAAGGTGTACAGGATCAAGGCGCCCTTGAACCCAAGAGGGAACGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGTTCTAAACTTGTGGCCAATAAGGGGGTTCAATGGAAAGAATCACAGACGAAAGTGAAGTTGTTAGTGCCAAGCGACCTATAGCCAGAATTGGCAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCATGACAGCACGATTTCAGTGGATAGGGTGATGCTTCTCTATTGCCTTATGAATGGGGTTGGAGATCAATGTGGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGCCAAAGGGTGAAGATCATGTCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGCATAACAGTATCCAGAGGGAAGACAAAGCCTTTACATCTCAGGCTACTCCACCTACAGGGTCGAACGTAGCTTCTCCATCCTAGCACACTCCTTTTACAGGGCCTTCACCAGCATCAGATGCCCTAGGTATGGTCCACCACCAGTTAGATCAAATCAGGGACAACCTGAGAACGTATTGGGCGTATGCAAAGGTGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATAGCCCCGAGCATTGCTCCAGTCTTTCCTGAATTCCCTCGATCATTGCTGCCAAAGGAGGATGAAGATTCTGATGAAGAGGAGGAAGAAAATGATGATGAAGATGATGAAGAGAGAGAGAGTTCCTCAGATGAGGACTAA

mRNA sequence

ATGCCGAGTTCGTCTACGCCAAGGAGGTTCACGCGCCAAACCCAAAAGCCCGCCACTCAACAGTTTAGAAAACGATCGCGGGAGTGGTTTGAAATGATCCGAGAGATGGGAGCCAAGAGACGTGCTGCCCTTGAAGAAGAAGGAAGTAGGCAAGATGAAGAAAAAGTCACCAAGGTAGCTGAAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCGAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAGCCCGTTGTTACTTATAGCGCAAGAAAGAGGAGCCCGAAAAAGGTTGTGTCTGAAGAGCCGCTGAAAATTAAGCCCCTCAAAACCGTAAGGATGCCTCCGGATGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTTCTGAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCCGAGAGAGAGATGGAAAAACAGAAAATGGCTGAGGAAGATGAGTTTGCGAAGGAAAGAGATGAGAAAGATGAGAAAATAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTATGAGGAAAACCTCGGGAGAGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAGAGAAGGAAGGAAGCGGAAGACTTCCTTGTAGCCTTTGAGCCACTCCACAAGGCTCAAAAAGTGGAGAATGAAGGCCAGAATGCGACCGCATCTGGGCCACATTCTGCTGAAGGCCTAGCCGAGGCCACTTTCGATCAGCCAGCTGAAGAGGTTTTCGAGCCTCTATTCACAAATGACCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTTGAAGAAGAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGACTCTGATACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCGTTGAGAAGAAAGAGAAAGAGAGAGATTAAGGCTGAAAGGAGGACACAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGTAGTTCCTCCTACTACCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAATCCATTTCCTGAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCAAGAATTTTACGTTGGCCTGAGGGAGGAGAGTATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAACAAGGTGTACAGGATCAAGGCGCCCTTGAACCCAAGAGGGAACGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAATCAATGTGGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGCCAAAGGGTGAAGATCATGTCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGCATAACAGGCCTTCACCAGCATCAGATGCCCTAGGTATGGTCCACCACCAGTTAGATCAAATCAGGGACAACCTGAGAACGTATTGGGCGTATGCAAAGGTGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATAGCCCCGAGCATTGCTCCAGTCTTTCCTGAATTCCCTCGATCATTGCTGCCAAAGGAGGATGAAGATTCTGATGAAGAGGAGGAAGAAAATGATGATGAAGATGATGAAGAGAGAGAGAGTTCCTCAGATGAGGACTAA

Coding sequence (CDS)

ATGCCGAGTTCGTCTACGCCAAGGAGGTTCACGCGCCAAACCCAAAAGCCCGCCACTCAACAGTTTAGAAAACGATCGCGGGAGTGGTTTGAAATGATCCGAGAGATGGGAGCCAAGAGACGTGCTGCCCTTGAAGAAGAAGGAAGTAGGCAAGATGAAGAAAAAGTCACCAAGGTAGCTGAAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCGAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAGCCCGTTGTTACTTATAGCGCAAGAAAGAGGAGCCCGAAAAAGGTTGTGTCTGAAGAGCCGCTGAAAATTAAGCCCCTCAAAACCGTAAGGATGCCTCCGGATGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTTCTGAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCCGAGAGAGAGATGGAAAAACAGAAAATGGCTGAGGAAGATGAGTTTGCGAAGGAAAGAGATGAGAAAGATGAGAAAATAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTATGAGGAAAACCTCGGGAGAGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAGAGAAGGAAGGAAGCGGAAGACTTCCTTGTAGCCTTTGAGCCACTCCACAAGGCTCAAAAAGTGGAGAATGAAGGCCAGAATGCGACCGCATCTGGGCCACATTCTGCTGAAGGCCTAGCCGAGGCCACTTTCGATCAGCCAGCTGAAGAGGTTTTCGAGCCTCTATTCACAAATGACCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTTGAAGAAGAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGACTCTGATACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCGTTGAGAAGAAAGAGAAAGAGAGAGATTAAGGCTGAAAGGAGGACACAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGTAGTTCCTCCTACTACCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAATCCATTTCCTGAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCAAGAATTTTACGTTGGCCTGAGGGAGGAGAGTATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAACAAGGTGTACAGGATCAAGGCGCCCTTGAACCCAAGAGGGAACGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAATCAATGTGGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGCCAAAGGGTGAAGATCATGTCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGCATAACAGGCCTTCACCAGCATCAGATGCCCTAGGTATGGTCCACCACCAGTTAGATCAAATCAGGGACAACCTGAGAACGTATTGGGCGTATGCAAAGGTGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATAGCCCCGAGCATTGCTCCAGTCTTTCCTGAATTCCCTCGATCATTGCTGCCAAAGGAGGATGAAGATTCTGATGAAGAGGAGGAAGAAAATGATGATGAAGATGATGAAGAGAGAGAGAGTTCCTCAGATGAGGACTAA

Protein sequence

MPSSSTPRRFTRQTQKPATQQFRKRSREWFEMIREMGAKRRAALEEEGSRQDEEKVTKVAESSRQGEASMGKVSEPSTNPSLSCRTKPVVTYSARKRSPKKVVSEEPLKIKPLKTVRMPPDVFEGIIRQAVAKALAISEGYKAEQDALKEVEAEREMEKQKMAEEDEFAKERDEKDEKIRREEEQEAERALEAEEERKYEENLGRAAMDLQLLEEEKKRREEIKEDEKRRKEAEDFLVAFEPLHKAQKVENEGQNATASGPHSAEGLAEATFDQPAEEVFEPLFTNDPPAADSTSSGEKRVEEEKEDEEAETSSDSDSDTESDSEIRELDGDQVPISAALRRKRKREIKAERRTQNKNDPIFAKRPRTRSMDASPVVPPTTSPAKPKGKSPKAASPRNPFPEEFCAHPQEAVVPLVQEFYVGLREESISMAVVRGKMVSFSSVDINKVYRIKAPLNPRGNDVIRNPSAKQMKEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIMSGKDEERHFFKSTIDLSLIGKLQHNRPSPASDALGMVHHQLDQIRDNLRTYWAYAKVRDEAIREFYLSIAPSIAPVFPEFPRSLLPKEDEDSDEEEEENDDEDDEERESSSDED

Homology

The following BLAST results are available for this feature:

BLAST of Spg011006 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011006 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011006 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011006 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..625
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..625
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011006.1	Spg011006.1	mRNA