Spg010877 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010877
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 6511347 .. 6513185 (+)
RNA-Seq Expression	Spg010877
Synteny	Spg010877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAAGCCCTATTTATTCAAGACCCTTGGTAAGTTTCGTTTCACTTCGTCTTCTTGCCTTCATTCTTTGCCATTTTTATTCTCTCCCTTGCTTCCGATTACTGTGAAATTTTCCAAGTCTGAAATGGCTAAAACAAAAGGGAGGAAAGAGAGAGATACTGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACAAAAGCAAAGAGAAGGAAGACGCCCGAAGAGAGAGGCTAAGAGACGAAGAAGACAACAGAGAGCTGAGGTTACGGAAGTAGTGAGGAAGGTTATTCAGGACATTGCTGATGACGCAGTTGAAGAAGAGGAACCAAAGGAACCTGAGGAAAAGACAGATGCTGAACAGAGTGATCCGATAGTGGAAAATCCGCAAGAGGTGCAAGAGAAGCAAGCAGAAGATATGCAAGAACAAGGAAACGGTCAAGAGCAGCAGGTTCAAACTGAAGAAATTGTGCCGGAGGTTCCATGTCGTCGCCGCCGCAAGTAGAAGGCTGGGCGAATCAAGGTGATCCGGACAAACACTCCATCGTTGTCGACGACAGAATCTGAGAAAGAAAATTCTGAGGAAGAAGAACAAGAGAAAGAAGGGGCAGAGGACCAAGAGAGAGAAGAAACAAAAAAGAAAGCAGAGGAAGGAGCTTTGACGAAGCATCAAGAAGACAAGGGCAAGGGAGTTGCCGAAGCAACGGATGAAGCAGAAGAGGAAGAATCAGGAATGCCATTCATTCGCTTCGTCAATGAGCTTGCCAAAGCAAAATATAGGGAGATGCTAAAAAGGGATTTCTTATTTGAAAGAGGCTTCGGTTAAGATTTACCACATTTCTTGAGGGCTAGAATAGAGAATCATGGGTGGAGTCAGTTCTGTGCGAAATCGGATCCACTAAATTCGAACATTGTTCGTGAATTTTACGTGAACATAGATGATCAAGAAGGATTCCAAGTCATGGTCTGAGGGGTAGCTGTCGATTGGAGCCCAGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCCGCATGCTGGATTTAATGAGATGGTGGTGGCACCATCTAATGACCAATTGAGCGCGACTGTCCGAGAGGTTGGTATTGAAGCGGCCCAATGGAGGTTTTCGAAGATAGAAAAGCACACGTTTCAAGCGGCTTATTTGAAGAGTGAGGCTAACACATGGTTCGGCTTCATCAAATTACGTTTGCTTCCGACAACCCATTACTCGACAGTATCCCGGGACAGATTACTGTTGGTATTTGCTATTTTTCGTTCTTTGAGTATAGATGTGGGAAAAATTATATCGAGTGAAATTTACAATTGCTGGCGTAAGAAGGTGGGGAAGCTTTTCTTCCGAAACATGATTACTATGTTGTGCAGCAGGGCAGGAGTGCCCACGAGTCCAGAGGATGTTCTTCTACTTCACAAGGGGATAAGAGTGAAGGAATGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCGTAATTAATTTTGTTTAATCTAAAATACCAATACATTGGCAATAATATTAGAACTATTCTAAATATATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTTATAAAGTAACAAATTACTTACTCTCGTTGACGACTCAGATTAAATTCACCAACTGCTTGTGAATTAATCACGAACTAGTGTGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTGTGGGAGCCTTTGGGAGAATTCTCTGAGAGTAGGAAAATGAATGGGATACCTTTCACCCCACCCCAGGGGTCCTATATATAG

mRNA sequence

ATGCTGAAGCCCTATTTATTCAAGACCCTTGGAAAGAGAGAGATACTGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACAAAAGCAAAGAGAAGGAAGACGCCCGAAGAGAGAGGCTAAGAGACGAAGAAGACAACAGAGAGCTGAGGTTACGGAAGTAGTGAGGAAGGTTATTCAGGACATTGCTGATGACGCAGTTGAAGAAGAGGAACCAAAGGAACCTGAGGAAAAGACAGATGCTGAACAGAGTGATCCGATAGTGGAAAATCCGCAAGAGGTGCAAGAGAAGCAAGCAGAAGATATGCAAGAACAAGGAAACGGTCAAGAGCAGCAGGTTCAAACTGAAGAAATTGTGCCGGAGGAAGAAGAACAAGAGAAAGAAGGGGCAGAGGACCAAGAGAGAGAAGAAACAAAAAAGAAAGCAGAGGAAGGAGCTTTGACGAAGCATCAAGAAGACAAGGGCAAGGGAGTTGCCGAAGCAACGGATGAAGCAGAAGAGGAAGAATCAGGAATGCCATTCATTCGCTTCGTCAATGAGCTTGCCAAAGCAAAATATAGGGAGATGCTAAAAAGGGATTTCTTATTTGAAAGAGGCTTCGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCCGCATGCTGGATTTAATGAGATGGTGGTGGCACCATCTAATGACCAATTGAGCGCGACTGTCCGAGAGGTTGGTATTGAAGCGGCCCAATGGAGGTTTTCGAAGATAGAAAAGCACACGTTTCAAGCGGCTTATTTGAAGAGTGAGGCTAACACATGGTTCGGCTTCATCAAATTACGTTTGCTTCCGACAACCCATTACTCGACAGTATCCCGGGACAGATTACTGTTGCAGGGCAGGAGTGCCCACGAGTCCAGAGGATGTTCTTCTACTTCACAAGGGGATAAGAGTGAAGGAATGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTGTGGGAGCCTTTGGGAGAATTCTCTGAGAGTAGGAAAATGAATGGGATACCTTTCACCCCACCCCAGGGGTCCTATATATAG

Coding sequence (CDS)

ATGCTGAAGCCCTATTTATTCAAGACCCTTGGAAAGAGAGAGATACTGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACAAAAGCAAAGAGAAGGAAGACGCCCGAAGAGAGAGGCTAAGAGACGAAGAAGACAACAGAGAGCTGAGGTTACGGAAGTAGTGAGGAAGGTTATTCAGGACATTGCTGATGACGCAGTTGAAGAAGAGGAACCAAAGGAACCTGAGGAAAAGACAGATGCTGAACAGAGTGATCCGATAGTGGAAAATCCGCAAGAGGTGCAAGAGAAGCAAGCAGAAGATATGCAAGAACAAGGAAACGGTCAAGAGCAGCAGGTTCAAACTGAAGAAATTGTGCCGGAGGAAGAAGAACAAGAGAAAGAAGGGGCAGAGGACCAAGAGAGAGAAGAAACAAAAAAGAAAGCAGAGGAAGGAGCTTTGACGAAGCATCAAGAAGACAAGGGCAAGGGAGTTGCCGAAGCAACGGATGAAGCAGAAGAGGAAGAATCAGGAATGCCATTCATTCGCTTCGTCAATGAGCTTGCCAAAGCAAAATATAGGGAGATGCTAAAAAGGGATTTCTTATTTGAAAGAGGCTTCGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCCGCATGCTGGATTTAATGAGATGGTGGTGGCACCATCTAATGACCAATTGAGCGCGACTGTCCGAGAGGTTGGTATTGAAGCGGCCCAATGGAGGTTTTCGAAGATAGAAAAGCACACGTTTCAAGCGGCTTATTTGAAGAGTGAGGCTAACACATGGTTCGGCTTCATCAAATTACGTTTGCTTCCGACAACCCATTACTCGACAGTATCCCGGGACAGATTACTGTTGCAGGGCAGGAGTGCCCACGAGTCCAGAGGATGTTCTTCTACTTCACAAGGGGATAAGAGTGAAGGAATGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTGTGGGAGCCTTTGGGAGAATTCTCTGAGAGTAGGAAAATGAATGGGATACCTTTCACCCCACCCCAGGGGTCCTATATATAG

Protein sequence

MLKPYLFKTLGKREILRKKKCPLPLRHQRQKQREGRRPKREAKRRRRQQRAEVTEVVRKVIQDIADDAVEEEEPKEPEEKTDAEQSDPIVENPQEVQEKQAEDMQEQGNGQEQQVQTEEIVPEEEEQEKEGAEDQEREETKKKAEEGALTKHQEDKGKGVAEATDEAEEEESGMPFIRFVNELAKAKYREMLKRDFLFERGFGAINSLFNLQDFPHAGFNEMVVAPSNDQLSATVREVGIEAAQWRFSKIEKHTFQAAYLKSEANTWFGFIKLRLLPTTHYSTVSRDRLLLQGRSAHESRGCSSTSQGDKSEGMEFRNSVKRKRDWDRFCEHHHYGYTGMTLRLLEAGDLWEPLGEFSESRKMNGIPFTPPQGSYI

Homology

The following BLAST results are available for this feature:

BLAST of Spg010877 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010877 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010877 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010877 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010877.1	Spg010877.1	mRNA