Spg010833 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010833
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 9935076 .. 9936305 (+)
RNA-Seq Expression	Spg010833
Synteny	Spg010833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGCACACGAAAAACGAGGGCTACGGGATTCTCACCGGCGATCGTGAACCAAGAGCCCGACGCTCAAACTCTCTCCTTTTCGACAATGCCGACCACGTCGAGGGAGAATCAGAATTTATCTACACCTAGGAGGTCCACGCGCGCCACCGTCATCCATCAAACCCAAAAACCTGCCGTTCAACAGTTCAAGAAACACTCGCGGGAGTGGTTTTCCATGATCCGGGCAATAGGAGCTCAGAGACGTGTTGCTCTTGAAGAAGAAGGAAATAGGCGAGATGGAGAAGAAGCCACCAAGGCAGCTGGAAGCTCTCGGCAAGAGGGAACTTCAATGGGTAAAAATTCGGAACTTTAAACTAACTCCTCTTCGTCTTGCAGGAAAAAACCATTCGTTACCTACAATGCAAGGAGGAGGAGCCCGAAGAAGGTTGTGCCCGAGAAGCCGCTTGTTATTGAGCCTCTCAAGGTAGCAAGAATGCCATCAAACGTGTTCGAGGACATAATTCGCCAAGCTGCGGCAAAGGCTCTCGTGATTGCTGAGGGGTATAAGGCTGAACAAGAAGCCTTGAAAGATATTGAGGCTGAGAGAGAGATGGAAAACCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAAATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGGGGCCGAGAGGGCCTTAGAAGCTGAAAAAGAAAGAAAGTTTGAGGAAAACCTCAGGAGGGCAACCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAATTGCACGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCATAAAGCTCAAAGAGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACCAGGGCCAAGTGATGAGAATTTAGAAAAAGAAAAAGAAAGATAAGTAGAGATTGAAGCCCACAATGCGACTGCATCGGGGCCGCATTCTGAAGAAGGCCTAACCGAGGCCACTGAAGCTTAGCCAACTGATGAGGTTTTCGAACCTCTATTCAAAGATGATCCACCAGCAGTTGATAGCACCTCTTCGGGAGGGAAGAGGGACAAAGAAGAGAAAGAAAGCAAGGAGGCCGAGAAACCTCCAGTGACTCTGAATCAGAATCAGACTCAGAGATCGAGGAACTGGATGATGACCAAGTTCCCATCTTTGCAGCATTGA

mRNA sequence

ATGCACGGCACACGAAAAACGAGGGCTACGGGATTCTCACCGGCGATCGTGAACCAAGAGCCCGACGCTCAAACTCTCTCCTTTTCGACAATGCCGACCACGTCGAGGGAGAATCAGAATTTATCTACACCTAGGAGGTCCACGCGCGCCACCGTCATCCATCAAACCCAAAAACCTGCCGTTCAACAGTTCAAGAAACACTCGCGGGAGTGGTTTTCCATGATCCGGGCAATAGGAGCTCAGAGACGTGTTGCTCTTGAAGAAGAAGGAAATAGGCGAGATGGAGAAGAAGCCACCAAGGCAGCTGGAAGCTCTCGGCAAGAGGGAACTTCAATGGCAAGAATGCCATCAAACGTGTTCGAGGACATAATTCGCCAAGCTGCGGCAAAGGCTCTCGTGATTGCTGAGGGGTATAAGGCTGAACAAGAAGCCTTGAAAGATATTGAGGCTGAGAGAGAGATGGAAAACCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAAATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGGGGCCGAGAGGGCCTTAGAAGCTGAAAAAGAAAGAAAGTTTGAGGAAAACCTCAGGAGGGCAACCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAATTGCACGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCATAAAGCTCAAAGAGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACCAGGGCCAAATGATCCACCAGCAGTTGATAGCACCTCTTCGGGAGGGAAGAGGGACAAAGAAGAGAAAGAAAGCAAGGAGGCCGAGAAACCTCCAGTGACTCTGAATCAGAATCAGACTCAGAGATCGAGGAACTGGATGATGACCAAGTTCCCATCTTTGCAGCATTGA

Coding sequence (CDS)

ATGCACGGCACACGAAAAACGAGGGCTACGGGATTCTCACCGGCGATCGTGAACCAAGAGCCCGACGCTCAAACTCTCTCCTTTTCGACAATGCCGACCACGTCGAGGGAGAATCAGAATTTATCTACACCTAGGAGGTCCACGCGCGCCACCGTCATCCATCAAACCCAAAAACCTGCCGTTCAACAGTTCAAGAAACACTCGCGGGAGTGGTTTTCCATGATCCGGGCAATAGGAGCTCAGAGACGTGTTGCTCTTGAAGAAGAAGGAAATAGGCGAGATGGAGAAGAAGCCACCAAGGCAGCTGGAAGCTCTCGGCAAGAGGGAACTTCAATGGCAAGAATGCCATCAAACGTGTTCGAGGACATAATTCGCCAAGCTGCGGCAAAGGCTCTCGTGATTGCTGAGGGGTATAAGGCTGAACAAGAAGCCTTGAAAGATATTGAGGCTGAGAGAGAGATGGAAAACCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAAATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGGGGCCGAGAGGGCCTTAGAAGCTGAAAAAGAAAGAAAGTTTGAGGAAAACCTCAGGAGGGCAACCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAATTGCACGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCATAAAGCTCAAAGAGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACCAGGGCCAAATGATCCACCAGCAGTTGATAGCACCTCTTCGGGAGGGAAGAGGGACAAAGAAGAGAAAGAAAGCAAGGAGGCCGAGAAACCTCCAGTGACTCTGAATCAGAATCAGACTCAGAGATCGAGGAACTGGATGATGACCAAGTTCCCATCTTTGCAGCATTGA

Protein sequence

MHGTRKTRATGFSPAIVNQEPDAQTLSFSTMPTTSRENQNLSTPRRSTRATVIHQTQKPAVQQFKKHSREWFSMIRAIGAQRRVALEEEGNRRDGEEATKAAGSSRQEGTSMARMPSNVFEDIIRQAAAKALVIAEGYKAEQEALKDIEAEREMENQHMREEDEGARERNLEEEKKREEERQGAERALEAEKERKFEENLRRATIDLQLLEEEKKRREELHEDEKRRKEAEDFLAAFEPLHKAQREAELLQGRVEEEAQPGPNDPPAVDSTSSGGKRDKEEKESKEAEKPPVTLNQNQTQRSRNWMMTKFPSLQH

Homology

The following BLAST results are available for this feature:

BLAST of Spg010833 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010833 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010833 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010833 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..231
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010833.1	Spg010833.1	mRNA