Spg010076 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010076
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold7: 6461030 .. 6463321 (+)
RNA-Seq Expression	Spg010076
Synteny	Spg010076

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGCCTACCCCTCTCCCTCAACTTCTTGCCATGAATTCCAGCCAGCACCGCCGTCGGAGTGCAGCACGCCGTCGTCGCCGGAGTTGCAGCGTCGCCATCGTCGTGTCGTTGCAACCAAGCTCGCCATCGTTGCTCTTGTGGAGTCGCCGACAGCAAGAACCCACGACTCTCTCTCTCTTTCTCTCCCTATCTCCGGCGAGTTCAACCCAACCCATGGCCAGCAGTGTTTCTTCTCCGGCCAACTCTTTCTTTCTCTTGTTTTCGGCCAAGACCCACGTGAATCCGACAAGTTAGCTTCAGCAATGTCGCGATTTCGCCTCTCTCTCACTCATTTGATGCTAACTAGGGTGTGGGTCTCATGTTCTCGCCATTCTCGATCCTCTTCTCTGGTGGCAAGCATGTCAGCGTGAGACCCACGACAGACTGGAAACTCCAGCAGCAAGGAGTAGCGTTTGGTGGGTTTTTCTCCTGTCATTCAACTTCAATCGGAGTAACCCTTGTTCAGCCGATTCCGCCTCTGTCCAGCAGCATTCTTGGTTGTTTTTGGTGTCGTTTGGCCTTAGGTCGCTCCGGGTGGTAAGTTTATGCTTTACCCACTCTTGGTTGAAGCTTAATTTAGAATGCCCAATGGTTTAGGTGCTGAAATTTTAACATTAACGTTGATTTTCTGATCTGCAGTGCCGTCTAAGTGTTCGATTAAGTTCGATACACTTTAACTCAAGTACCCATTGCCCAAGGAGTATTCTATCACGTTGTTCGAGGTTAGTATAACCCGTCTAGCGTGGTATCGAGTTCGTTTGGGTAGTATTCGATGCTGTTTTTAGTTTTATGGCTTAAGTGTTTGATACCCATTAGAGATTAAGCCTTAAAACCATGTTTTAATCGATACCCATTCGTTATCGACCTTATAATTGCAGGTTTTAAGCGTGTTCGGTTGTTGTTCAGCGAGCGTTTGATCTCAAATATCGTGTTCAGCGAATACCCACAACCCAAAAGACCTTGATTTTGGTTACCCATAACCCGGTGACTTGGGATCTTGGTTCTTGGGTCGTTTCGAACACAAGTCAGCTTGTTCTCAAGGTTGTTTGAGCACTAAGCGGTAAATTCCAGCATCCCTAGATCCTTTCCTCAAGTTTATTAGGTGCTCTAAGTTGTTTTCTAACCCATGGTAGTTGTTGCTTGTAGTTGGAGCTCTTTAGGCTCTTCCGGTTGTTTCCATTAGTCCTTTAGGATCATTTAGGAGCGTTAGAGCTTCCGGTAAGTAGTTCCTACTTGATGTTGTCTGTTTGACTGTGTGATGCATGTTGAATGTTACTCGCTTTATAATTGCTCTCATGTTTCTTGTTTCTCTGAATATGTGTAAATATATGTTATCGTTGAAAAACATGACTTTTGTTGCATTATGACTCGTTAAAAAGCATGAATTGTTGCTGCATGTTGGTTTGTTGTAAAGTGTGTTGGTTGGGTTTTGCATTCAAGAGTCAAGCATGAGTTGAGAGATGTGGTCATGTGAATGCTTAGTGGGCATGATCCATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTGGTTGTGAGATATAGGTCAGGGACCTAAAGTGTGGAAGAAAGAAAAGTTGGGTGAGTGTCAGTGCACCTCGGGTACAAATGGTCGAGGGGTGGCACGTCACCATTGGTTTAAGAGGAGCATCAAGGCCTTGGGTACAAATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTGTTGGTGCCTGGGGAAGGGCCAATACTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATGCACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGGTCAAACGCCGAGCTCAGTAGAGAACATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGTCTCGAAGGATCAGTCTTGGAGAGCTATGTGAGGGCTAAACATGAGCGTTGAGTGAGCTCGTGGAGCTTGAGTGGTTAGCAAGTTGCATATAGAGTGATGCATGAGTTATGACTTAGGAGAGTTATTTGTTTTACTAGCTTTTGAGCATGATGTTATGTTTATCGCTTTTAAAAGTATGTTGCATGCGCATGAAGAGCATGTTGTTTGCTTGTTTGCTGTTTGATGGCTCCTCAGGTAGGGGCTGCTTACCAGTACCTTAGTGTATTGACCCCCTCCCCTCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGACTGCGTGGACCATGGTGATGCGGAGGAGGCGTATGAGGAGGAACCATAG

mRNA sequence

GCCGCCTACCCCTCTCCCTCAACTTCTTGCCATGAATTCCAGCCAGCACCGCCGTCGGAGTGCAGCACGCCGTCGTCGCCGGAGTTGCAGCGTCGCCATCGTCGTGTCGTTGCAACCAAGCTCGCCATCGTTGCTCTTGTGGAGTCGCCGACAGCAAGAACCCACGACTCTCTCTCTCTTTCTCTCCCTATCTCCGGCGAGTTCAACCCAACCCATGGCCAGCAGTGTTTCTTCTCCGGCCAACTCTTTCTTTCTCTTGTTTTCGGCCAAGACCCACGGTGTGGGTCTCATGTTCTCGCCATTCTCGATCCTCTTCTCTGGTGGCAAGCATGTCAGCGTGAGACCCACGACAGACTGGAAACTCCAGCAGCAAGGAGTAGCGTTTGGTGGGTTTTTCTCCTGTCATTCAACTTCAATCGGAGTAACCCTTGTTCAGCCGATTCCGCCTCTGTCCAGCAGCATTCTTGGTTGTTTTTGGTGTCGTTTGGCCTTAGGTCGCTCCGGGTGTGCCGTCTAAGTGTTCGATTAAGTTCGATACACTTTAACTCAAGTACCCATTGCCCAAGGAGTATTCTATCACGTTGTTCGAGGGCCAATACTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATGCACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGGTCAAACGCCGAGCTCAGTAGAGAACATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGTCTCGAAGGATCAGTCTTGGAGAGCTATGTGAGGGCTAAACATGAGCTATGTTGCATGCGCATGAAGAGCATGTTGTTTGCTTGTTTGCTGTTTGATGGCTCCTCAGGTTATGAGGACTGCGTGGACCATGGTGATGCGGAGGAGGCGTATGAGGAGGAACCATAG

Coding sequence (CDS)

GCCGCCTACCCCTCTCCCTCAACTTCTTGCCATGAATTCCAGCCAGCACCGCCGTCGGAGTGCAGCACGCCGTCGTCGCCGGAGTTGCAGCGTCGCCATCGTCGTGTCGTTGCAACCAAGCTCGCCATCGTTGCTCTTGTGGAGTCGCCGACAGCAAGAACCCACGACTCTCTCTCTCTTTCTCTCCCTATCTCCGGCGAGTTCAACCCAACCCATGGCCAGCAGTGTTTCTTCTCCGGCCAACTCTTTCTTTCTCTTGTTTTCGGCCAAGACCCACGGTGTGGGTCTCATGTTCTCGCCATTCTCGATCCTCTTCTCTGGTGGCAAGCATGTCAGCGTGAGACCCACGACAGACTGGAAACTCCAGCAGCAAGGAGTAGCGTTTGGTGGGTTTTTCTCCTGTCATTCAACTTCAATCGGAGTAACCCTTGTTCAGCCGATTCCGCCTCTGTCCAGCAGCATTCTTGGTTGTTTTTGGTGTCGTTTGGCCTTAGGTCGCTCCGGGTGTGCCGTCTAAGTGTTCGATTAAGTTCGATACACTTTAACTCAAGTACCCATTGCCCAAGGAGTATTCTATCACGTTGTTCGAGGGCCAATACTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATGCACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGGTCAAACGCCGAGCTCAGTAGAGAACATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGTCTCGAAGGATCAGTCTTGGAGAGCTATGTGAGGGCTAAACATGAGCTATGTTGCATGCGCATGAAGAGCATGTTGTTTGCTTGTTTGCTGTTTGATGGCTCCTCAGGTTATGAGGACTGCGTGGACCATGGTGATGCGGAGGAGGCGTATGAGGAGGAACCATAG

Protein sequence

AAYPSPSTSCHEFQPAPPSECSTPSSPELQRRHRRVVATKLAIVALVESPTARTHDSLSLSLPISGEFNPTHGQQCFFSGQLFLSLVFGQDPRCGSHVLAILDPLLWWQACQRETHDRLETPAARSSVWWVFLLSFNFNRSNPCSADSASVQQHSWLFLVSFGLRSLRVCRLSVRLSSIHFNSSTHCPRSILSRCSRANTLLSHRCALGTNGQGAMHSLRPWVQMVKGQTPSSVENIVALGTNGQGTVRLEGSVLESYVRAKHELCCMRMKSMLFACLLFDGSSGYEDCVDHGDAEEAYEEEP

Homology

The following BLAST results are available for this feature:

BLAST of Spg010076 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010076 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010076 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010076 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010076.1	Spg010076.1	mRNA