Spg009511 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009511
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 25628131 .. 25630045 (-)
RNA-Seq Expression	Spg009511
Synteny	Spg009511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTTGCGTCTCTTGAGAAGATACATCCCATTAAAAGGAAGAAAAAACTGAATTTTTGTAAATATTTTGAAAGCAAGTTGTTTTGGGTAGGATTTGAGATAAAGAATTGAATTGAATTTTGGATGGCGGAGCGAATCCCGATCGCCATTATTGTTGGTGAAGATAAAAGCTTCATCGATCACAACGTTTTTCCCAGACTGACTCACTACATTCCGCGACTGGCTGGGTCGACTCGTCTACTTGTTAAGGCTATTTGGTGCCCCACCGAGGTTGTCCTTCTTCATTTTGCTCTTCCCATGCATCTTCAAGATCAGTTCAATCAAGAATTGTTTTGTTTATCTAATGATTCAAAATTACTTCTGCTACAGGAATCCCCCAGTTTCAGAGGTGCTTTCGGAATTGCTATACAATATTTTCCGGAGGTGGAGTGTATGAGTGGTGCTGCGGCTCGTGATCAAATCATTGCCGATAATTCAATACGTGGAGTTATTCTTCTATCAACTGGACAAGATCAGGTAACTTATTCTCAATTTATTTACATCAATACTTAAGGCATATTGTCAAAATGAAATCTAATGATTGTATGTAAGAAGATTCCTACATACCGGTATACAAGCAAGTATTTTCCATTTATAAGATTTTCGTGGGAACCTCTAACCTCATGGTCGAGGTACATGTCAATTACCGTTGAGCTAAGTTTGTTTTGTCTACTTGCAATTGAATTAGAGATGTTAAAAGATGGTTACTTTTTAAAACGTAATTGTGTTTTCTATGTATACATAAATTTAAGGGAAAAATACACTTTTAGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACAATTTAGTCCCTGAGGTTTGATTTTAGTTGCACTTTAGTCCCTCCATCCATTTTTCCATTAAAAACTAACGGTTTGATGACGTGGCACCTTTTTTTTTATTAAAAATTTATTTTTAAAATTTTTTAAATATAAATATATTAAAATAATAAAATATTATTATTTTTTAAATTTTTATTATTTCTTTCTCTCTTCTCCCTTCTTCTTCTCCCCCTTCTTCTTCTTCCTCTTTTTCCAGTAGCCGCCGCCCACCATCACCTGCGACGGCGACAAACTTTTTTTTTTTTCATTATTTTATTCTTCTTGCTTGTTCCTTTGTTTTTCTTTCAGTTTTTTATTTTTTTTAAAAAAAAATTGAAGAACTGAACCAGATCGGAACCAAATCTAGCTCGTGGCACCTTCTTCTCTTCAGATCGGAACCAGATCTGGTCGTTCCAGATCTTTGTTTAAAAACCAAGCACAAATTGTGGATTTCGTGGGTCTCATGGGTCTCGCGTTCGGAGAGGGAAGGAAGGGAGAGGAGAAATGGAGAGAGAGAGGAAAAGAGAGGACGGGTCTCGCGTTTGGCATCGAAATCGCGTGGAGATCAAAGTTCAACGTTGTGTGTGCTGGGTCTAAATCATTAGTGAGAGAAAATGCAGCCGCCGTCCGGTGGGGGTTCTTGGAGAAGGAAACAGAGGCACCATCGCCGCCGTCAAAGCCCCTTTCGTTGGAGAAGAACTCGAAGATCTGGAACTCACATCGCCCAGATCTGAAACTCGTGCCGTCGAAACCCCATCGTCGAAGCCACCCAATACCCATAGCGTTTTCAGCCCCGATACCCATCGTTTTCACCCCCTTCGTTTTCAACCCAATACCCATCGTTTCAGATCGATCAACGACGACATTCTTGTGCTTTTTTTTAGGAGGAACTCAAAATCGCCACAGAACGTTGTTGTTGCCGTTGCTCAGAATCGACGTTGCCATTATAGTTGCTCGGAATCGCCACTCGCCGGAGAAGATGACCGGAGGAAGGCGTCGCCGGAGGAGGGGGCACACGGCTGGGTTGTCGTGA

mRNA sequence

ATGGCGGAGCGAATCCCGATCGCCATTATTGTTGGTGAAGATAAAAGCTTCATCGATCACAACGTTTTTCCCAGACTGACTCACTACATTCCGCGACTGGCTGGGTCGACTCGTCTACTTGTTAAGGCTATTTGGTGCCCCACCGAGGTTGTCCTTCTTCATTTTGCTCTTCCCATGCATCTTCAAGATCAGTTCAATCAAGAATTGTTTTGTTTATCTAATGATTCAAAATTACTTCTGCTACAGGAATCCCCCAGTTTCAGAGGTGCTTTCGGAATTGCTATACAATATTTTCCGGAGGTGGAGTGTATGAGTGGTGCTGCGGCTCGTGATCAAATCATTGCCGATAATTCAATACGTGGAGTTATTCTTCTATCAACTGGACAAGATCAGCTCGTGGCACCTTCTTCTCTTCAGATCGGAACCAGATCTGGTCGTTCCAGATCTTTGTTTAAAAACCAAGCACAAATTGTGGATTTCGTGGGTCTCATGGGTCTCGCGTTCGGAGAGGGAAGGAAGGGAGAGGAGAAATGGAGAGAGAGAGGAAAAGAGAGGACGGGTCTCGCGTTTGGCATCGAAATCGCGTGGAGATCAAAGTTCAACGTTGTGTGTGCTGGGTCTAAATCATTAGTGAGAGAAAATGCAGCCGCCGTCCGGTGGGGGTTCTTGGAGAAGGAAACAGAGGCACCATCGCCGCCGTCAAAGCCCCTTTCGTTGGAGAAGAACTCGAAGATCTGGAACTCACATCGCCCAGATCTGAAACTCGTGCCGTCGAAACCCCATCGTCGAAGCCACCCAATACCCATAGCGTTTTCAGCCCCGATACCCATCGTTTTCACCCCCTTCGTTTTCAACCCAATACCCATCGTTTCAGATCGATCAACGACGACATTCTTGTGCTTTTTTTTAGGAGGAACTCAAAATCGCCACAGAACGTTGTTGTTGCCGTTGCTCAGAATCGACGTTGCCATTATAGTTGCTCGGAATCGCCACTCGCCGGAGAAGATGACCGGAGGAAGGCGTCGCCGGAGGAGGGGGCACACGGCTGGGTTGTCGTGA

Coding sequence (CDS)

ATGGCGGAGCGAATCCCGATCGCCATTATTGTTGGTGAAGATAAAAGCTTCATCGATCACAACGTTTTTCCCAGACTGACTCACTACATTCCGCGACTGGCTGGGTCGACTCGTCTACTTGTTAAGGCTATTTGGTGCCCCACCGAGGTTGTCCTTCTTCATTTTGCTCTTCCCATGCATCTTCAAGATCAGTTCAATCAAGAATTGTTTTGTTTATCTAATGATTCAAAATTACTTCTGCTACAGGAATCCCCCAGTTTCAGAGGTGCTTTCGGAATTGCTATACAATATTTTCCGGAGGTGGAGTGTATGAGTGGTGCTGCGGCTCGTGATCAAATCATTGCCGATAATTCAATACGTGGAGTTATTCTTCTATCAACTGGACAAGATCAGCTCGTGGCACCTTCTTCTCTTCAGATCGGAACCAGATCTGGTCGTTCCAGATCTTTGTTTAAAAACCAAGCACAAATTGTGGATTTCGTGGGTCTCATGGGTCTCGCGTTCGGAGAGGGAAGGAAGGGAGAGGAGAAATGGAGAGAGAGAGGAAAAGAGAGGACGGGTCTCGCGTTTGGCATCGAAATCGCGTGGAGATCAAAGTTCAACGTTGTGTGTGCTGGGTCTAAATCATTAGTGAGAGAAAATGCAGCCGCCGTCCGGTGGGGGTTCTTGGAGAAGGAAACAGAGGCACCATCGCCGCCGTCAAAGCCCCTTTCGTTGGAGAAGAACTCGAAGATCTGGAACTCACATCGCCCAGATCTGAAACTCGTGCCGTCGAAACCCCATCGTCGAAGCCACCCAATACCCATAGCGTTTTCAGCCCCGATACCCATCGTTTTCACCCCCTTCGTTTTCAACCCAATACCCATCGTTTCAGATCGATCAACGACGACATTCTTGTGCTTTTTTTTAGGAGGAACTCAAAATCGCCACAGAACGTTGTTGTTGCCGTTGCTCAGAATCGACGTTGCCATTATAGTTGCTCGGAATCGCCACTCGCCGGAGAAGATGACCGGAGGAAGGCGTCGCCGGAGGAGGGGGCACACGGCTGGGTTGTCGTGA

Protein sequence

MAERIPIAIIVGEDKSFIDHNVFPRLTHYIPRLAGSTRLLVKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSNDSKLLLLQESPSFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQLVAPSSLQIGTRSGRSRSLFKNQAQIVDFVGLMGLAFGEGRKGEEKWRERGKERTGLAFGIEIAWRSKFNVVCAGSKSLVRENAAAVRWGFLEKETEAPSPPSKPLSLEKNSKIWNSHRPDLKLVPSKPHRRSHPIPIAFSAPIPIVFTPFVFNPIPIVSDRSTTTFLCFFLGGTQNRHRTLLLPLLRIDVAIIVARNRHSPEKMTGGRRRRRRGHTAGLS

Homology

[Close]

BLAST of Spg009511 vs. NCBI nr
Match: XP_022153821.1 (uncharacterized protein YMR315W [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 5.0e-04
Identity = 41/107 (38.32%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 27  THYIPRLAG-STRLLVKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSNDSKLLLLQESP 86
           T YIPRLA  S  L+VKAIW  TE                                    
Sbjct: 18  TQYIPRLAEISDLLVVKAIWSRTEA----------------------------------- 77

Query: 87  SFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
           S +GA  IA +YFP VEC  G A  D+II DNSI GV ++  GQ Q+
Sbjct: 78  SAKGAVEIASKYFPTVECKWGDAGLDEIIQDNSILGVAVVLAGQTQV 89

[Close]

BLAST of Spg009511 vs. NCBI nr
Match: KAG2675017.1 (hypothetical protein I3760_13G164400 [Carya illinoinensis])

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-04
Identity = 42/118 (35.59%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 16  SFIDHNVFPRLTHYIPRLAGSTRLL-VKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSN 75
           + I   +F R T YIPRL+  + L  +KAIW  +EV              F ++      
Sbjct: 9   AIIGAGIFVR-TQYIPRLSEISHLFNLKAIWSRSEV--------------FRKKRDYYGV 68

Query: 76  DSKLLLLQESPSFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
               L +    S RGA  IA ++FPEVEC  G    D+II D+SI GV ++  GQ Q+
Sbjct: 69  FYPFLYVHTQESARGAVEIARKHFPEVECKWGDNGLDEIIHDHSIIGVAVVLAGQTQV 111

[Close]

BLAST of Spg009511 vs. NCBI nr
Match: KAG2675018.1 (hypothetical protein I3760_13G164400 [Carya illinoinensis])

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-04
Identity = 42/118 (35.59%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 16  SFIDHNVFPRLTHYIPRLAGSTRLL-VKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSN 75
           + I   +F R T YIPRL+  + L  +KAIW  +EV              F ++      
Sbjct: 9   AIIGAGIFVR-TQYIPRLSEISHLFNLKAIWSRSEV--------------FRKKRDYYGV 68

Query: 76  DSKLLLLQESPSFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
               L +    S RGA  IA ++FPEVEC  G    D+II D+SI GV ++  GQ Q+
Sbjct: 69  FYPFLYVHTQESARGAVEIARKHFPEVECKWGDNGLDEIIHDHSIIGVAVVLAGQTQV 111

[Close]

BLAST of Spg009511 vs. ExPASy TrEMBL
Match: A0A6J1DLV1 (uncharacterized protein YMR315W OS=Momordica charantia OX=3673 GN=LOC111021245 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-04
Identity = 41/107 (38.32%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 27  THYIPRLAG-STRLLVKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSNDSKLLLLQESP 86
           T YIPRLA  S  L+VKAIW  TE                                    
Sbjct: 18  TQYIPRLAEISDLLVVKAIWSRTEA----------------------------------- 77

Query: 87  SFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
           S +GA  IA +YFP VEC  G A  D+II DNSI GV ++  GQ Q+
Sbjct: 78  SAKGAVEIASKYFPTVECKWGDAGLDEIIQDNSILGVAVVLAGQTQV 89

[Close]

BLAST of Spg009511 vs. ExPASy TrEMBL
Match: A0A5A7TD47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00140 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-04
Identity = 40/107 (37.38%), Postives = 47/107 (43.93%), Query Frame = 0


Query: 27  THYIPRLAG-STRLLVKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSNDSKLLLLQESP 86
           T Y+PRLA  S  L+VKAIW  TE                                    
Sbjct: 18  TQYLPRLAEISDLLIVKAIWSRTEA----------------------------------- 77

Query: 87  SFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
           S +GA  IA +YFP VEC  G A  D II DNSI GV ++  GQ Q+
Sbjct: 78  SAKGAVDIARKYFPTVECKWGDAGLDDIIQDNSILGVAVVLAGQAQV 89

[Close]

BLAST of Spg009511 vs. ExPASy TrEMBL
Match: A0A1S4DXT7 (uncharacterized protein LOC103491546 OS=Cucumis melo OX=3656 GN=LOC103491546 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-04
Identity = 40/107 (37.38%), Postives = 47/107 (43.93%), Query Frame = 0


Query: 27  THYIPRLAG-STRLLVKAIWCPTEVVLLHFALPMHLQDQFNQELFCLSNDSKLLLLQESP 86
           T Y+PRLA  S  L+VKAIW  TE                                    
Sbjct: 18  TQYLPRLAEISDLLIVKAIWSRTEA----------------------------------- 77

Query: 87  SFRGAFGIAIQYFPEVECMSGAAARDQIIADNSIRGVILLSTGQDQL 133
           S +GA  IA +YFP VEC  G A  D II DNSI GV ++  GQ Q+
Sbjct: 78  SAKGAVDIARKYFPTVECKWGDAGLDDIIQDNSILGVAVVLAGQAQV 89

The following BLAST results are available for this feature:

BLAST of Spg009511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153821.1	5.0e-04	38.32	uncharacterized protein YMR315W [Momordica charantia]	[more]
KAG2675017.1	8.5e-04	35.59	hypothetical protein I3760_13G164400 [Carya illinoinensis]	[more]
KAG2675018.1	8.5e-04	35.59	hypothetical protein I3760_13G164400 [Carya illinoinensis]	[more]

BLAST of Spg009511 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg009511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLV1	2.4e-04	38.32	uncharacterized protein YMR315W OS=Momordica charantia OX=3673 GN=LOC111021245 P...	[more]
A0A5A7TD47	7.0e-04	37.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DXT7	7.0e-04	37.38	uncharacterized protein LOC103491546 OS=Cucumis melo OX=3656 GN=LOC103491546 PE=...	[more]

BLAST of Spg009511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009511.1	Spg009511.1	mRNA