Spg009350 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009350
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	photosystem I subunit F
Location	scaffold5: 37180786 .. 37181460 (-)
RNA-Seq Expression	Spg009350
Synteny	Spg009350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCACAATCCCCACAAATCTCTCTAAACCCCTCTTGAAGCCCAAATTGAGCTCCTCATTGGCCTCAAAGCCGAAACCCTCTCCCTCAATCCTCTGCTCCGCCTCCCAAACTCAGAATGAAAAGGCCTCCTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCCCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAATTGGAATCCTCTTTGAAGAATTACGCCCCCGACAGCGCCCCGGCGCTGGCCATCAAGGCGACGATCGAGAAGACGAAGAGGCGGTTCGCCTTCTACGGGAAGCAGGGGCTGCTGTGTGGGGCTGATGGCTTGCCCCATTTGATTGTGAGTGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCTGGGTTCTTGTTCCTTTACATTGCAGGGTGGATTGGGTGGGTTGGAAGGAGCTATTTGATTGCCATTAGAGATGATAAGAAGCCCACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCCACCAGCTTGGTCTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGTCTAA

mRNA sequence

ATGTCTCTCACAATCCCCACAAATCTCTCTAAACCCCTCTTGAAGCCCAAATTGAGCTCCTCATTGGCCTCAAAGCCGAAACCCTCTCCCTCAATCCTCTGCTCCGCCTCCCAAACTCAGAATGAAAAGGCCTCCTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCCCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAATTGGAATCCTCTTTGAAGAATTACGCCCCCGACAGCGCCCCGGCGCTGGCCATCAAGGCGACGATCGAGAAGACGAAGAGGCGGTTCGCCTTCTACGGGAAGCAGGGGCTGCTGTGTGGGGCTGATGGCTTGCCCCATTTGATTGTGAGTGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCTGGGTTCTTGTTCCTTTACATTGCAGGGTGGATTGGGTGGGTTGGAAGGAGCTATTTGATTGCCATTAGAGATGATAAGAAGCCCACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCCACCAGCTTGGTCTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGTCTAA

Coding sequence (CDS)

ATGTCTCTCACAATCCCCACAAATCTCTCTAAACCCCTCTTGAAGCCCAAATTGAGCTCCTCATTGGCCTCAAAGCCGAAACCCTCTCCCTCAATCCTCTGCTCCGCCTCCCAAACTCAGAATGAAAAGGCCTCCTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCCCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAATTGGAATCCTCTTTGAAGAATTACGCCCCCGACAGCGCCCCGGCGCTGGCCATCAAGGCGACGATCGAGAAGACGAAGAGGCGGTTCGCCTTCTACGGGAAGCAGGGGCTGCTGTGTGGGGCTGATGGCTTGCCCCATTTGATTGTGAGTGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCTGGGTTCTTGTTCCTTTACATTGCAGGGTGGATTGGGTGGGTTGGAAGGAGCTATTTGATTGCCATTAGAGATGATAAGAAGCCCACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCCACCAGCTTGGTCTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGTCTAA

Protein sequence

MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV

Homology

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BLAST of Spg009350 vs. NCBI nr
Match: XP_004150631.1 (photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN66911.1 hypothetical protein Csa_006875 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.5e-112
Identity = 215/224 (95.98%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SS LA KPKPS SILCSASQ QN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

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BLAST of Spg009350 vs. NCBI nr
Match: XP_038895167.1 (photosystem I reaction center subunit III, chloroplastic [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 213/224 (95.09%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKLSS L SKPKPS SILCSA+Q QN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA+KATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 
Sbjct: 121 RRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRG 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

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BLAST of Spg009350 vs. NCBI nr
Match: XP_022994929.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 211/224 (94.20%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SSSLASK +PS SILCSA+Q QNE ASSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++EKTK
Sbjct: 61  LLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           DKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 224

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BLAST of Spg009350 vs. NCBI nr
Match: XP_023542340.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 211/227 (92.95%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQN---EKASSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPK SSSLASK +PS SILCSA+Q QN   E ASSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           IRDDKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 227

[Close]

BLAST of Spg009350 vs. NCBI nr
Match: XP_022955103.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita moschata])

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 210/227 (92.51%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQN---EKASSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPK SSSLASK +PS SILCSA+Q QN   E ASSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           IRDDKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNG+LIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGDLIAKDV 227

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BLAST of Spg009350 vs. ExPASy Swiss-Prot
Match: Q9SHE8 (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAF PE=1 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-85
Identity = 167/225 (74.22%), Postives = 189/225 (84.00%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLA-SKPKPSPSILCSASQTQNEKASSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ + SL  S PK S   +CS  ++ +     S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKS-SSSTPQSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA+ A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YGK GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 DDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
            +KKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]

BLAST of Spg009350 vs. ExPASy Swiss-Prot
Match: P46486 (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia OX=4227 GN=PSAF PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-85
Identity = 176/228 (77.19%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSS-LASKPK-PSPSILCSAS---QTQNEKASSSLQAFSAAL 60
           MS TI T+  +PL    L SS + SK K  S SI+CS S   +  N    SSL+A SAAL
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 61  ALSSILLSA---PLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAI 120
           ALSSIL+S+    LPA ADISGLTPCKESKQFAKREKQ +KKLESSLK YAPDSAPALAI
Sbjct: 61  ALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAI 120

Query: 121 KATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 180
           KAT+EKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           SYLIAIRD+KKPTQKEIIIDVPLAT L+FRGFSWPVAAYRE +NGELI
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228

[Close]

BLAST of Spg009350 vs. ExPASy Swiss-Prot
Match: P12355 (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAF PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.3e-81
Identity = 167/229 (72.93%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MSLTIPTNLSKPL-LKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAF----SAAL 60
           MS TIPTNL KPL  KPK  SS  S   P   I+C     Q +     L       +AAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSS--SSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAAL 60

Query: 61  ALSSILLS----APLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA 120
           ALSS+LLS    AP  A+ADI+GLTPCKESKQFAKREKQ +KKL++SLK YA DSAPALA
Sbjct: 61  ALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALA 120

Query: 121 IKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 180
           IKAT+EKTK+RF  YGK GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVG
Sbjct: 121 IKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVG 180

Query: 181 RSYLIAIRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           RSYLIAIRD+KKPTQKEIIIDVPLA+SL+FRGFSWPVAAYREL+NGEL+
Sbjct: 181 RSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227

[Close]

BLAST of Spg009350 vs. ExPASy Swiss-Prot
Match: P13192 (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAF PE=1 SV=2)

HSP 1 Score: 286.2 bits (731), Expect = 3.2e-76
Identity = 150/219 (68.49%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 15  KPKLSSSLASKPKPSPSILCSASQTQNEKA------SSSLQAFSAALALSSILLS----A 74
           KP+L     S+P    S+ CSAS   N  +      S+S++ FSAALALSS+LLS    +
Sbjct: 17  KPRL-----SRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATS 76

Query: 75  PLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFA 134
           P PA ADI+GLTPCKESK FAKREKQ +KKL SSLK YAPDSAPALAI+ATI+KTKRRF 
Sbjct: 77  PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFE 136

Query: 135 FYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKP 194
            YGK GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIA+  +KKP
Sbjct: 137 NYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKP 196

Query: 195 TQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
             +EIIIDV LA  ++ RGF WPVAAYREL+NG+L+  D
Sbjct: 197 AMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230

[Close]

BLAST of Spg009350 vs. ExPASy Swiss-Prot
Match: P12356 (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAF PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.7e-51
Identity = 111/211 (52.61%), Postives = 145/211 (68.72%), Query Frame = 0


Query: 17  KLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSILLSAPLPAVADISGLT 76
           K SS +A   + +  + C A   +NE AS    A +A+   +++ LSAP  A+ADI+GLT
Sbjct: 11  KASSRVAPSSRRALRVACQAQ--KNETASKVGTALAASALAAAVSLSAPSAAMADIAGLT 70

Query: 77  PCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGAD 136
           PC ESK +AK EK+++K LE  LK Y  DSAPA+A+KAT+E+TK RFA Y K GLLCG D
Sbjct: 71  PCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGND 130

Query: 137 GLPHLI----VSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID 196
           GLPHLI    ++    H GE   P F FLY+AG+IG+VGR YLIA++ + KPT KEIIID
Sbjct: 131 GLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIID 190

Query: 197 VPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           VPLAT L ++G  WP+AA +EL  G L+ K+
Sbjct: 191 VPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219

[Close]

BLAST of Spg009350 vs. ExPASy TrEMBL
Match: A0A0A0M3X2 (PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112
Identity = 215/224 (95.98%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SS LA KPKPS SILCSASQ QN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]

BLAST of Spg009350 vs. ExPASy TrEMBL
Match: A0A6J1K487 (PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 211/224 (94.20%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQNEKASSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SSSLASK +PS SILCSA+Q QNE ASSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++EKTK
Sbjct: 61  LLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           DKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 224

[Close]

BLAST of Spg009350 vs. ExPASy TrEMBL
Match: A0A6J1GT12 (PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 210/227 (92.51%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSASQTQN---EKASSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPK SSSLASK +PS SILCSA+Q QN   E ASSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           IRDDKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNG+LIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGDLIAKDV 227

[Close]

BLAST of Spg009350 vs. ExPASy TrEMBL
Match: A0A5D3E1S6 (PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109
Identity = 212/226 (93.81%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSA--SQTQNEKASSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPKLSS LA KPKPS SILCSA  +Q Q++  SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           R++KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Spg009350 vs. ExPASy TrEMBL
Match: A0A1S3C8V6 (PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109
Identity = 212/226 (93.81%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLASKPKPSPSILCSA--SQTQNEKASSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPKLSS LA KPKPS SILCSA  +Q Q++  SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           R++KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Spg009350 vs. TAIR 10
Match: AT1G31330.1 (photosystem I subunit F )

HSP 1 Score: 317.4 bits (812), Expect = 9.3e-87
Identity = 167/225 (74.22%), Postives = 189/225 (84.00%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSSLA-SKPKPSPSILCSASQTQNEKASSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ + SL  S PK S   +CS  ++ +     S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKS-SSSTPQSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA+ A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YGK GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 DDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
            +KKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

The following BLAST results are available for this feature:

BLAST of Spg009350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150631.1	3.5e-112	95.98	photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN6...	[more]
XP_038895167.1	3.9e-111	95.09	photosystem I reaction center subunit III, chloroplastic [Benincasa hispida]	[more]
XP_022994929.1	3.9e-111	94.20	photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima]	[more]
XP_023542340.1	1.2e-109	92.95	photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. ...	[more]
XP_022955103.1	2.8e-109	92.51	photosystem I reaction center subunit III, chloroplastic [Cucurbita moschata]	[more]

BLAST of Spg009350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE8	1.3e-85	74.22	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana...	[more]
P46486	1.7e-85	77.19	Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia O...	[more]
P12355	3.3e-81	72.93	Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX...	[more]
P13192	3.2e-76	68.49	Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4...	[more]
P12356	4.7e-51	52.61	Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinha...	[more]

BLAST of Spg009350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3X2	1.7e-112	95.98	PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1	[more]
A0A6J1K487	1.9e-111	94.20	PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1	[more]
A0A6J1GT12	1.3e-109	92.51	PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1	[more]
A0A5D3E1S6	1.8e-109	93.81	PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=...	[more]
A0A1S3C8V6	1.8e-109	93.81	PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1	[more]

BLAST of Spg009350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31330.1	9.3e-87	74.22	photosystem I subunit F	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 58..223 e-value: 3.1E-81 score: 271.3
IPR003666	Photosystem I PsaF, reaction centre subunit III	PANTHER	PTHR34939	PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC	coord: 1..224
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	GENE3D	1.10.8.110	Photosystem I PsaF, reaction centre subunit III	coord: 71..224 e-value: 3.5E-74 score: 249.6
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	SUPERFAMILY	81536	Subunit III of photosystem I reaction centre, PsaF	coord: 71..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009350.1	Spg009350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I