Spg009158 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009158
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF761 domain-containing protein
Locationscaffold2: 2164513 .. 2164887 (-)
RNA-Seq ExpressionSpg009158
SyntenySpg009158
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGATTAGCTTGCTGGGTCGGCTGAGGAAGGCGGTGAAGAAGCTGAAATTCATGATGAACTTCAACATCCAAGCCTGGCGTTTGGCGGCGATGTTGGGGCGGACTTCGTCGAGAAGTCTCCGCCTCAGCTTCAACGAACGCCCAGGATTGAAGGCCTGTACGGAGGACATTACAGAACTTTCAGAAGAGTCCATTTCGTCGAGAGGGCTACAGAGAACGGCGAGCTACGCTTCTGAAGACGACGTGGACAAGCGAGCGGAGGCTTTCATATCTAATTTCTATCGGCAGCTTAGGATCGAGCGGCAGGTCTCGCTTGAGCTTCAATACTGCCGTGGGAATAGCTTTAAGCAGCTTATAATTTCTCCTTGA

mRNA sequence

ATGGCGGCGATTAGCTTGCTGGGTCGGCTGAGGAAGGCGGTGAAGAAGCTGAAATTCATGATGAACTTCAACATCCAAGCCTGGCGTTTGGCGGCGATGTTGGGGCGGACTTCGTCGAGAAGTCTCCGCCTCAGCTTCAACGAACGCCCAGGATTGAAGGCCTGTACGGAGGACATTACAGAACTTTCAGAAGAGTCCATTTCGTCGAGAGGGCTACAGAGAACGGCGAGCTACGCTTCTGAAGACGACGTGGACAAGCGAGCGGAGGCTTTCATATCTAATTTCTATCGGCAGCTTAGGATCGAGCGGCAGGTCTCGCTTGAGCTTCAATACTGCCGTGGGAATAGCTTTAAGCAGCTTATAATTTCTCCTTGA

Coding sequence (CDS)

ATGGCGGCGATTAGCTTGCTGGGTCGGCTGAGGAAGGCGGTGAAGAAGCTGAAATTCATGATGAACTTCAACATCCAAGCCTGGCGTTTGGCGGCGATGTTGGGGCGGACTTCGTCGAGAAGTCTCCGCCTCAGCTTCAACGAACGCCCAGGATTGAAGGCCTGTACGGAGGACATTACAGAACTTTCAGAAGAGTCCATTTCGTCGAGAGGGCTACAGAGAACGGCGAGCTACGCTTCTGAAGACGACGTGGACAAGCGAGCGGAGGCTTTCATATCTAATTTCTATCGGCAGCTTAGGATCGAGCGGCAGGTCTCGCTTGAGCTTCAATACTGCCGTGGGAATAGCTTTAAGCAGCTTATAATTTCTCCTTGA

Protein sequence

MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDITELSEESISSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFKQLIISP
Homology
BLAST of Spg009158 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-48
Identity = 108/125 (86.40%), Postives = 114/125 (91.20%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLRKAV+KLKFMM FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRKAVEKLKFMMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEES-ISSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFKQ 120
           E SE S  SSRGLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLEL+YCRGNSFKQ
Sbjct: 61  ESSEHSNSSSRGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGNSFKQ 120

Query: 121 LIISP 125
           LI+SP
Sbjct: 121 LIVSP 125

BLAST of Spg009158 vs. NCBI nr
Match: XP_038879799.1 (uncharacterized protein LOC120071543 [Benincasa hispida])

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-48
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA S+L RLRKAVKKLKFMMNF+IQ+WRLAAMLGRTSSR+LRLSFNERPGL ACTEDI 
Sbjct: 1   MAASSVLNRLRKAVKKLKFMMNFSIQSWRLAAMLGRTSSRNLRLSFNERPGLMACTEDII 60

Query: 61  ELSEESI-SSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFKQ 120
           E  EES+ SSRGLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLELQYCRGNSF +
Sbjct: 61  E--EESVSSSRGLQRTTSYASEDDVDKRAEAFIANFYRQLRIERQVSLELQYCRGNSFNK 120

Query: 121 LIISP 125
           LIISP
Sbjct: 121 LIISP 123

BLAST of Spg009158 vs. NCBI nr
Match: XP_022987374.1 (uncharacterized protein LOC111484948 [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 106/126 (84.13%), Postives = 111/126 (88.10%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLR AV+KLKFMM FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRNAVEKLKFMMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEESISSR--GLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFK 120
           E SE S SS   GLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLELQYCRGNS K
Sbjct: 61  ESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELQYCRGNSSK 120

Query: 121 QLIISP 125
           QLI+SP
Sbjct: 121 QLIVSP 126

BLAST of Spg009158 vs. NCBI nr
Match: XP_022921804.1 (uncharacterized protein LOC111429947 [Cucurbita moschata])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 105/126 (83.33%), Postives = 113/126 (89.68%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLRKAV+KLKF+M FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEESISS--RGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFK 120
           E SE S SS  RGLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLEL+YCRG+S K
Sbjct: 61  ESSEHSNSSSRRGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGSSSK 120

Query: 121 QLIISP 125
           QLI+SP
Sbjct: 121 QLIVSP 126

BLAST of Spg009158 vs. NCBI nr
Match: KAG7023392.1 (hypothetical protein SDJN02_14417, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 104/126 (82.54%), Postives = 112/126 (88.89%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLRKAV+KLKF+M FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEESISSR--GLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFK 120
           E SE S SS   GLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLEL+YCRG+S K
Sbjct: 61  ESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGSSSK 120

Query: 121 QLIISP 125
           QLI+SP
Sbjct: 121 QLIVSP 126

BLAST of Spg009158 vs. ExPASy TrEMBL
Match: A0A6J1JIQ4 (uncharacterized protein LOC111484948 OS=Cucurbita maxima OX=3661 GN=LOC111484948 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.9e-47
Identity = 106/126 (84.13%), Postives = 111/126 (88.10%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLR AV+KLKFMM FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRNAVEKLKFMMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEESISSR--GLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFK 120
           E SE S SS   GLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLELQYCRGNS K
Sbjct: 61  ESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELQYCRGNSSK 120

Query: 121 QLIISP 125
           QLI+SP
Sbjct: 121 QLIVSP 126

BLAST of Spg009158 vs. ExPASy TrEMBL
Match: A0A6J1E1K7 (uncharacterized protein LOC111429947 OS=Cucurbita moschata OX=3662 GN=LOC111429947 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 105/126 (83.33%), Postives = 113/126 (89.68%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MAA SLLGRLRKAV+KLKF+M FNIQ+WRLAAMLGRTSSR+LRLSFNE PGLK C EDI 
Sbjct: 1   MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  ELSEESISS--RGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFK 120
           E SE S SS  RGLQRT SYASEDDVDKRAEAFI+NFYRQLRIERQVSLEL+YCRG+S K
Sbjct: 61  ESSEHSNSSSRRGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGSSSK 120

Query: 121 QLIISP 125
           QLI+SP
Sbjct: 121 QLIVSP 126

BLAST of Spg009158 vs. ExPASy TrEMBL
Match: A0A6J1KPV5 (uncharacterized protein LOC111497185 OS=Cucurbita maxima OX=3661 GN=LOC111497185 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.9e-45
Identity = 101/121 (83.47%), Postives = 108/121 (89.26%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKAC-TEDI 60
           MAAISLLGRLRKAVKKLK MMNFN+Q+WRLAAM GR+ SRSLR+SF E PGLK C  ED+
Sbjct: 1   MAAISLLGRLRKAVKKLKLMMNFNVQSWRLAAMFGRSLSRSLRVSFKEAPGLKGCREEDV 60

Query: 61  TELSEESISSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSFKQ 120
           TEL  ESIS RGLQRT SYASEDDVD RAEAFI+NFYRQLRIERQVSL+LQYCRGNSFKQ
Sbjct: 61  TELCGESISWRGLQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFKQ 120

BLAST of Spg009158 vs. ExPASy TrEMBL
Match: A0A0A0LUK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.4e-45
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           M AISLLGRLRKAVKK++FMMNF+IQ WRLAAMLGRTSSR+LRLSF ERPGLKAC+EDI 
Sbjct: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60

Query: 61  ELSEESI--SSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSF 118
              E+S+  SSRGLQRT SYASEDDVD RAEAFI+NFYRQLRIERQVSLELQYCRGNSF
Sbjct: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSF 119

BLAST of Spg009158 vs. ExPASy TrEMBL
Match: A0A6J1C4F5 (uncharacterized protein LOC111007290 OS=Momordica charantia OX=3673 GN=LOC111007290 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44
Identity = 100/125 (80.00%), Postives = 113/125 (90.40%), Query Frame = 0

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNIQAWRLAAMLGRTSSRSLRLSFNERPGLKACTEDIT 60
           MA  SLLGRLRKAV+K++FM+NF+IQ+WRLAAM+GRTSSR+LRLSFNERPGLKACTEDIT
Sbjct: 1   MAGSSLLGRLRKAVRKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDIT 60

Query: 61  ELSEESISSRGLQRTASYASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNSF-KQ 120
           E S+    S GLQRTASYASEDDVDKRA+ FI+NFYRQL+IERQVSLELQYCRGNSF   
Sbjct: 61  ESSQH--YSPGLQRTASYASEDDVDKRADMFIANFYRQLQIERQVSLELQYCRGNSFNNH 120

Query: 121 LIISP 125
           L+ISP
Sbjct: 121 LLISP 123

BLAST of Spg009158 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-25
Identity = 69/118 (58.47%), Postives = 89/118 (75.42%), Query Frame = 0

Query: 5   SLLGRLRKAVKKLKFMMNFNIQA-WRLAAMLG-RTSSRSLRLSFNERPGLKACTEDITEL 64
           SLL RLR+AV K+KF+++F I + W L  MLG  +SS SLRLSFN+RPGL A     TE 
Sbjct: 8   SLLNRLRQAVNKVKFVLSFKINSLWGLVPMLGSSSSSSSLRLSFNDRPGLTAA---FTEN 67

Query: 65  SEESI-SSRG-LQRTASY--ASEDDVDKRAEAFISNFYRQLRIERQVSLELQYCRGNS 117
             +S  SSRG L RT SY  +S++D+D +AE FI+NFYRQL+IERQ+SLEL+YC+GN+
Sbjct: 68  EPDSTGSSRGALYRTVSYDQSSDEDIDNKAEMFIANFYRQLKIERQISLELKYCQGNN 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023515447.11.5e-4886.40uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo][more]
XP_038879799.12.6e-4887.20uncharacterized protein LOC120071543 [Benincasa hispida][more]
XP_022987374.11.4e-4684.13uncharacterized protein LOC111484948 [Cucurbita maxima][more]
XP_022921804.12.4e-4683.33uncharacterized protein LOC111429947 [Cucurbita moschata][more]
KAG7023392.11.2e-4582.54hypothetical protein SDJN02_14417, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JIQ46.9e-4784.13uncharacterized protein LOC111484948 OS=Cucurbita maxima OX=3661 GN=LOC111484948... [more]
A0A6J1E1K71.2e-4683.33uncharacterized protein LOC111429947 OS=Cucurbita moschata OX=3662 GN=LOC1114299... [more]
A0A6J1KPV54.9e-4583.47uncharacterized protein LOC111497185 OS=Cucurbita maxima OX=3661 GN=LOC111497185... [more]
A0A0A0LUK46.4e-4584.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1[more]
A0A6J1C4F51.9e-4480.00uncharacterized protein LOC111007290 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
Match NameE-valueIdentityDescription
AT5G57510.13.3e-2558.47unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 81..112
e-value: 5.3E-12
score: 45.1
NoneNo IPR availablePANTHERPTHR33098:SF64OS08G0448100 PROTEINcoord: 1..120
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009158.1Spg009158.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071456 cellular response to hypoxia