Spg009029 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009029
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 17717440 .. 17718100 (-)
RNA-Seq ExpressionSpg009029
SyntenySpg009029
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAGGTACCCCGTCGTCACCATCGGAAGCAGAAAGTTGGTCATGTCAAGGTGGTTCGGACTGATACTCCTTCGCCACCGACAACCGATTCTGAGAAAGAAAATACGGAAAAAGAAGAGCGAGAGAAAAAAGAGGCAGAAGATAAAGCGAGAGAAGAAACAGAAAAGAAAATGGAGGAGGAAATTTTGCCCGAACAGAGGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGCTGAAGCTGAAGATATCGAAACCAAGGAGCCAAGGTTGCCGTATAATCGCTTCATTAACAATCTTGCCCGAGCAAAGTATATAGAGATGCTAAAAAAGAGCCTTTTTATTTGAGCGAGGATTTGATGATGATCTGCCGCGCTTCTTGAGAACTGGAATAGCGAATCATGGATGGAGTCAGTTCTGCGCAAAGTCGGAGCCGGTCAATTCCAATATTGTCCGTGAATTTTATGCAAATATTGATGATCAAGAAGGATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTGGAGCCCAGGAGCCATCAATTCTCTCTTCAACCTCCAAGACTTTCTGCACGCGGGATTCAATGAGATGGTGGTAGCGCCATCGAATGATCAGTTAAATGCGGCTGTGAGGGAGGTTGGCATCGAAGGGGCTTAG

mRNA sequence

ATGACGGAGGTACCCCGTCGTCACCATCGGAAGCAGAAAGTTGGTCATGTCAAGGTGGTTCGGACTGATACTCCTTCGCCACCGACAACCGATTCTGAGAAAGAAAATACGGAAAAAGAAGAGCGAGAGAAAAAAGAGGCAGAAGATAAAGCGAGAGAAGAAACAGAAAAGAAAATGGAGGAGGAAATTTTGCCCGAACAGAGGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGCTGAAGCTGAAGATATCGAAACCAAGGAGCCAAGGTTGCCGTATAATCGCTTCATTAACAATCTTGCCCGAGCAAAAACTGGAATAGCGAATCATGGATGGAGTCAGTTCTGCGCAAAGTCGGAGCCGGTCAATTCCAATATTGTCCGTGAATTTTATGCAAATATTGATGATCAAGAAGGATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTGGAGCCCAGGAGCCATCAATTCTCTCTTCAACCTCCAAGACTTTCTGCACGCGGGATTCAATGAGATGGTGGTAGCGCCATCGAATGATCAGTTAAATGCGGCTGTGAGGGAGGTTGGCATCGAAGGGGCTTAG

Coding sequence (CDS)

ATGACGGAGGTACCCCGTCGTCACCATCGGAAGCAGAAAGTTGGTCATGTCAAGGTGGTTCGGACTGATACTCCTTCGCCACCGACAACCGATTCTGAGAAAGAAAATACGGAAAAAGAAGAGCGAGAGAAAAAAGAGGCAGAAGATAAAGCGAGAGAAGAAACAGAAAAGAAAATGGAGGAGGAAATTTTGCCCGAACAGAGGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGCTGAAGCTGAAGATATCGAAACCAAGGAGCCAAGGTTGCCGTATAATCGCTTCATTAACAATCTTGCCCGAGCAAAAACTGGAATAGCGAATCATGGATGGAGTCAGTTCTGCGCAAAGTCGGAGCCGGTCAATTCCAATATTGTCCGTGAATTTTATGCAAATATTGATGATCAAGAAGGATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTGGAGCCCAGGAGCCATCAATTCTCTCTTCAACCTCCAAGACTTTCTGCACGCGGGATTCAATGAGATGGTGGTAGCGCCATCGAATGATCAGTTAAATGCGGCTGTGAGGGAGGTTGGCATCGAAGGGGCTTAG

Protein sequence

MTEVPRRHHRKQKVGHVKVVRTDTPSPPTTDSEKENTEKEEREKKEAEDKAREETEKKMEEEILPEQREDKGKGIAEASAEAEDIETKEPRLPYNRFINNLARAKTGIANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDQLNAAVREVGIEGA
Homology
BLAST of Spg009029 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-06
Identity = 30/58 (51.72%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQD 166
           I  H W QFCA  E     +VREFYAN+ D E     VRGV V WS  AIN++F L D
Sbjct: 67  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

BLAST of Spg009029 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale])

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-06
Identity = 33/70 (47.14%), Postives = 39/70 (55.71%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  H W  FCA  E     +VREFYAN+ D E     V+GV V WS  AIN+LF L D +
Sbjct: 58  IIQHNWQLFCAHHEDPIVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGDPV 117

Query: 168 --HAGFNEMV 176
             H+ F E V
Sbjct: 118 DEHSAFVEDV 127

BLAST of Spg009029 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-05
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  H W  FCA  E + + +VREFYAN+ + +     VRGV V  S  AIN+++ L D +
Sbjct: 58  ITQHNWQLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGDPV 117

Query: 168 --HAGFNEMVVAPSNDQLNAAVREVGIEGA 196
             H+ F E +  P   +L   +  V I GA
Sbjct: 118 DEHSEFVEAITEP---ELATVLETVAIAGA 144

BLAST of Spg009029 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-05
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  HGW QFC         +VREFYAN+ D       V+ V V ++  AINS+F L++ +
Sbjct: 11  IHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVV 70

Query: 168 HAGFNEMVVAPSNDQLNAAVREVGIEGA 196
              + +     +++QL   + EV IEGA
Sbjct: 71  DE-YVDFASEVTDEQLEVVLAEVAIEGA 97

BLAST of Spg009029 vs. NCBI nr
Match: RYQ95286.1 (hypothetical protein Ahy_B08g090370 [Arachis hypogaea])

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-05
Identity = 30/92 (32.61%), Postives = 47/92 (51.09%), Query Frame = 0

Query: 90  PRLPYNRFINNLARAKTGIANHGWSQFCAKSEPVNSNIVREFYANI----DDQEGFQAIV 149
           P LP+       +  +  I   GW   C + + V+  ++ EFY N+    DD+E + + V
Sbjct: 8   PELPFKLRKEKYSEIQKIIRKRGWELLCNQLQEVSILLIHEFYTNVIREFDDEEPYMSYV 67

Query: 150 RGVPVDWSPGAINSLFNLQD--FLHAGFNEMV 176
           RGV VD+SP AIN +  ++   F  A + E V
Sbjct: 68  RGVTVDFSPNAINRVLKVKPKRFKQASYEERV 99

BLAST of Spg009029 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.4e-07
Identity = 30/58 (51.72%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQD 166
           I  H W QFCA  E     +VREFYAN+ D E     VRGV V WS  AIN++F L D
Sbjct: 67  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

BLAST of Spg009029 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.1e-06
Identity = 33/70 (47.14%), Postives = 39/70 (55.71%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  H W  FCA  E     +VREFYAN+ D E     V+GV V WS  AIN+LF L D +
Sbjct: 58  IIQHNWQLFCAHHEDPIVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGDPV 117

Query: 168 --HAGFNEMV 176
             H+ F E V
Sbjct: 118 DEHSAFVEDV 127

BLAST of Spg009029 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  H W  FCA  E + + +VREFYAN+ + +     VRGV V  S  AIN+++ L D +
Sbjct: 58  ITQHNWQLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGDPV 117

Query: 168 --HAGFNEMVVAPSNDQLNAAVREVGIEGA 196
             H+ F E +  P   +L   +  V I GA
Sbjct: 118 DEHSEFVEAITEP---ELATVLETVAIAGA 144

BLAST of Spg009029 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-05
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 108 IANHGWSQFCAKSEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFNLQDFL 167
           I  HGW QFC         +VREFYAN+ D       V+ V V ++  AINS+F L++ +
Sbjct: 11  IHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVV 70

Query: 168 HAGFNEMVVAPSNDQLNAAVREVGIEGA 196
              + +     +++QL   + EV IEGA
Sbjct: 71  DE-YVDFASEVTDEQLEVVLAEVAIEGA 97

BLAST of Spg009029 vs. ExPASy TrEMBL
Match: A0A444Y075 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g090370 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 30/92 (32.61%), Postives = 47/92 (51.09%), Query Frame = 0

Query: 90  PRLPYNRFINNLARAKTGIANHGWSQFCAKSEPVNSNIVREFYANI----DDQEGFQAIV 149
           P LP+       +  +  I   GW   C + + V+  ++ EFY N+    DD+E + + V
Sbjct: 8   PELPFKLRKEKYSEIQKIIRKRGWELLCNQLQEVSILLIHEFYTNVIREFDDEEPYMSYV 67

Query: 150 RGVPVDWSPGAINSLFNLQD--FLHAGFNEMV 176
           RGV VD+SP AIN +  ++   F  A + E V
Sbjct: 68  RGVTVDFSPNAINRVLKVKPKRFKQASYEERV 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.11.7e-0651.72hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON90635.18.6e-0647.14hypothetical protein TorRG33x02_134920 [Trema orientale][more]
PON42276.12.5e-0537.78hypothetical protein PanWU01x14_283280 [Parasponia andersonii][more]
EXB53755.14.3e-0536.36hypothetical protein L484_022412 [Morus notabilis][more]
RYQ95286.17.3e-0532.61hypothetical protein Ahy_B08g090370 [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG48.4e-0751.72Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5EYL54.1e-0647.14Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV... [more]
A0A2P5B0K01.2e-0537.78Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE... [more]
W9QTD92.1e-0536.36Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1[more]
A0A444Y0753.5e-0532.61Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g090370 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009029.1Spg009029.1mRNA