Spg008957 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008957
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 11063089 .. 11064846 (+)
RNA-Seq Expression	Spg008957
Synteny	Spg008957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACTTGCCCAAACAATCATCATCTCGCAAGATCACTCGATCCCAGAGTGCTCAAATCGTCCAAGAAGCTGAAGAAAGTGCTCGACATCAAGAAGAGCAACCTGACGCCCCCATGCACGGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCAGTGATCGTGAACCTGGAAACCGTCGTTCAAACTCCTTCTCCCTCGACTATGTCGGCCACCTCGAGGGAGAACCTGAGTTCATCTCAACTTAAGAGGTCCACGCGCGCCAATGTCGTCCATAAAACCCAAAAACCCGCAACCCAACAATTCAGAAAACGCTCACGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAGAGACGTGCAACTCTTGAAGAAGAAGCAAATAGATGGGATGAAGAAGAAGCCGCCAAAGCAATAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTTGTTACTTACAGTGCAAGGAGGAGGAGTCCCGAGAAAGTTGTGCCCGAAAAGCCTCTTGTCATCGAGCCCCTCAAAGTAGCAAGAATGCCCTCGGACGTGTTCGAGGACATAATCCGCCAAGCTGTGGCAAAGGCCCTTGTGATTGCCAAAGGGTATAAGGTTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGATGGAAAATCAGCACATGAGGGAAGAAGAGGAATTTGCGAGGAAAAGAGACCTTGAAGAAGAAAAGAAGTAAGAAGAGGAAAGGCAAGAGGCCGAGAGGGCCAAGTTAGCAGAAGAAGAAGAAAGAAAGTTAGGTGAAAACCTCAGGAGGGCAGCTGTTGAATTGCAGCTTCTTGAGGAAGAAAAACAAAGAAGAGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCCGAATTGCTGCAAGGAAGAGAAGAAGAGGCCCAACAGGGGCCAAGTGAAAAGAACCAAGAAAAAGAAAAAGAAACAGTAGAAATAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAAGCCAGGATGAGGCCACTGAAGCTCAACCAGCTGATGAGGTTTTCGAAACCCTATTCAAAGATGACCCGCCAGCAGCTGATAGCACCTCTTTGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCAAGACCTCCAGTGACTCTAAAACAAAATCTGACTCAGATATCAAGGAATTGGATGACGACCAAGTTTCTGTCTCTGCAGCATTGAGGAAAAAGAGAAGAAGAGAAATCAGGGCTGAAAGGAGGACTAAGAACAAGAATGACCCGATATTTGCTAAGAGGCAGAGGACTAGGTCCAAGGACGCCTCTCCAACAATTCCTCCAACCGTCTCACCCGCTAAGCCGAAAGCCAGATCTCCTGAGGTTGCATCTCCTAAAAATCCATTCCCCGAAGTATTCAGAGATGTAAATTTTCAGGAAAGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGACTCTCTAATAGAGCGGGAGTAATGCTAGAGTTCGTAAGCAAAGTTATCTCACAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCAGGAGGCTGCGGTGCCTTTAGTGCGAGATTTTTATGCTAGCCTGAGGGAAGAAAGCATCAATATGGCGTAG

mRNA sequence

ATGAAGAACTTGCCCAAACAATCATCATCTCGCAAGATCACTCGATCCCAGAGTGCTCAAATCGTCCAAGAAGCTGAAGAAAGTGCTCGACATCAAGAAGAGCAACCTGACGCCCCCATGCACGGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCAGTGATCGTGAACCTGGAAACCGTCGTTCAAACTCCTTCTCCCTCGACTATGTCGGCCACCTCGAGGGAGAACCTGAGTTCATCTCAACTTAAGAGGTCCACGCGCGCCAATGTCGTCCATAAAACCCAAAAACCCGCAACCCAACAATTCAGAAAACGCTCACGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAGAGACGTGCAACTCTTGAAGAAGAAGCAAATAGATGGGATGAAGAAGAAGCCGCCAAAGCAATAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTTGTTACTTACAGTGCAAGGAGGAGGAGTCCCGAGAAAGTTGTGCCCGAAAAGCCTCTTGTCATCGAGCCCCTCAAAGTAGCAAGAATGCCCTCGGACGTGTTCGAGGACATAATCCGCCAAGCTGTGGCAAAGGCCCTTGTGATTGCCAAAGGGTATAAGGTTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGATGGAAAATCAGCACATGAGGGAAGAAGAGGAATTTGCGAGGAAAAGAGACCTTGAAGAAGAAAAGAAGAGGGCAGCTGTTGAATTGCAGCTTCTTGAGGAAGAAAAACAAAGAAGAGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCCGAATTGCTGCAAGGAAGAGAAGAAGAGGCCCAACAGGGGCCAAGTGAAAAGAACCAAGAAAAAGAAAAAGAAACAGTAGAAATAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAAGCCAGGATGAGGCCACTGAAGCTCAACCAGCTGATGAGGTTTTCGAAACCCTATTCAAAGATGACCCGCCAGCAGCTGATAGCACCTCTTTGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCAAGACCTCCAGTGACTCTAAAACAAAATCTGACTCAGATATCAAGGAATTGGATGACGACCAAGTTTCTGTCTCTGCAGCATTGAGGAAAAAGAGAAGAAGAGAAATCAGGGCTGAAAGGAGGACTAAGAACAAGAATGACCCGATATTTGCTAAGAGGCAGAGGACTAGGTCCAAGGACGCCTCTCCAACAATTCCTCCAACCGTCTCACCCGCTAAGCCGAAAGCCAGATCTCCTGAGGTTGCATCTCCTAAAAATCCATTCCCCGAAGTATTCAGAGATGTAAATTTTCAGGAAAGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGACTCTCTAATAGAGCGGGAGTAATGCTAGAGTTCGTAAGCAAAGTTATCTCACAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCAGGAGGCTGCGGTGCCTTTAGTGCGAGATTTTTATGCTAGCCTGAGGGAAGAAAGCATCAATATGGCGTAG

Coding sequence (CDS)

ATGAAGAACTTGCCCAAACAATCATCATCTCGCAAGATCACTCGATCCCAGAGTGCTCAAATCGTCCAAGAAGCTGAAGAAAGTGCTCGACATCAAGAAGAGCAACCTGACGCCCCCATGCACGGCACGAGAAGGACGAGACCTTCGAGTTTCTCACCAGTGATCGTGAACCTGGAAACCGTCGTTCAAACTCCTTCTCCCTCGACTATGTCGGCCACCTCGAGGGAGAACCTGAGTTCATCTCAACTTAAGAGGTCCACGCGCGCCAATGTCGTCCATAAAACCCAAAAACCCGCAACCCAACAATTCAGAAAACGCTCACGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAGAGACGTGCAACTCTTGAAGAAGAAGCAAATAGATGGGATGAAGAAGAAGCCGCCAAAGCAATAGAAAGCTCTCGGCAAAGAGAGGCTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGAACAAACCATTTGTTACTTACAGTGCAAGGAGGAGGAGTCCCGAGAAAGTTGTGCCCGAAAAGCCTCTTGTCATCGAGCCCCTCAAAGTAGCAAGAATGCCCTCGGACGTGTTCGAGGACATAATCCGCCAAGCTGTGGCAAAGGCCCTTGTGATTGCCAAAGGGTATAAGGTTGAACAAGAAGCCTTGAGGGAAATTGAGGCCGAGAAAGAGATGGAAAATCAGCACATGAGGGAAGAAGAGGAATTTGCGAGGAAAAGAGACCTTGAAGAAGAAAAGAAGAGGGCAGCTGTTGAATTGCAGCTTCTTGAGGAAGAAAAACAAAGAAGAGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCCGAATTGCTGCAAGGAAGAGAAGAAGAGGCCCAACAGGGGCCAAGTGAAAAGAACCAAGAAAAAGAAAAAGAAACAGTAGAAATAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAAGCCAGGATGAGGCCACTGAAGCTCAACCAGCTGATGAGGTTTTCGAAACCCTATTCAAAGATGACCCGCCAGCAGCTGATAGCACCTCTTTGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCAAGACCTCCAGTGACTCTAAAACAAAATCTGACTCAGATATCAAGGAATTGGATGACGACCAAGTTTCTGTCTCTGCAGCATTGAGGAAAAAGAGAAGAAGAGAAATCAGGGCTGAAAGGAGGACTAAGAACAAGAATGACCCGATATTTGCTAAGAGGCAGAGGACTAGGTCCAAGGACGCCTCTCCAACAATTCCTCCAACCGTCTCACCCGCTAAGCCGAAAGCCAGATCTCCTGAGGTTGCATCTCCTAAAAATCCATTCCCCGAAGTATTCAGAGATGTAAATTTTCAGGAAAGGATGGAGATTATGAGAAAAAGAGATTTCCTCAATGAGAAGGGACTCTCTAATAGAGCGGGAGTAATGCTAGAGTTCGTAAGCAAAGTTATCTCACAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCAGGAGGCTGCGGTGCCTTTAGTGCGAGATTTTTATGCTAGCCTGAGGGAAGAAAGCATCAATATGGCGTAG

Protein sequence

MKNLPKQSSSRKITRSQSAQIVQEAEESARHQEEQPDAPMHGTRRTRPSSFSPVIVNLETVVQTPSPSTMSATSRENLSSSQLKRSTRANVVHKTQKPATQQFRKRSREWFSMIQAMGAQRRATLEEEANRWDEEEAAKAIESSRQREASTGKTSEPSTNPSSSCRNKPFVTYSARRRSPEKVVPEKPLVIEPLKVARMPSDVFEDIIRQAVAKALVIAKGYKVEQEALREIEAEKEMENQHMREEEEFARKRDLEEEKKRAAVELQLLEEEKQRREELKEDEKRRKEAEDFLAAFEPLHKAQSEAELLQGREEEAQQGPSEKNQEKEKETVEIVEAQNATASGPHSEESQDEATEAQPADEVFETLFKDDPPAADSTSLGEKRDEEEKESKEVKTSSDSKTKSDSDIKELDDDQVSVSAALRKKRRREIRAERRTKNKNDPIFAKRQRTRSKDASPTIPPTVSPAKPKARSPEVASPKNPFPEVFRDVNFQERMEIMRKRDFLNEKGLSNRAGVMLEFVSKVISQYKWQEFCAHPQEAAVPLVRDFYASLREESINMA

Homology

The following BLAST results are available for this feature:

BLAST of Spg008957 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008957 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008957 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008957 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 222..242
None	No IPR available	COILS	Coil	Coil	coord: 252..290
None	No IPR available	COILS	Coil	Coil	coord: 299..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008957.1	Spg008957.1	mRNA