Spg008846 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTTCAGCAGCCAATCTAGTTTGTGCTGTTTTGGTAGCATCCATCGCTCTTAACCTTCCGCCGGAAACCACCGCAAACTCCGTCAACCTTTCTTCTCCGCCACCGGTACACAGCTCAGAGCCACGTCTCGAGAAATCATTGGACGCTGTAAAAGTTAGTTCGAAATACAAGCTTCGTCTTGCCTTTGCAGGCAAAAATGGAGATGATGAATCTGAATTACCACCATTATCGAGGGCTTTTCTTAAGCCAAGGTACCCTTGGCCAAAACGCTACGTCCCTAAATCTTCACCACCTCCATTCTAG ATGGGGTTTTCAGCAGCCAATCTAGTTTGTGCTGTTTTGGTAGCATCCATCGCTCTTAACCTTCCGCCGGAAACCACCGCAAACTCCGTCAACCTTTCTTCTCCGCCACCGGTACACAGCTCAGAGCCACGTCTCGAGAAATCATTGGACGCTGTAAAAGTTAGTTCGAAATACAAGCTTCGTCTTGCCTTTGCAGGCAAAAATGGAGATGATGAATCTGAATTACCACCATTATCGAGGGCTTTTCTTAAGCCAAGGTACCCTTGGCCAAAACGCTACGTCCCTAAATCTTCACCACCTCCATTCTAG ATGGGGTTTTCAGCAGCCAATCTAGTTTGTGCTGTTTTGGTAGCATCCATCGCTCTTAACCTTCCGCCGGAAACCACCGCAAACTCCGTCAACCTTTCTTCTCCGCCACCGGTACACAGCTCAGAGCCACGTCTCGAGAAATCATTGGACGCTGTAAAAGTTAGTTCGAAATACAAGCTTCGTCTTGCCTTTGCAGGCAAAAATGGAGATGATGAATCTGAATTACCACCATTATCGAGGGCTTTTCTTAAGCCAAGGTACCCTTGGCCAAAACGCTACGTCCCTAAATCTTCACCACCTCCATTCTAG MGFSAANLVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSPPPF Homology
BLAST of Spg008846 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of Spg008846 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 55.5 bits (132), Expect = 3.2e-04 Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Spg008846 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 7.2e-04 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Spg008846 vs. ExPASy TrEMBL
Match: A0A0A0KBD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058730 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10 Identity = 47/94 (50.00%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Spg008846 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.5e-04 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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