Spg008630 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008630
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold10: 37490994 .. 37497365 (+)
RNA-Seq ExpressionSpg008630
SyntenySpg008630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAACAGAGAAATATGGGCTAGATGTGATCACAAAAAGAAATCATTTTATTCAAGGTAATTGCGATAAAAAAGCAGTAGCCTTTATATAGGCATACTGAGAATATAATAAACAAACTTTACAACTGAAAGATTAACAAAAAGTAACTAATACAGTTGTATTTAATGAAACTAAATAACAATCAAAGATAAACTTCTAATGAGCCTTCTTAACATTTCTCTAAAATGTAAGTCAAAGAAAACATTTCCAATTCATATATTTTGGCATCATCATACATTCACAAATATTGGTGTGCTCCGTCCAGATTTGAATCAGGGTCCTAACCATTACTCTTTCTCTCTCGAAAGAGAATAACGGTCTATGATCAAACAGGGCAACCATAGAGTTTTCCATTAGGGATCCTTTTGTGATCAAGGGGGACATCGGCAAGATGGAGAGACAGGACAAGGCTGAAGAAGTGCAAAAGAAGATGGAGAAGCTCGGACTAGAAGAAGAAGAGAGGGGAAGAGTCGTGGACATTGAAGATTACGATATAGACGAAAATGACAAGTATTTTCAGAACACACTGTGATAAAGAAATAAGTGACGAACCAACTCAACCAATTACTATTGGTGAAAAGTTGCATCCATTCAAACTTGGAAAGACACCTATTCAACCAAGAGACACAATGAATCTAAAAATTCAGATTTATTCACATATTTAATGCATTATGTTCCTATTTAATTCATGTATCTGTATTTATGATCGTTCATGTATGGATTTGAAGGGTTGGGGGTTGAATCTAGGCTGCATAGATGAAGGGTTGTGTCCTTTCATGGTGTCTTTTCAATTAGTATAAATAGAGATGTAGTTTGTCCTTTGAACACAAGTTGAAGTTGAATTTGAATAAAATTTCAGATTGAGTTTAGTCTCTCTCAAGCTTTTATGCTTTCTTTGTGTTCTTGTGTTTAGAATGCATGCTAAGAACTTTCGATCTAGTCTGATCAATTAGATTATGAAGAGTTCGAAATCTTGAAGTTAGAAACGAATTCTCCTTTCTTCTTGATCTTTGATCGTTCTTTCAAGCAAAACATGTTTAACTTTCTTGGGGTTGTCTTATCATTTCGTTAATGGGGTTATTCTTATTATTGTTGTGGTGGTTCACCTGAAATAAGGGGAGTTCTTAAACGTAATTGAGATAGTTCCATTATCACGTGGAGTTGAGTAAAATTCTAGGTGTAAAACTCACGAACTCGTTGGGCGAGTATCTAGGCATGCCATTTCAAACTGGACGACAGAAAAACAAGATCTTCTGGAAGGTGAAGGATAGAGTTTGGAAAATGCTTCAAGGATGGAAAGAGAAATTATTTTCCATGGGAGGGAAGGAGATCATCATCAAAGCTGTTGCACAAGCTATCCCTTCATATACTATGGGATGTTTCAAGCTCCCAAATGCAATATGCGATGACATAAAGAAGATGTGTGCCAAGGTTTGGTGGGGCTCAGTGGGTGACAAGAACAAAGCCCACTGGATGAGCTAGAAAAGATTGTGCTTTAGCAAAGGGAAAAGGGGTTTGGGCTTTAGAGATATCGGCCTGTTCAACCAAGCTATGCTTGCTAAGCAGAGCTAGAAAATTATAAAGAACCCGAACAGTTTGCTCTCAAGAGTTCTAAGGGGGCGGTACTTCAAGCATGGGAGTTTCCTTTAGGCAAACCTTGGCTCTAATCCTTCTCTAACTTGGAGGAGTATCCTATGGGGAAGGAAGCTCTTCAAAGCGGGTATGAGATGGAGGGTGGAAAACGAGAATCATATTAGGATTGAAGACGACCGTTGGATTGGGAGAGAAGGTTTTGGTAAGCCTATGATGGTAAAAGAAGGCCTTAAAGACACTTATGTAGCTAGGCTCATTGATGATGAGGGGAGGTGGAAAGAATCGATGATTAGGGAGTCTTTTATCCCTGCGGATGCGGAAGGCATCATCAATATTCCTCTGGGAAGTAGGGAATCAAAAGATGATATCATATGGGGGCCTGATCCTAAAGGGACTTTTAATGTTAGAAGTGCCTACTATTTAGCTCAAAACCCTACTAACGCTGAAAAGGCCTCCCCATTGGATTCTTCAAAGTCTAAAGCTTGGTGGAAAGGCTTCTGGAAGCTAAAATCAACCCCTAAAGAAAAGATTTGTGCTTGGAGAGCTATCCAAAACATCCTCCCTACCCAAATTAACATCATCAACAGAGGAATTGATACTAATCCTAATTGTTTTCTATGCAGGAGCAAAGGGGAGTTCGTGGATCATGTTATTTGGGAGTGCAAGATTTCGAGGTATGTTTGGACCCATTTCTTCCCAAGCTTACGAAAGTCTTCCTGTTTGTACAGGGATAGCGGGGATCCAAATGAAAGGTGGAACGAGCTCATGGATTTGCTCATCGAGGAGGACAGAAGCAAAGCTATCAACATAATTTGGGGAATTTGGAATCACAGAAATGTAATAAAAAATAGAAACACAAAGTTAGATCCCAAGCAAATCATCAAATGCGTGGAAAACAGATTAATTGAAGATCATTATTGTAGCTTCAGCAATGGCGGATCAAATCCTCCAAGACTAGAGAGCCTTTTGAGTCAGAGTTGTTAGACCCCTCCCCCTCGGCATTGTTGGAAAATCAACACCGATGCCGCTTGGTTTGAAGACAGAGGAGTTGGAGGCATTGGGTGGATGGCTCGTGACTCAGACAGATCTTTAATTTGCACCAGATTTCGAAGAGTTGAGAGGAGATGGACGATTAAATGTCTGGAAATGAAAGCCATAAAGGAAAGTATCATAAGCTTACTCGTCTTGATGGGTGGCCCCTTTCCACGGATAACAATCAAATCTGATTCTTCTGAAGAAGACATTGCTATCCTCAACGACGAGTACTCAATGGATCTCACCGAAGTCAGGACGCTAGCAAAGGAGGCTAAATCCTTGGCAAATTGCTTCGGGGACATTTCTTTCTCAGGACATGTTTGGGAGTGATTTTAAAATGGTCAAAATTACTTTTGTCATTTTCAAAATCACTCCGAAACATGTCTTTAATAATTCAAAATTAATTTTGATGGTATGAAAATTACGTCTTAAAGTGTAAAATCAAACATAAAATTGATTTTGAATAATTAAAGATATGTTTCGGAGTGACTTCGAACATGACAAAAGTGATTTTAAACATTTCAAAATTACTCCCAAACATGCACTCATTTTGTCGGAGGGAATGTAATTTGGTAGTGCATGTTTTAGCGCGAACGATCGTTCTGCACGACCCAACGGACAGTTTGGGGGCTTTTTATCTAAGGGATCCTTTTTTGGCTTCTTCCACTTCGAGAGAAGGGTTTTTTTTTGTGTCGACTCTTTGCCTTCGTGGCTTTCCTCTTTTCTTCAAAAGGAGGGTTGTTGTATGGTTGGTTTGTGTGGCTAATGAAATATTTACTTTTTTAAAAAAAAATCATACATTCACAAATGAATGTAAGGGTTAGAGTTTTAGTTTCAAATAAAATTATTTTGATTGTCAATGTTTGAATTATTATTTTTTTCCATTATTAGTTGTATACATGTTTTTTTTTATCTAATATGCTGCTTCTAATTGGTAAACAAGTGAAACCTGGTCTACTCTATTTGGATATCATAAGGCTTCTTAGGGATAAAATTTTTTGGGTAGTTATAGTTACGTCTTGATGCAACAAGCTGGAAAAAAAAGGGAGAGGGGTCACCTTGTCTCAGGCTTCGGGTAATGTCACCTTCTTGTTCTCCATTAACATTAAAAGAGTAGCGAACCGTCGAAATAGATATATAGATTAAATCGACCCAAGCTTTTGCAAACCCCAATTTCAACATCATCTGAGTAACAAAAGGTCATTCAACCCAACCATACGCCGTCAAGGTTATTGCATCGATCAAACTTAATTTTGCACAAAACTTGATTTTATTGAAATTACTGAGTTTACATTTTTGTTAAAATTAGTGGGTGAATTAGAAGAAATTTAATCGAGGGTAAAAATTGCAACACTTGTCAAAGTTTAGTGTTCAATTTGATGAAATTGAAAGTTTATGATGAAAATTGATACAACTTAACAATTTGGTTCATAATCTTCTAAAATTATCAACTGTACCCATAATGTATTAAAAATCATCTATTTTGACCTTCCATAAAAAAAAATGTTAAAGTTTAGGTTAAAATACCATTTTGGTCCTTACACTTTAATTTGAGACTTGTTCCATTTCGGTCCCTATACTTTCAAATGTCAATTTTGGTTCTTGTACTTTGAATAAATCTTAAATTTAGTCCCTATTACAAGTTTATGATTAACTTTTTAAAAAACAAAATTAGTCTATATTAATATTCTATTTATAAAATTCTGAAACATATTCACATTGTGTATTTTCTTGAATGAAAATTATTATTATTTTTTTTTATCAATTTTGAAATTAATTTCAAACTAACAATGTAGACTAATTTTTAGATACGTTAAAAGTACAAAGGCTAAAATTAAACAAACCTCATGGTACATGGACCTTAATGATATTTTAACTTAAATGTTATTATAAAAATGTAGATATTTCATTCCATCACTGTCTTATTTATATATTTGGATTTTGAGTATGTGTGTTACCTTACATCGAATCATTGTCTTATTAAAAAAAAATGTTACATTTTTTTTCCTTCGGTAAGAAATGACTTACTGAAAATTTGTTATGCATTAAAGTTAAATTTGATAATTAAAAAAGGACCAATTTGAGAAGTACCTCAAATTATATATATATATGAGGATTTGTATCTCGTCGAGAGTATAATGTCTTTAACTAGATAATTTGAAATTGAGTCGGGGTTTGAGACAAGGGGATTCGTTGTCTCCTTATCTATCTTGTTATGTATAGAGGGGCTATCTGGTATGCTTCATGCGGTGGAGGCATCTAAGTCTATATCGGGCCTGAAGTTTTCTCGTCATGGGCCACCTGTATCCCACTTATTCTTCGTCGATGATAGCTTGTTATTTTTTGGGGCAAAGGTGAGGGAAGCCTAGGCCATCTAGGATATACTTCGATGCTATGAAAGAGCCTCAGGTCAGACAATTTACTTTGATAAGTTTACAATATCTTTCAGCCCTAGCACAGAGGCGAGTGTGTAGGAGAGTGTGAGTAGGGTCCTCCAGGTGCAACTTATTGCGTGTCACCGACAATATTTGGGTTTACTAGCCTTTATGCCTCGTAATAGATCAAGCTCCTTGAACTTTATCAAGAATTGAATGTGGAGGAAGATTTAGGGACGGAAGGGGAAGTTGTTTTCAGTGGGAGGAAGAAAAGTTCTCCTTGAATCTGTGGTTCAGGCTATCTCGTGTTATGTTATGAATTCCTTCCGGCTCTTGAATAAGCTAATCTTGGAGATTAATCGTTTAATGTCGTGGTTTTGGTGGAGTGAGGTCAAGGAGGACTGAAAAATTCACTAGGTAAGCTGGAAGAACTTGTGTAAGCCGAAATGTTATAGGGGTTTCAGTTTCAGAGACTTGGAGACCTTTAACCAGGTGCTGCTGGCAAAACAGTGTTGGAGGGTTATCCAACACCCAAACTCGCTTCTTGGGTATCGTTTGGGATAAGTGCATATTTTTTGCTCAAGTCCCATCATCATCCTCTATTGAATCGATTCACAGTTGGTGGAGAGGTTGCTGGAAAATGGCAATTCCAAGTAAGATATAAAAAAAAAATATTTTGGCGCTTAAGTCTTGATCGATTTTTGCCTATTGATAATTTTTTTCTCCTTTTGTGGTTGCCAAGGGGAAATGGTTTTGCATGTGTTCTGCTTTGTAAATACTCAAGGAACGTTATTTGTGATGTTGTTTTCGGTCCCTTCTGTCCTAAACTCTAGGCATCTGATATATTCTTTATGCTAAGAGACGCGAGGGATGAGTTGGAGTGGAGACATTTTGAGGACCTAGTGGTTTTGTTGTGGTCCATATGCAATTGCTTAAACCAGGTGAGATTTAAGGGAGTAGAGCTGTTGGGGGACTGTCTGTTTGGGCTACTGGGTATATTGAAGCTTTCCGACGGGCAAACCAGAGGAATTTGATAGGGAGTCCAGAAGGGTTGGCTAGAACTGAAATCAGGTGGAAGCCGCTAGTTGAGAACTGATACAAAATTAATGTTGATCCAACATTTCGAACTAAGCGTAGAGCAGCAGGATTAGGTGTAGTGGTGGGGAATCATGTAAGGGAGGTAATGGTTGCTGCTATAGTGTTTCACGGTTATGTTGGGTGCTCGGACATGGCTGAAGGTTGGGTTGTGGCTGACGGTTTAAGACTAACTATGGAGATGGGTTTTTTGTCTAATTGTCTTAGAAACAGACTTGAAGCGAGTCTTTGA

mRNA sequence

ATGAATAACAGAGAAATATGGGCTAGATGTGATCACAAAAAGAAATCATTTTATTCAAGGGCAACCATAGAGTTTTCCATTAGGGATCCTTTTGTGATCAAGGGGGACATCGGCAAGATGGAGAGACAGGACAAGGCTGAAGAAGTGCAAAAGAAGATGGAGAAGCTCGGACTAGAAGAAGAAGAGAGGGGAAGAGTCGTGGACATTGAAGATTACGATATAGACGAAAATGACAAGCTCATTGATGATGAGGGGAGGTGGAAAGAATCGATGATTAGGGAGTCTTTTATCCCTGCGGATGCGGAAGGCATCATCAATATTCCTCTGGGAAGTAGGGAATCAAAAGATGATATCATATGGGGGCCTGATCCTAAAGGGACTTTTAATGTTAGAAGTGCCTACTATTTAGCTCAAAACCCTACTAACGCTGAAAAGGCCTCCCCATTGGATTCTTCAAAGTCTAAAGCTTGGTGGAAAGGCTTCTGGAAGCTAAAATCAACCCCTAAAGAAAAGATTTGTGCTTGGAGAGCTATCCAAAACATCCTCCCTACCCAAATTAACATCATCAACAGAGGAATTGATACTAATCCTAATTGTTTTCTATGCAGGAGCAAAGGGGAGTTCGTGGATCATGTTATTTGGGAGTGCAAGATTTCGAGGGATAGCGGGGATCCAAATGAAAGGTGGAACGAGCTCATGGATTTGCTCATCGAGGAGGACAGAAGCAAAGCTATCAACATAATTTGGGGAATTTGGAATCACAGAAATACCCCTCCCCCTCGGCATTGTTGGAAAATCAACACCGATGCCGCTTGGTTTGAAGACAGAGGAGTTGGAGGCATTGGGTGGATGGCTCGTGACTCAGACAGATCTTTAATTTGCACCAGATTTCGAAGAGTTGAGAGGAGATGGACGATTAAATGTCTGGAAATGAAAGCCATAAAGGAAAGTATCATAAGCTTACTCGTCTTGATGGGTGGCCCCTTTCCACGGATAACAATCAAATCTGATTCTTCTGAAGAAGACATTGCTATCCTCAACGACGAGTACTCAATGGATCTCACCGAAGTCAGGACGCTAGCAAAGGAGGCTAAATCCTTGGCAAATTGCTTCGGGGACATTTCTTTCTCAGGACATGCATCTGATATATTCTTTATGCTAAGAGACGCGAGGGATGAGTTGGAGTGGAGACATTTTGAGGACCTAGTGGTTTTGTTGTGGTCCATATGCAATTGCTTAAACCAGCGTAGAGCAGCAGGATTAGGTGTAGTGGTGGGGAATCATGTAAGGGAGGTAATGGTTGCTGCTATAGTGTTTCACGGTTATGTTGGGTGCTCGGACATGGCTGAAGGTTGGGTTGTGGCTGACGGTTTAAGACTAACTATGGAGATGGGTTTTTTGTCTAATTGTCTTAGAAACAGACTTGAAGCGAGTCTTTGA

Coding sequence (CDS)

ATGAATAACAGAGAAATATGGGCTAGATGTGATCACAAAAAGAAATCATTTTATTCAAGGGCAACCATAGAGTTTTCCATTAGGGATCCTTTTGTGATCAAGGGGGACATCGGCAAGATGGAGAGACAGGACAAGGCTGAAGAAGTGCAAAAGAAGATGGAGAAGCTCGGACTAGAAGAAGAAGAGAGGGGAAGAGTCGTGGACATTGAAGATTACGATATAGACGAAAATGACAAGCTCATTGATGATGAGGGGAGGTGGAAAGAATCGATGATTAGGGAGTCTTTTATCCCTGCGGATGCGGAAGGCATCATCAATATTCCTCTGGGAAGTAGGGAATCAAAAGATGATATCATATGGGGGCCTGATCCTAAAGGGACTTTTAATGTTAGAAGTGCCTACTATTTAGCTCAAAACCCTACTAACGCTGAAAAGGCCTCCCCATTGGATTCTTCAAAGTCTAAAGCTTGGTGGAAAGGCTTCTGGAAGCTAAAATCAACCCCTAAAGAAAAGATTTGTGCTTGGAGAGCTATCCAAAACATCCTCCCTACCCAAATTAACATCATCAACAGAGGAATTGATACTAATCCTAATTGTTTTCTATGCAGGAGCAAAGGGGAGTTCGTGGATCATGTTATTTGGGAGTGCAAGATTTCGAGGGATAGCGGGGATCCAAATGAAAGGTGGAACGAGCTCATGGATTTGCTCATCGAGGAGGACAGAAGCAAAGCTATCAACATAATTTGGGGAATTTGGAATCACAGAAATACCCCTCCCCCTCGGCATTGTTGGAAAATCAACACCGATGCCGCTTGGTTTGAAGACAGAGGAGTTGGAGGCATTGGGTGGATGGCTCGTGACTCAGACAGATCTTTAATTTGCACCAGATTTCGAAGAGTTGAGAGGAGATGGACGATTAAATGTCTGGAAATGAAAGCCATAAAGGAAAGTATCATAAGCTTACTCGTCTTGATGGGTGGCCCCTTTCCACGGATAACAATCAAATCTGATTCTTCTGAAGAAGACATTGCTATCCTCAACGACGAGTACTCAATGGATCTCACCGAAGTCAGGACGCTAGCAAAGGAGGCTAAATCCTTGGCAAATTGCTTCGGGGACATTTCTTTCTCAGGACATGCATCTGATATATTCTTTATGCTAAGAGACGCGAGGGATGAGTTGGAGTGGAGACATTTTGAGGACCTAGTGGTTTTGTTGTGGTCCATATGCAATTGCTTAAACCAGCGTAGAGCAGCAGGATTAGGTGTAGTGGTGGGGAATCATGTAAGGGAGGTAATGGTTGCTGCTATAGTGTTTCACGGTTATGTTGGGTGCTCGGACATGGCTGAAGGTTGGGTTGTGGCTGACGGTTTAAGACTAACTATGGAGATGGGTTTTTTGTCTAATTGTCTTAGAAACAGACTTGAAGCGAGTCTTTGA

Protein sequence

MNNREIWARCDHKKKSFYSRATIEFSIRDPFVIKGDIGKMERQDKAEEVQKKMEKLGLEEEERGRVVDIEDYDIDENDKLIDDEGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQNPTNAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRSKGEFVDHVIWECKISRDSGDPNERWNELMDLLIEEDRSKAINIIWGIWNHRNTPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVERRWTIKCLEMKAIKESIISLLVLMGGPFPRITIKSDSSEEDIAILNDEYSMDLTEVRTLAKEAKSLANCFGDISFSGHASDIFFMLRDARDELEWRHFEDLVVLLWSICNCLNQRRAAGLGVVVGNHVREVMVAAIVFHGYVGCSDMAEGWVVADGLRLTMEMGFLSNCLRNRLEASL
Homology
BLAST of Spg008630 vs. NCBI nr
Match: XP_030936391.1 (uncharacterized protein LOC115961572 [Quercus lobata])

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-26
Identity = 86/305 (28.20%), Postives = 136/305 (44.59%), Query Frame = 0

Query: 78   DKLIDDEGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLA 137
            D L  ++G W+  +I   F+P +A+ I +IP+ +R   D +IW   P G F VRSAY LA
Sbjct: 971  DLLDSEKGEWRTEVIDTVFLPHEADSIKSIPISARLPPDKLIWSETPNGLFTVRSAYKLA 1030

Query: 138  QNPTN-AEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTN 197
             N  +   K +P D+SK +++W+  W +    K +   WRA +N LPT+ N++ R I  +
Sbjct: 1031 VNLLSMPNKGAPSDASKMRSFWRRVWSIPVPHKIRHFMWRACRNALPTKDNLLRRKIVQD 1090

Query: 198  PNCFLCRSKGEFVDHVIWECKISR-----------DSGDPNERWNELMDLLI------EE 257
              C  C+   E V HV+WEC+ +R           D G  +  + ++M  LI      EE
Sbjct: 1091 DVCEDCKETPESVFHVLWECRKAREARECSKMVFPDLGGSSLSFVDVMWKLIMQEDVGEE 1150

Query: 258  DRSKAINIIWGIWNHRN------------------------------------------- 317
              ++A    W IW++RN                                           
Sbjct: 1151 HVAQAATTAWAIWHNRNEVRCGGVRKTGRQLFSWATEYLREYRAANQLDRPVVPTPQRNV 1210

Query: 318  --TPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVERRWTIKCLEMKAI 320
              TPP    +KIN D A F  +   G+G + RDS+  L     R+++       +E KA+
Sbjct: 1211 RWTPPRDGLFKINVDGAIFIKQRAVGVGVVIRDSEGRLEAALSRKIQMPLGAAEVEAKAV 1270

BLAST of Spg008630 vs. NCBI nr
Match: XP_023905045.1 (uncharacterized protein LOC112016795 [Quercus suber])

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-25
Identity = 79/271 (29.15%), Postives = 124/271 (45.76%), Query Frame = 0

Query: 79   KLIDD-EGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLA 138
            +LID+  G W   +++  F+P DA  I+ IP  S+ ++D +IW   PKGTF V SAY +A
Sbjct: 970  ELIDEVTGEWNVDLVKHVFLPDDAHTILGIPRSSKRNRDRMIWAYTPKGTFTVNSAYKVA 1029

Query: 139  QNPTNAE-KASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTN 198
             + + ++ K    D+S    +W+  W L+   K K  AWRA +NILPT+ N+ +RG+  +
Sbjct: 1030 LSLSQSKAKEETSDASSHSQFWQKIWSLRIPNKLKTFAWRASRNILPTKANLCSRGVIDD 1089

Query: 199  PNCFLCRSKGEFVDHVIWECKISRD----SGDPNE----RWNELMDLLI---------EE 258
            P C  C    E   H+ W+C+ + +    +G P +     + + +DLL          ++
Sbjct: 1090 PTCDACGLNAETSGHLFWDCRHAHEVWTATGIPFDNLGVHYRDFIDLLWYLIFRQHVGQD 1149

Query: 259  DRSKAINIIWGIWNHRN------------------------------------------- 288
                 I I W +W +RN                                           
Sbjct: 1150 VLELIITIAWCMWYNRNRVRHGSPRQSSNEILHKARTVMEDFQLAHFACPQPTDPLDTRW 1209

BLAST of Spg008630 vs. NCBI nr
Match: TXG72826.1 (hypothetical protein EZV62_001405 [Acer yangbiense])

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-25
Identity = 77/292 (26.37%), Postives = 130/292 (44.52%), Query Frame = 0

Query: 85  GRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQNPTNAE 144
           G W ES+IR+SF+  +A+ II++P  S  SKD ++W     G +++RS Y+ + +     
Sbjct: 22  GEWNESLIRDSFVAEEADAIISLPPSSSNSKDRLMWHYHSSGVYSMRSGYWPSSSSFGNP 81

Query: 145 KASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRS 204
             + L  S+S  WWK FW L   PK K+  W+A  N +P + N++  G+D    C +C  
Sbjct: 82  SCAGLSCSES--WWKFFWHLDLPPKIKLFMWKACHNWIPARCNLMAHGMDLEVTCLICGK 141

Query: 205 KGEFVDHVIWECK---------------ISRDSGDPNERWNELMDLLIEEDRSKAINIIW 264
             E   H +W C                 S D     E        +   D  +   I W
Sbjct: 142 SAEPSLHALWHCSSLKVLQNACVFAAGDSSLDCAPFGEFVRSCSFKMKVTDFERLCVIWW 201

Query: 265 GIWNHRN--------TPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVE 324
            +W+  N         P    C  ++   + F+D  V G+G +ARDS   ++ +  R V+
Sbjct: 202 RVWHRSNMAVHNNILLPVSDICAWVDNFCSDFQDANVSGLGVVARDSSGQVLISLCRNVK 261

Query: 325 RRWTIKCLEMKAIKESI-ISLLVLMGGPFPRITIKSDSSEEDIAILNDEYSM 353
             +  +  E  AI E + +++        PR++ K       + ++ND+ S+
Sbjct: 262 ANYQPQIAEALAIIEGLRLAIDRGFSNFVPRLSNKVAHGLAKLDLINDDVSV 311

BLAST of Spg008630 vs. NCBI nr
Match: XP_023906648.1 (uncharacterized protein LOC112018352 [Quercus suber])

HSP 1 Score: 125.9 bits (315), Expect = 9.1e-25
Identity = 75/233 (32.19%), Postives = 112/233 (48.07%), Query Frame = 0

Query: 80  LID-DEGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQ 139
           LID D  RW+  +I+  F+P +A+ I+NIP+     +D IIW  + KG F+V+SAYY+A 
Sbjct: 5   LIDYDTRRWRADLIQSIFLPCEAKTILNIPISYNLPEDKIIWVANKKGLFSVKSAYYVAL 64

Query: 140 NPT-NAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNP 199
           N   N+E+         +  WK  W L  + K KI  WRA  + LPT +N+  RGI  N 
Sbjct: 65  NMVDNSEEGENSCGDPRERLWKKVWHLNISSKIKIFTWRACVDALPTMVNLRKRGIGENV 124

Query: 200 NCFLCRSKGEFVDHVIWECKISRDSGDPNE--------RWNELMDLLIE-------EDRS 259
            C  C  + E + H I +C++++   D  E        R  ++ D+ ++       +D  
Sbjct: 125 FCSCCGREVESIFHTIIKCEMAKGVSDYWEVQIVENGPRLCDISDIAMQILNKGTAQDLE 184

Query: 260 KAINIIWGIW-------------NHRNTPPPRHCWKINTDAAWFEDRGVGGIG 283
               + W IW             N R TPPP   +K+N D A  ED     +G
Sbjct: 185 IFFGVAWSIWGARMSLNKRQEARNCRWTPPPPRVFKVNVDGATSEDGRHSSVG 237

BLAST of Spg008630 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 9.1e-25
Identity = 62/189 (32.80%), Postives = 103/189 (54.50%), Query Frame = 0

Query: 80  LID-DEGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLA- 139
           L+D +EG W+  ++R+ F P +A+GI++IP+G    +D +IW  +  G ++VRS Y +A 
Sbjct: 756 LVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVAL 815

Query: 140 -QNPTNAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTN 199
             NP   +  S   S + + WW GFWK+    K K+  WR   + LPT  N+  RG++  
Sbjct: 816 LNNPC-VQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEIT 875

Query: 200 PNCFLCRSKGEFVDHVIWECKISRDSGDPNERWNELMDLLIEEDRSKAIN---------I 257
             C+ C   GE   H+ W CK + ++   N ++ +L   LI  +  ++++         +
Sbjct: 876 NCCYFCGRNGEDSIHLFWICKFA-EALWINSKFGKLSPFLILRESHESLSKADFEELCVV 935

BLAST of Spg008630 vs. ExPASy TrEMBL
Match: A0A2N9F2A9 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8891 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-26
Identity = 90/332 (27.11%), Postives = 145/332 (43.67%), Query Frame = 0

Query: 80  LIDDEGR-WKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQ 139
           LID + R WK  ++ E F+P +A  I+ IPL  R   D ++WG    G ++VRS Y    
Sbjct: 347 LIDPDLRIWKAGLVNELFLPHEATAILGIPLSHRSLTDCLVWGATKNGVYSVRSGYKFLL 406

Query: 140 NPTNAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPN 199
           N ++ E     D ++    WK  W L   PK +   WRA  N LPT+ N+ +R I  +P+
Sbjct: 407 NESHREDPGSSDPTRMSQLWKSVWSLNVPPKIRHFLWRACHNSLPTKSNLHHRHILDDPS 466

Query: 200 CFLCRSKGEFVDHVIWECK--------ISRDSGDPNERWNELMDLL------IEEDRSKA 259
           C  C  + E   H +W+CK        IS  S      +   +DLL      +     + 
Sbjct: 467 CTNCSYQSESTIHALWQCKMVQPVWQSISWGSKLGASNFMGFIDLLHQCFSILSPSEVQL 526

Query: 260 INII-WGIWNHRN-----------------------TPPPRHCWKINTDAAWFEDRGVGG 319
            ++I W IW  RN                        PP +  +K+N D A F D    G
Sbjct: 527 FSMISWSIWYRRNRLRLQQPADNNFQVPGSVELVKWNPPAQGSYKVNYDGAVFSDFNAAG 586

Query: 320 IGWMARDSDRSLICTRFRRVERRWTIKCLEMKAIKESIISLLVLMGGPFPRITIKSDSSE 368
           IG + R+    ++ +   R+    +++ LE  A + S I     +G  F +  ++ DS  
Sbjct: 587 IGVIVRNHQGEVMGSLSHRIPFPHSVEALEASAAR-SAIQFAKDLG--FTKFVLEGDSKT 646

BLAST of Spg008630 vs. ExPASy TrEMBL
Match: A0A2N9IYL5 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57874 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.8e-26
Identity = 81/294 (27.55%), Postives = 139/294 (47.28%), Query Frame = 0

Query: 80   LIDDEGR-WKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQ 139
            LID + R WK  ++ E F+P +A  I+ IPL  R   D ++WG    G ++VRS Y    
Sbjct: 1148 LIDPDLRIWKAGLVNELFLPHEATAILGIPLSHRSLTDCLVWGATKNGVYSVRSGYKFLL 1207

Query: 140  NPTNAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPN 199
            N ++ E     D ++    WK  W L   PK +   WRA  N LPT+ N+ +R I  +P+
Sbjct: 1208 NESHREDPGSSDPTRMSQLWKSVWSLNVPPKIRHFLWRACHNSLPTKSNLHHRHILDDPS 1267

Query: 200  CFLCRSKGEFVDHVIWECKISRDSGDPNERWNELMDLLIEEDRSKAINIIWGIWNHRNTP 259
            C  C  + E   H +W+CK+ +        W  +      ++   ++ ++   WN    P
Sbjct: 1268 CTNCSYQSESTIHALWQCKMVQPV------WQSIS--WGSQNLPGSVELV--KWN----P 1327

Query: 260  PPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVERRWTIKCLEMKAIKESI 319
            P +  +K+N D A F D    GIG + R+    ++ +   R+    +++ LE  A + S 
Sbjct: 1328 PAQGSYKVNYDGAVFSDFNAAGIGVIVRNHQGEVMGSLSHRIPFPHSVEALEASAAR-SA 1387

Query: 320  ISLLVLMGGPFPRITIKSDSSEEDIAILNDE-----YSMDLTEVRTLAKEAKSL 368
            I     +G  F +  ++ DS     A+L  E     Y   + +++ +A+  +S+
Sbjct: 1388 IQFAKDLG--FTKFVLEGDSKTVVDALLLREPCTTIYGHIIDDIKQIAQSLQSV 1424

BLAST of Spg008630 vs. ExPASy TrEMBL
Match: A0A5C7IWD5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001405 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-25
Identity = 77/292 (26.37%), Postives = 130/292 (44.52%), Query Frame = 0

Query: 85  GRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQNPTNAE 144
           G W ES+IR+SF+  +A+ II++P  S  SKD ++W     G +++RS Y+ + +     
Sbjct: 22  GEWNESLIRDSFVAEEADAIISLPPSSSNSKDRLMWHYHSSGVYSMRSGYWPSSSSFGNP 81

Query: 145 KASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRS 204
             + L  S+S  WWK FW L   PK K+  W+A  N +P + N++  G+D    C +C  
Sbjct: 82  SCAGLSCSES--WWKFFWHLDLPPKIKLFMWKACHNWIPARCNLMAHGMDLEVTCLICGK 141

Query: 205 KGEFVDHVIWECK---------------ISRDSGDPNERWNELMDLLIEEDRSKAINIIW 264
             E   H +W C                 S D     E        +   D  +   I W
Sbjct: 142 SAEPSLHALWHCSSLKVLQNACVFAAGDSSLDCAPFGEFVRSCSFKMKVTDFERLCVIWW 201

Query: 265 GIWNHRN--------TPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVE 324
            +W+  N         P    C  ++   + F+D  V G+G +ARDS   ++ +  R V+
Sbjct: 202 RVWHRSNMAVHNNILLPVSDICAWVDNFCSDFQDANVSGLGVVARDSSGQVLISLCRNVK 261

Query: 325 RRWTIKCLEMKAIKESI-ISLLVLMGGPFPRITIKSDSSEEDIAILNDEYSM 353
             +  +  E  AI E + +++        PR++ K       + ++ND+ S+
Sbjct: 262 ANYQPQIAEALAIIEGLRLAIDRGFSNFVPRLSNKVAHGLAKLDLINDDVSV 311

BLAST of Spg008630 vs. ExPASy TrEMBL
Match: A0A2N9IWN7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56441 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-25
Identity = 71/234 (30.34%), Postives = 107/234 (45.73%), Query Frame = 0

Query: 86   RWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRSAYYLAQNPTNAEK 145
            +WKE +I   F+P +A  I+ IPL  + ++D IIW   P G F++RSAY+        + 
Sbjct: 1551 KWKERVINHVFLPLEASLILGIPLSLQAAQDKIIWPHTPSGIFSIRSAYHFLLTVHQGDT 1610

Query: 146  ASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRSK 205
             S  ++S     W   W L   PK +   WRA ++ LPT+ N+  R +  +P C  C S 
Sbjct: 1611 PSSSNNSTGPGLWNKIWDLPIPPKIRHFLWRASRDALPTKSNLRRRKVLVDPICDECHSS 1670

Query: 206  GEFVDHVIWECKISRDSGDPNERWNE---------------LMDLLIEEDRSKAINIIWG 265
             E + HVIW C ++    + +  +++               +MD   EE +       W 
Sbjct: 1671 EEDIFHVIWNCPVAHQLWNNSPMFSQALIDRPSSFKDLFTLIMDSSSEELQCMFAIQAWL 1730

Query: 266  IWNHRN-------------TPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRS 292
            +W HRN             +PP R  WKIN + A+ E   + GIG M  D   S
Sbjct: 1731 LWYHRNKGRAENVWDEIKWSPPFRGKWKINFNGAFSEGSQMAGIGVMVHDQSGS 1784

BLAST of Spg008630 vs. ExPASy TrEMBL
Match: A0A2N9EYC3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7737 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-25
Identity = 90/362 (24.86%), Postives = 148/362 (40.88%), Query Frame = 0

Query: 74   IDENDKLID-DEGRWKESMIRESFIPADAEGIINIPLGSRESKDDIIWGPDPKGTFNVRS 133
            I   + LID D   WK  +++E F+P +A  I+ IPL  R   D ++WG   +G + VRS
Sbjct: 1223 ISHVEHLIDSDLKSWKTELVKELFLPQEATTILGIPLSFRNPADSLVWGATKQGVYTVRS 1282

Query: 134  AYYLAQNPTNAEKASPLDSSKSKAWWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRG 193
             Y+L  N  N ++  P D++K    WK  W L+   K +   WRA  + LPT+ N+ +R 
Sbjct: 1283 GYHLLFNDRNQDEPGPSDTTKMSQLWKAIWSLQIPSKTRHFLWRACHSSLPTRSNLHHRH 1342

Query: 194  IDTNPNCFLCRSKGEFVDHVIWECK--------ISRDSGDPNERWNELMDLLIEEDRSKA 253
            I  +P C  C  + E   H +W+CK        I          + + +DL+ +   + +
Sbjct: 1343 ILDDPRCSSCTDQIESTIHALWQCKSIVPLWHSIPWGQKLSKTSYTDCIDLIYQCTLTLS 1402

Query: 254  IN-------IIWGIWNHRN----------------------------------------- 313
             N       I W IW  RN                                         
Sbjct: 1403 TNEFQLFAVICWSIWYRRNRLRLQQPADTNTQLIRRARETLLEFHEAQDRGKQRSLQSNS 1462

Query: 314  ------TPPPRHCWKINTDAAWFEDRGVGGIGWMARDSDRSLICTRFRRVERRWTIKCLE 368
                   PP    +K+N D A F DR   GIG + R+    ++    +R+    +++ +E
Sbjct: 1463 TTVIKWKPPEDRRYKVNYDGAVFNDRNEAGIGVIIRNHRGEVMGALSQRIPYPHSVEAVE 1522

BLAST of Spg008630 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-07
Identity = 33/114 (28.95%), Postives = 51/114 (44.74%), Query Frame = 0

Query: 162 WKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRSKGEFVDHVIWEC----K 221
           WKLK+ PK K   W+ +   L T  N+  R I  +P C  C  + E   H+ ++C    +
Sbjct: 19  WKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQ 78

Query: 222 ISRDSGDPNER-------WNELMDLLIEEDRSK--------AINIIWGIWNHRN 257
           + R SG P++            M+LL+    +         AI I+W +W  RN
Sbjct: 79  VWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRN 132

BLAST of Spg008630 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-06
Identity = 21/64 (32.81%), Postives = 34/64 (53.12%), Query Frame = 0

Query: 157 WWKGFWKLKSTPKEKICAWRAIQNILPTQINIINRGIDTNPNCFLCRSKGEFVDHVIWEC 216
           W    W LK +PK K+  W+A+ N LP    +++R I   P C  CR   E + H+++ C
Sbjct: 5   WIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRD-FETITHILFNC 64

Query: 217 KISR 221
             ++
Sbjct: 65  PFAQ 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030936391.12.8e-2628.20uncharacterized protein LOC115961572 [Quercus lobata][more]
XP_023905045.11.8e-2529.15uncharacterized protein LOC112016795 [Quercus suber][more]
TXG72826.12.4e-2526.37hypothetical protein EZV62_001405 [Acer yangbiense][more]
XP_023906648.19.1e-2532.19uncharacterized protein LOC112018352 [Quercus suber][more]
XP_022150918.19.1e-2532.80uncharacterized protein LOC111018954 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9F2A93.0e-2627.11RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8891 P... [more]
A0A2N9IYL56.8e-2627.55RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57874 ... [more]
A0A5C7IWD51.2e-2526.37Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001405 PE=4 SV=1[more]
A0A2N9IWN71.5e-2530.34Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56441 PE=4 SV=1[more]
A0A2N9EYC32.0e-2524.86Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
AT3G25270.12.4e-0728.95Ribonuclease H-like superfamily protein [more]
AT3G26855.11.2e-0632.81RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 63..324
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 63..324
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 128..220
e-value: 5.8E-16
score: 59.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 264..382
e-value: 5.2E-6
score: 28.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 263..339

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008630.1Spg008630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding