Spg008575 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008575
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontrafficking protein particle complex subunit 2
Locationscaffold10: 32579129 .. 32585607 (-)
RNA-Seq ExpressionSpg008575
SyntenySpg008575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGGAAGTTGCATAGTTTTTATTTTTATTTTTAATTTTTTTGAGAAAAAGATATTTCATTATCAAGATAAACTTTCCACTGAGATATCAACTGAGGGACCGGATCCCACTCTTATTTGATTTCCAAACCGAATGTCTACATTATTTAACTCAATCAACCAACTAGGAAAATAATTACTCCAACTTAAGGATTCTCCACTTAAACTTTTACAAGCCAAGTGGTGCGCCATTCTATTGTCTTCTCTTCTCACATGAGCAATTAACTCAATGTTAAGGTCTTCCATTAGGGCACGAGCATCATGAATGAAGACAGAAATTTCTGTCTCGTTTTCGTCCCTGAGGAGTAGGAGGTTAACGACCTGTAAGGCGTCAGATTCCACCCGAATCTTTGGTGATCGGACAAACCGCCATAGCTTCCAACCACGAAATTTTCCATTGGCATCTGTATCCAGCTGCGATAGGAGATCCATTCCAATCGCGAAGAATCCATCCAACACCTCTCATCTTCTGATTGTCGCTCCAAGTTGCATCACACGACAATTTCCAAACTCCTCTCGGCGGTGGAATCCAGGCCATCGGTGGTTGATCATATCTTTGGGCTTGTGTTCTCGACAATCTCTGAGGAGTCCCTTCGCTGCAATTGAATTCCTCCAGGTAGCCTTCAATTTGCTGCATAATTTTCTTTTGGTTGGGCTGCTGGTTGTTGTGATATATTTCATTTCTATGCTGCCAAATTTGCCAACAGATGACTAAACTTGTTTTCAAGCTCTTCTCCTCTACTCTGTCTCCCCCATCTGCATTCCAGAATTTTTTGCAGTAATCTTTTGTGCTCCAGCCCATCCTGCCATCCAAACAGACTAAGTTATTAGAAGAAAAATAATTCGCCCAGATCCCCTTTGCAAATTTACACTCCCAGAATAGATGTTCCACCGTCTCCATCTTTTTCCTGCACATAAAGCAAATTGGATTAATGTTCATTCTCTTATTTATCAGATTAGATAAAGTAGGAATGATGTTGTTGTATATTTTCCATCCACATAGTTTGATTTTGGGTGGTAGCTTTGATTTCCAGTAACACTTCCATAGGATTTCTGTGTGCTTGGAACTTGAAGTAGAAGCTTCCTCATTTTGCTTAAGAGTCCTGCCCAGCCTATAAGCGCTCTTTACAGAAAATTGTCCCTTCGGGTGTAAATGCCAAATTATCTCGTCCTCCCTCATCCTGGGATTTATTGGAATGTTAACAATGATCTTAGCATCTTCTTCACAGAAAGAGGCTTCCTTTTCAATAAAATGAGCCACACTAAGATGTTGGATACTTGGATGTGCTATTATAGGTCTACCCGAACCTTCCTTAGGAATCTAAGGATCTTTTGAAGCATCTATCAATATTCCATTTCCAACCCACCATCTATATCCTTTCATGAATAATTCACTTCCCCAAACTATGCTTCTCCAAACATAAGAAGGGTCATGTCCTATTGGTGCTTTGAGGAAATTCCCAGTTTTGTAGGATCTTCCCCGAAGCACCTTTGCTAACAAGCTATTTGGGTTTCTTATTAGCCTCCAACTTTGCTTTGCAAGCATGGCCTGGTTGAAGGTGGCGATATCTCTGGCTTTTATGATCACACAACTTGCTCCATCTTCTCCAATGGATTTTCTTCTCTGTCTCCATTGTTCCCCACCAAAACCTGGCAAACATAGAGTTCAGCTCATTACATAATGATAAAGGAAATTTAAAACAACTCATAGCATAGTTGGGGATAGCTTGAGCTACTGAAGCTACTGATTTAATAAGAATTTCCCTGCCAGCCATTGAAAAGAACTTTCCTTTCCAGCCTTGTAGAGCTCGCCAAACTTTGTCTTTGATTGTATTAAAAATCTCCTTCTTGTTCCGAGCATTTTGTGAGGGGAGACCTAGATATTGCCCCAGACTCTCGTGAAAGGAACCTGCAAAATATCTTTTATAATATTCTTACTCTCCGTAGTGGTATTGGGGCTCACCATAAACATTGATTTCTCATAGTTTACTGTTTGCCCCGAAGCTTCCTCATATGTCATTAGAAGGTTCTTGATTATCCTGCAATCTTTGTCAGTAGCTTTGAAAAACAAGAGACTATCATCGGCATAAAATAAGTGGGTTATGGTGGGACAGTATTTATTAATTCGCAAACCTGAGAATTCCTTCTTGATTTAGAAGGCTCGACATTCCTTCCGCACAAATCGAGAAAAGTTAAGGGGATATGGGATCCCCTTGTCGAAGACCTCTTGAAGGTTTGAATTCACCTCTCGGAACTCCGTTTAGAAGCACTTGGAAGCTAACTGTTTCCACGCAACCCATAATAAGATCAATCCATTTACTATTAAAACCCATCTTATTCATCATCCTCCTAAGGTAGCTCCATTCCACTTTATCATAAGCCTTACTCATATCCAACTTTTTTATTTCTGATCGCGTGAATACATTCAAACCCTAGGATTTCTTTAGTCAAGAAAAGAATGAATGGCTCCCACAAAAATGTGCCCTTAAAATCCACTTAGAAATTGGAAGTCTTTGAGAAATCACTCCAAAAAAAGTGAAAAGATGAGCCAATCCTCTTTCTAACAAAGGACAACCATTAAAGATATAAAACCACCAAATGGCCTTTTTTTTTTGTTAGTTTTTTTTTTCTTACCATTTTTATGCTCTTTCTAAACTTCAAAGTTTCACTCAAAAATCATTTGACAAAAAGCATATAAAGGGATAAAATACTACCATCTTTGCCTTTTTTTTTCCCTCCTTTTTCATCTTTTTGACTCTTGGAAACTCATCTTTGCTTGAATGATGTCGGTTCATACTACAATATGAATTAGTGTATATTGACGTGCCTTTTAAAATTTTAGATTTTTTAAAATGATGTTACTTACGGTTTTAGATTTAATTGAAGGTGGTTGTCAAATTCGATTTTTCTCATCCTTAAAATGTTAGCTTCTTTTTTGTTTTGAATTAGTTGGTTAAAATTAGATGTATTATCTTTCTAAAAAGTCTAATAGGAGATCTTTTGTCCATTTTAATTGTTAATATTATAATAAAATTACTTAGTCATTATTTAATTTATAAAGATAATTAGACATTTTTAAACTCGAGATATTAAATCTAGCAATTTTTATTGTTGCCAAAGTAAAGATACCCCAAGCCCAGCCGGTCTGGCCTCCCTCTCTCATCCCCCTCCACCGGCAAAATCCTGAATTGCTTCTCAGAAATGGCGACCACGGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAGTATTTCCTTGTTCTCCATTTTCCATTTTTTAATGTTTAGATTGCATCTTTCCTTCGCGAGATCGCCAATGGAACATGATTTCATTTTGGTTCTTTAATTACTTTAGTTTTGACTGTCCTTAGTCGCTCATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCTGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTGAGTTCTTATTCTTTTACTTTTTTGATAGATCATCTGATACCTCTTTTCTCTTCTTTTTCCCTTTGAATTTCCCTCTAGATCCTTCTTCTTGGTGCGTTTCATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTGTATGTAACCGCTGGTCATATCCTTTAATGTCGAGGGGTTTTGTCGAGAACAGTGTGCTGGAAATTGAGTCTAATTTTATCATTTACTCTCTCATAAAGGATAGCTCTAAATTAACAAAAGTTTTACTTTTGGATCTTTTGGATCTATACCTCCAGCCCCCAATTGCATTACTGAAGATTTTTTGTTTTATTTTATTTTTTTTTGTTAGTTTAACTGATTAAAAACTCGTAATCCTTTTTGAAGGCAATTCAAATTTTTTCATTGTACGGGACACATGTTGTACTATGGTTCTGGCATTCTATATACATTTGAGAGATTAAATTCAGTATATAGTTCCTATTATTTCCTTTTATACCAATGTTCTGGTTTTTCTTTGACTATTCACTACATACGCGGTTGATGTTACTTCATGACTCTCGCAATGATGATGGAATCAAGAACTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTTGACATGTTTCTTAGGTATTATTATTATTATTATTATTATTATTATTGCCATTTTTTTGAAGGTATGGTGCTTGATTTACTATGTTTTATTATTTAGGTTGATTAAAGTATACCTTAGTTGATTAGTTCGTACTAGATGTAGTTCATTATTTCTTCTCAAATATTCTGAATTCTGACCTTGGAATGGTACAGTTGTTAAATGAATATATTGTATCACTTGAGTCTTAATTGTATATATCCAAGAGTAAGTGGTTGATTTGTTATGAGATCAGGTCGTCGTCTTGAGGTTGTATGAAGCTTGAGATGGGTGGGAGAGGATTGTTCAGTTTTTGGGATCCCTTGTTTGGTCGTGACAGGATACTCAGATTTAAGGCTCCTTTAGATCCCTACAATATGTTGTGGTTGTTGTTTCTGTAGGACAGGACTTGTGACCTATTTCTTCTAGGAAAATTAATTGGTTTTTGGAACTAAAGTTGATAGAATGATTTAAAATCATGTGGTAGAGTTAGAAAATATTGTTAATAATTTGTCTAGTGGGTTGAAAGTAAGATTTCCTCATCGTAATTTAATTGCTGAAAGAACTATTTGTAGAAACACTATGTTTGGGACATACCAAAATTTAATTTCCTTTGAAGTTTCCTTTAGCACTATGCTTGACTTGGTTGCATCACGTAGAACAAAATGGACAAGAATAAGTGATAGGTAAATTCACGTTAACTTGTCTGTCATCTACTCCTGATTTTAATGAAAATTTTTTCTATTATAGATTTAAAATTTTCTTTTTCATTAGTTAATCAGAGTTAGAATGCTTGAGGCATGCTTTTGAATAGCAGAAAAGTGCAGTCAAGAGGGGAGTGTAATTGTTGTCCTGCTTATTTGTAACTGCTATCATAATACTATGTTCCTGAGTGCCTCCCATCCCCACTACTTACTTTTCCATTTTAGTAACTGCAAATGAAATTTAAAGTTTTCTTGATGATTCTAGATTGATTTTTCTATATTAGAACTTCTGTTAACTACTCTCCTTCGTTGATTATTATAAATCTCTTTTGGCTTTTAGCTACCATCTTAGACCAAAGTTAGTATTCCTATCAAATTCTGTAAGTTTCATCAAGTTAGGATTTCAAGACCTTAAATTTCATGTTTAGCCTAACATAAGATAAAAGGTTTGGCACTTTGGTTTGATGACCTGCCGTCTACTCTCTGTCTCTCCAATTTTTGAAACTTCATGGACGGTGTAACATTGTTGATGCAAAGATTTTTCTCAATGAAAGTTGGTTTCTTAAAAAAAATAATAAAACAAAATAAAAAATTGACAGGAGTGATAAATAATTTTGAGGACTACTTTTTATATTTTATGATCTTACCATTCCAGTTGACAAGCAAGGAGCCTAATCTCTTGATTCATGGCAATTTCTGCTGTATATAATCTTTCATGGCAAAATTTTTTTGACTTTTTCCAGAACATATCCTAGAAATCTTAATTATAGCCTCACCTCATCTCTCCTATGCTATGTGCATGTATAAGTACACGATCTCCAGTTTTTGGAAACTCTATCACAGTCAACCTTTTTAGAGAAATTGTGCAACTGAAGTTATTAAACTTTTGATAGTTATTCAAGTTATGAGTGTATATAGACTTTGTATTTCCTTGGATGTGATTTTTCAGCTTTAAATCAAATTTACTTGAATCTCAATATATGTCGGGGAACCATTTGTTAGTTGAGGAGTTCTGGTCTTTTTTGTGCCTCCCATGTTTTCTATGAATAGCTGTGGCATGAAGTTTGTTGTCTTCCAAGTTTTTCTCTATTGTTGCCATGGGTTTTCATTTGGTGACAATTGTCAACTTGATTATGCTCATGACTGAAAATGGCTTTGTGAATTTGCAGACTATACTTAATCCCCTCTACTTGCCCGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTCCGTGCACTCGCAAGAAAGTATCTCTAGTGTTTACCTTGATTGCAGACCAAATGTGCTTTGTAACAATGAGCTTCAACGTTTCTAGCAGCCTTGAGTTTTCTACAATTGCATAACATTTTGATCTTTGCTACTGTTAGTCCTGATGTTAATCAACTCGTTAAATATTGCTTAGTGTATTATTGACATTTGTATGACCTGATTACTAAACGAGCAGGAATTGCACTTTACAGCATTGATGTAATGCCCTCTCCGCTCCCTTTACTCATCTTTTTGTAGTAGGGAGTATTATTATGTTTTATATTCTACAAGACATGGATACTAAAAATCATG

mRNA sequence

ATGGCGACCACGGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTACTATACTTAATCCCCTCTACTTGCCCGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTCCGTGCACTCGCAAGAAAGTATCTCTAGTGTTTACCTTGATTGCAGACCAAATGTGCTTTGTAACAATGAGCTTCAACGTTTCTAG

Coding sequence (CDS)

ATGGCGACCACGGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTACTATACTTAATCCCCTCTACTTGCCCGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTCCGTGCACTCGCAAGAAAGTATCTCTAGTGTTTACCTTGATTGCAGACCAAATGTGCTTTGTAACAATGAGCTTCAACGTTTCTAG

Protein sequence

MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVLYLIPSTCPDPASHLHISTQKSVHSQESISSVYLDCRPNVLCNNELQRF
Homology
[Close]
BLAST of Spg008575 vs. NCBI nr
Match: XP_022970900.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. NCBI nr
Match: XP_022947789.1 (transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_022970901.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita maxima] >XP_023534751.1 transport protein particle 20 kDa subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. NCBI nr
Match: XP_022947788.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. NCBI nr
Match: KAG7034830.1 (Trafficking protein particle complex subunit 2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. NCBI nr
Match: KAG6604699.1 (Trafficking protein particle complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match: Q9VUZ1 (Probable trafficking protein particle complex subunit 2 OS=Drosophila melanogaster OX=7227 GN=Trs20 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0 

Query: 3  TTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLK 62
          +T  F+IV +N+ PIYE E   V    ++ED   L QFI HA+LD+V +  W T+ M LK
Sbjct: 2  STYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLK 61

Query: 63 AVDRFNDLVVS 71
          ++DRFN   VS
Sbjct: 62 SIDRFNQWFVS 72

[Close]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match: Q3T0F2 (Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 1   MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVLYLIPSTCPDPASHLHISTQKSVHSQESISSVYLD 107
           LK VD+FN+  VS            A H+       V  ++ I + + D
Sbjct: 61  LKTVDKFNEWFVSAFV--------TAGHMRFIMLHDVRQEDGIKNFFTD 101

[Close]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match: F1SRI0 (Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 1   MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVLYLIPSTCPDPASHLHISTQKSVHSQESISSVYLD 107
           LK VD+FN+  VS            A H+       V  ++ I + + D
Sbjct: 61  LKTVDKFNEWFVSAFV--------TAGHMRFIMLHDVRQEDGIKNFFTD 101

[Close]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match: Q5RES6 (Trafficking protein particle complex subunit 2 OS=Pongo abelii OX=9601 GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 1   MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVLYLIPSTCPDPASHLHISTQKSVHSQESISSVYLD 107
           LK VD+FN+  VS            A H+       V  ++ I + + D
Sbjct: 61  LKTVDKFNEWFVSAFV--------TAGHMRFIMLHDVRQEDGIKNFFTD 101

[Close]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match: P0DI81 (Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09
Identity = 33/109 (30.28%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 1   MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVLYLIPSTCPDPASHLHISTQKSVHSQESISSVYLD 107
           LK VD+FN+  VS            A H+       +  ++ I + + D
Sbjct: 61  LKTVDKFNEWFVSAFV--------TAGHMRFIMLHDIRQEDGIKNFFTD 101

[Close]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match: A0A6J1I468 (trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469735 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match: A0A6J1I1U1 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469735 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match: A0A6J1G7X4 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451547 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match: A0A6J1G7K7 (trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451547 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match: A0A0A0LQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

[Close]
BLAST of Spg008575 vs. TAIR 10
Match: AT1G80500.1 (SNARE-like superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 64/71 (90.14%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIV RN+IPIYEAEVGSAAKRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1  MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61 VDRFNDLVVSV 72
          VDRFNDLVVSV
Sbjct: 61 VDRFNDLVVSV 71

The following BLAST results are available for this feature:
BLAST of Spg008575 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022970900.18.9e-30100.00trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima][more]
XP_022947789.18.9e-30100.00transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_02... [more]
XP_022947788.18.9e-30100.00trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata][more]
KAG7034830.18.9e-30100.00Trafficking protein particle complex subunit 2B [Cucurbita argyrosperma subsp. a... [more]
KAG6604699.18.9e-30100.00Trafficking protein particle complex subunit 2, partial [Cucurbita argyrosperma ... [more]
BLAST of Spg008575 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9VUZ12.4e-0946.48Probable trafficking protein particle complex subunit 2 OS=Drosophila melanogast... [more]
Q3T0F23.1e-0931.19Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 ... [more]
F1SRI03.1e-0931.19Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 ... [more]
Q5RES63.1e-0931.19Trafficking protein particle complex subunit 2 OS=Pongo abelii OX=9601 GN=TRAPPC... [more]
P0DI814.1e-0930.28Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC... [more]
BLAST of Spg008575 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4684.3e-30100.00trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita maxima OX... [more]
A0A6J1I1U14.3e-30100.00transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita maxima OX=3661... [more]
A0A6J1G7X44.3e-30100.00transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita moschata OX=36... [more]
A0A6J1G7K74.3e-30100.00trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita moschata ... [more]
A0A0A0LQF11.3e-2998.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1[more]
BLAST of Spg008575 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80500.15.0e-3190.14SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 9..71
e-value: 4.6E-17
score: 62.4
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2coord: 1..72
NoneNo IPR availableGENE3D3.30.450.70coord: 1..80
e-value: 9.8E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR12403:SF28BNAC06G40500D PROTEINcoord: 1..72
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008575.1Spg008575.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0030008 TRAPP complex