Spg008556 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATTATTAACAAAGGAATTGTGACTAACCCTTTATGCCTTTTGTGCAGGAATCACGTGGAATGGACTTCCCATCTCTTTTGGGATTGCAAGGTATCAAAAAATTTGTGGCTCAAATACATTCCTCTAACAAAAGATTTATTTGATCTCAACAGGGGATTTTGGAATGCAAAGGCATATTGGCTTTGGCTCATGGACAATCTGAGCGACAAAGAATTGGAAAAATCCGTAATAATTCTCTGGAGCTTATGGCAACATAGAAATGAAGTTCTCACTAATTCCTCCAACGCAGATCAGTTCAGAATTTCAAAGCAAATAGACAGAAATATTTTCGCGCAAGAAGAAATTGACCAATCTCACCGTTCGCGGCTAGGAAGGAAGTCTGAGCAAAGAGTGAAGAGCCAGACGAGTCATGTGCAGTGGCAGCCCCCGCCTGGAAATTGCTGGAAACTCAACGTCGACGCCTCTTGGAGCGAAGCCAGGGGCATTGGAGGGGTGGGGTGGATCCTTCGTGACTCCTCAGGATCTTCACTATGCATGGGTTACAAACTGATCAGCAAAAGCTGGTCTGTCAAAACGCTTGAAATGAAAGCAATTGAAGAAGGCCTCAAATGTGTTCCTTCTTTTCTCGAGCGATCCAGGGAGCAATCCATTGCCCCAATCTTGGTGGAATCTGACGCCATCGGAGTCGTTCGCATCCTTAACGGGGAAGAAGAGGACCTCTCGGAAATCTCTTTTTTGGCCGAGGAGATTCTTCGTCTTAAGGAGTCTTTAGGGGAGGTGTCGTTTCATTTTTGTCCGAGATCTTGCAACGAGGCCGCCCATCGTTTGGCGCGAATTGCAATCTCTGATCCTCCGGTTTCAGTTTCTTTTTCTGGTTTTGAGATCTCTTCAAATGCGGAAGAAGATCATGTTAGTTGGTTTGGCCCTCCCCCTTCGTGGGTTGTTGGGCTATTAGCAGATCTATGTATCACTTCTTTTATTCCTTTTTAATGATATTTCCTATTCAAAAAAAAAAAAGATCCCATATTGAAAAGATAAGTGGAGACCTCACAATTTATAAGATTCATGGGTCACTCTATCCATTTCCAATTGGTTTTGAGATGGAACCCCATATTATCTATTATGGTATCAGAGCCATGAAACCCAAACGGTATTCGAGGCATGTTGAGGATCCCACATTGAAAAGATAAGTGAAGGCCTCACAATTAATAAGATTCATGGGTTACTCCACTCATTGCCAATTAGTTTTGAGATGGAACCCCATATTATATATCTAGGAACATTGTAATGGGTGGCTAAATTCTAATGGTTAATTAATTGCAGATATAACAACTTTTATTAAAAAATTGCTTTAATTTCTATCTGTGATAGATTTCTAACGTGATGGAAATCCAGTGAAGAAATTTATCACTAATAGAAATCAATAGTGTATTTGATTACGTGATAATTGTGTGTGTATATATATATATTTTGAGGTTCCCTCTTCTTTAAATTTCAACTTCCGCTTTGTGTTTTTCTTTTCTTCCAGTTCAATTTCCATGTTGTTTTGCTTCGACATCTATAAAAACAAAATCAGAGACATAGGTAAGGATGTTCACGGGGCGGGAGGGGAACGGGGAAGCCTTCCCCGTCCCCATCCCTGCCCCCTAAACCATTCCTCATCCCCGCAAAATTCCCCATTTAATTTTGCGGGGATCGGGGCGGGGATTCCCCGCGGGGAATTTGCGGGGATTGGGTTCCCCGTTGGGAATTATTCCCCATTTTTTTTAGTTTTTATTAAATTTCAATCAATTGCAATTTTTTTAAAAGATCTATGAAATATCCTAATAAAAAAAAACAATAATATTTCATGATAAAGTTTAAAATCTTCAAACATCATTTCTAAAAGTTTAAATTTCAATATTACAATCTGGTTTTCAACTTAAATATTACACAATTACAACATAGTCTCAAATATAAAAAATCTTAAAATAATAACAACAATAAAATAACAAGTCTAAAATTAAAAATTACAACAACAACAAAGCTAGGAATTTACTACTTATACTTACAAATTACATCATAATATTATAATAATATAAATTAAAGTGTATTATATTATATATATATTATTATTATAAAAAGAGCGGGGCGGGGGGGGGGGGGTCGGGGATGGGGACGGGGAATATAATCCCCGTCCCCGCCCCCGTTTAGAGAATGGGGAAAATTTTCTGCCCACTCCCTCCCCCATTCCCCATCCCGTTCGGGGTGGGGTCCCCACGGGCCCCGGCCCCACGGGGTAAATGGACACCCCTAGACATAAGTTTTAGAAGAAAAAAAAATGATAGTTTTCTATCACTGATAGAAATCTATTAGTGATACGTTTCTATCATTGATAGAAGCCTATCACTTATAGATTTATATCAGTGATAGCTGAAAGAAATCTAACATTGATAGTTCTATTTCTATCACTGATAGAAAACAATAGCAACTTCCAAACAAAATGTAGAAATCTTCTATCGATTCTATTAGTGATAGAAATATAGAAATTTGTCAGTGATAGGTTTCTATCACTGATAGAAATCTACCTTTCTATTACTGATAGGAATCTATTAGTGATGGATTCTATCACTATAGAAACCTATTGTGATACTTTGATATTTTTCAAATAATATTTTTATGTTTTTTTTTTGTTTTTTCAGGTTGATCTTATTAGAATGTACAGTACAAAGTATTGACGGATATAACTGTTGGGTTTTATGTCCTAAAACTCGTGGATGGTAAATGTAACAAAGTTAATCAATAAAGCGTTATTAAGTTTATTCAATAAGTAGTTATTGAATGGTTGTTTAATTCTACATTAATTAACCCAAATCCAAGAAACTAGAACCCATGGCTATATAATGAACACTTGAACTTTATGTGTAGACATAAAAGCGGATCAAGTTCAAGTGATAGCCAAAACGGTCTATAGTATAGGGATAGAGGTTGGGTGTCTTATCCTGGGGACACTATGTGATGCGACCCGCTTTGTATTTATTACAAACGATGTGATCCTGAATCGTTCATGTAACGACATGTGAGTGGGGGCGTCCTATGCAAAGAGTTTGCATAAGACCAGGACCGAGAAATAAGTCACTTTCACTTTATAACACCGTTTACTGTGAAACTGATTATTTCATGCGATGACCTAGGTAACTCGATCTTAATCTTGAGCTAACTATGAACTCCTGTTTATTCAGGATTATCCTTTGATTTGCATGGGTGAGAGTGACCCAACATCGCCGACTCAATAA ATGAACATTATTAACAAAGGAATTGTGACTAACCCTTTATGCCTTTTGTGCAGGAATCACGTGGAATGGACTTCCCATCTCTTTTGGGATTGCAAGGTATCAAAAAATTTGTGGCTCAAATACATTCCTCTAACAAAAGATTTATTTGATCTCAACAGGGGATTTTGGAATGCAAAGGCATATTGGCTTTGGCTCATGGACAATCTGAGCGACAAAGAATTGGAAAAATCCGTAATAATTCTCTGGAGCTTATGGCAACATAGAAATGAAGTTCTCACTAATTCCTCCAACGCAGATCAGTTCAGAATTTCAAAGCAAATAGACAGAAATATTTTCGCGCAAGAAGAAATTGACCAATCTCACCGTTCGCGGCTAGGAAGGAAGTCTGAGCAAAGAGTGAAGAGCCAGACGAGTCATGTGCAGTGGCAGCCCCCGCCTGGAAATTGCTGGAAACTCAACGTCGACGCCTCTTGGAGCGAAGCCAGGGGCATTGGAGGGGTGGGGTGGATCCTTCGTGACTCCTCAGGATCTTCACTATGCATGGGTTACAAACTGATCAGCAAAAGCTGGTCTGTCAAAACGCTTGAAATGAAAGCAATTGAAGAAGGCCTCAAATGTGTTCCTTCTTTTCTCGAGCGATCCAGGGAGCAATCCATTGCCCCAATCTTGGTGGAATCTGACGCCATCGGAGTCGTTCGCATCCTTAACGGGGAAGAAGAGGACCTCTCGGAAATCTCTTTTTTGGCCGAGGAGATTCTTCGTCTTAAGGAGTCTTTAGGGGAGGTGTCGTTTCATTTTTGTCCGAGATCTTGCAACGAGGCCGCCCATCGTTTGGCGCGAATTGCAATCTCTGATCCTCCGGTTTCAGTTTCTTTTTCTGGTTTTGAGATCTCTTCAAATGCGGAAGAAGATCATGATTATCCTTTGATTTGCATGGGTGAGAGTGACCCAACATCGCCGACTCAATAA ATGAACATTATTAACAAAGGAATTGTGACTAACCCTTTATGCCTTTTGTGCAGGAATCACGTGGAATGGACTTCCCATCTCTTTTGGGATTGCAAGGTATCAAAAAATTTGTGGCTCAAATACATTCCTCTAACAAAAGATTTATTTGATCTCAACAGGGGATTTTGGAATGCAAAGGCATATTGGCTTTGGCTCATGGACAATCTGAGCGACAAAGAATTGGAAAAATCCGTAATAATTCTCTGGAGCTTATGGCAACATAGAAATGAAGTTCTCACTAATTCCTCCAACGCAGATCAGTTCAGAATTTCAAAGCAAATAGACAGAAATATTTTCGCGCAAGAAGAAATTGACCAATCTCACCGTTCGCGGCTAGGAAGGAAGTCTGAGCAAAGAGTGAAGAGCCAGACGAGTCATGTGCAGTGGCAGCCCCCGCCTGGAAATTGCTGGAAACTCAACGTCGACGCCTCTTGGAGCGAAGCCAGGGGCATTGGAGGGGTGGGGTGGATCCTTCGTGACTCCTCAGGATCTTCACTATGCATGGGTTACAAACTGATCAGCAAAAGCTGGTCTGTCAAAACGCTTGAAATGAAAGCAATTGAAGAAGGCCTCAAATGTGTTCCTTCTTTTCTCGAGCGATCCAGGGAGCAATCCATTGCCCCAATCTTGGTGGAATCTGACGCCATCGGAGTCGTTCGCATCCTTAACGGGGAAGAAGAGGACCTCTCGGAAATCTCTTTTTTGGCCGAGGAGATTCTTCGTCTTAAGGAGTCTTTAGGGGAGGTGTCGTTTCATTTTTGTCCGAGATCTTGCAACGAGGCCGCCCATCGTTTGGCGCGAATTGCAATCTCTGATCCTCCGGTTTCAGTTTCTTTTTCTGGTTTTGAGATCTCTTCAAATGCGGAAGAAGATCATGATTATCCTTTGATTTGCATGGGTGAGAGTGACCCAACATCGCCGACTCAATAA MNIINKGIVTNPLCLLCRNHVEWTSHLFWDCKVSKNLWLKYIPLTKDLFDLNRGFWNAKAYWLWLMDNLSDKELEKSVIILWSLWQHRNEVLTNSSNADQFRISKQIDRNIFAQEEIDQSHRSRLGRKSEQRVKSQTSHVQWQPPPGNCWKLNVDASWSEARGIGGVGWILRDSSGSSLCMGYKLISKSWSVKTLEMKAIEEGLKCVPSFLERSREQSIAPILVESDAIGVVRILNGEEEDLSEISFLAEEILRLKESLGEVSFHFCPRSCNEAAHRLARIAISDPPVSVSFSGFEISSNAEEDHDYPLICMGESDPTSPTQ Homology
BLAST of Spg008556 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]) HSP 1 Score: 142.1 bits (357), Expect = 8.2e-30 Identity = 74/223 (33.18%), Postives = 117/223 (52.47%), Query Frame = 0
BLAST of Spg008556 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia]) HSP 1 Score: 124.4 bits (311), Expect = 1.8e-24 Identity = 72/201 (35.82%), Postives = 106/201 (52.74%), Query Frame = 0
BLAST of Spg008556 vs. NCBI nr
Match: XP_015385738.1 (uncharacterized protein LOC107177034 [Citrus sinensis]) HSP 1 Score: 120.2 bits (300), Expect = 3.4e-23 Identity = 80/283 (28.27%), Postives = 135/283 (47.70%), Query Frame = 0
BLAST of Spg008556 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 117.1 bits (292), Expect = 2.8e-22 Identity = 78/289 (26.99%), Postives = 140/289 (48.44%), Query Frame = 0
BLAST of Spg008556 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 116.7 bits (291), Expect = 3.7e-22 Identity = 70/218 (32.11%), Postives = 117/218 (53.67%), Query Frame = 0
BLAST of Spg008556 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.0e-30 Identity = 74/223 (33.18%), Postives = 117/223 (52.47%), Query Frame = 0
BLAST of Spg008556 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.6e-25 Identity = 72/201 (35.82%), Postives = 106/201 (52.74%), Query Frame = 0
BLAST of Spg008556 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22 Identity = 70/218 (32.11%), Postives = 117/218 (53.67%), Query Frame = 0
BLAST of Spg008556 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.7e-20 Identity = 61/185 (32.97%), Postives = 95/185 (51.35%), Query Frame = 0
BLAST of Spg008556 vs. ExPASy TrEMBL
Match: A0A5B7BI33 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037968 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.9e-20 Identity = 74/281 (26.33%), Postives = 124/281 (44.13%), Query Frame = 0
BLAST of Spg008556 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 2.2e-20 Identity = 79/279 (28.32%), Postives = 130/279 (46.59%), Query Frame = 0
BLAST of Spg008556 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 3.0e-06 Identity = 44/206 (21.36%), Postives = 91/206 (44.17%), Query Frame = 0
BLAST of Spg008556 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 48.9 bits (115), Expect = 8.8e-06 Identity = 31/111 (27.93%), Postives = 49/111 (44.14%), Query Frame = 0
BLAST of Spg008556 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 4.4e-05 Identity = 45/172 (26.16%), Postives = 73/172 (42.44%), Query Frame = 0
BLAST of Spg008556 vs. TAIR 10
Match: AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04 Identity = 27/103 (26.21%), Postives = 49/103 (47.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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