Spg008492 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008492
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mediator of RNA polymerase II transcription subunit 23 isoform X1
Location	scaffold10: 37588733 .. 37600724 (+)
RNA-Seq Expression	Spg008492
Synteny	Spg008492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGCCACACCGATAAAGCAAACCAATAATATTTGGAGCTCGGGGGTAGAGGCAGGGGAGAAGAGGCAGGCCTGTGAGACGGATAATAGTTCCGCAGGTGTTGGGATTCCAATATCAAAGGAAACAATAGCCATTTTGTGGGAAAATGGGCTTTGTATACGACTGATTCCTAAGAAGTGAGGGGGGAGAAAAGGTAACAATAATCAAACTAAATGTGCTAGAGAAATAAAGAGGCTGATTAGTTCATTGGAAAAACCTTTGGAAGAGAAGAGGCTTTCTTCTCAGGGCACTGAAGTTATTTTATGAAGATTCTCTCTTGGAACACTAGGGGTCTGGGGTATCATGGATCTCCCCTCTTTCTCTAGCCTCGTTCATTGTGTGGTGGGGGATGAGATATACACGTACTTTTGGGAGGATACGTGGGTGGGGGATAGACCCCTCTACTTGAAGTTCCCCCACCTACATGATCTTTCATCCATGAGAAATCGTTCGGTTGCTGATGTCTTGTTTCATTCAGGGAGCTCCCCTTCGCCTTTGTTTGGGTTCAATCGCGCTTTGTCCGATAGGGAAGCGATGGATGTTACGACTCTTCTTTCTTTGATTGAAGAGTTTGAGTTTAGGTTGGGGAGGAGAGATAATCGTTGTTGGAGCCCTAAGCCTTCCGAGGGGTTCTTGTGTAAATCTTTCTTTTGTTCGTTGTTGAATCCCTCTCCCCATAGTGATACTATATTCTCCATTTTGTGGAAGGTGAAAGTTTCGAAAAAGATAAGATTTTTTATTTGGCAAGTTCTCCATGGGAGAGTTAATACCTTCGCCTGACTCTTGAGAAGGAAGAATCCTTTGATTGGCTCGTTTTGTTGCAATCTTTGTCAGAAGGTAGAGGAAGACTTGGATCATTGATTTTGGAGATGTGATTTTTCTCGTTATGTGTGGGCTTGTTTCTTTTATTCGTTTGGTTTGTAGATGACGAGTTTGTTGGAGCTCAAGGAGATGTTTGAGGAGTCCCTCCTCCATCCAATGTTCCGTGATAGAGAAAGATTTTTACGGTAAGCGGGGATGTGTGCGTTAATTTGGAATTTGTAGGGGGAGAGGAATAATAGAGTGTTTAGGGGGATTGATAGGAGCCTGAGTGATATTTGGTCCCTTTCCAGGTTCCATGTATCCCTTTGGGCCTTAGTTACGAAATTATTTTGTAATTACCCGTTAGGTTTTGTCTTGCTTGATTGGGGTCCATTTCTCTAGAGAAAGTCTCTTTTGGTGGGCTGTTTTTTTTATGCCCCTGTAATTCTTTCATTTTTTTCTTAATGAAAGTTGGTTTTTCATTAAAAAAAGAAGTTGGGAGGTTGGATAAGGTAGGTTGTATGAGAGTAAGCCTTCCCCCATTTGAAGTGTATGATGAATCCCTTGTTTTTTGATCTTTTCAATGATAGGTCCCCTAAAGGAAAAGGATTTTGGGGAGCCGTTTAGAGGGAGACCCAATACGTGTTCGACCATTTGCCCATTTTACAACCATACTTTCTTGCGTAGTCTTCAATAGCCAAAGAGTCAACATTTATGTCAATGATCTTTGATTTGTGGAGGTTAACATTATGCCCAGAGGACTTTCAAAAAAATTGACTACCTTTAGAAGGTTTGTGATGGAGGAATCATCAAGCAATTCGGTGAACGAGGATGGTATCATCGGCAAATTAGAGATGATTTGTGCAAATATCCTCGTTTCCAACATAAAATCCTTTAACAAGCCCATATGTTTTCGCTTTAGAAAGAAGTTTGCTACAATCCATAATTATGATGAAGAGAAAGGGCAATAATGGATCACCTTATGGAGACCTCATGAAGCAAGTATTTTTCCCCTTGGGCGACCATTTATAATAATAGAGAAGTTTGTTGAGGAAGTGCACCCTTTTATCCAAGATCTCCATTTTTCATTGAGAAAAAATGAAAGAATACACGGGCATACAAAAAACAATATTTTCATAAAAAAAATCCAAGATCTCCATTTTTTGTCTAAAGCCTTTAACTTGGAGGATGTTATCAAGGAAATCCCAATCAACCTTATCAAAGGTCCTCTCAATGTCCAATTTGATGACAACCCCTTTGCATTTCTTCATTTTCCATTTGTCGATAAGCTCATTTTCCATGAGGGAAGCATCGAGAATTTGTCTTTCCTCTACAAAGGTTGTTTGATAATCAATTATCATAGATGGGAGGACCCTTTTTAGACGTTTGGGAAGGACCCGAGCAATGATTTTATAAAGGCTGGTGGTGAGGCTAATGGGGTGAAAATTAGCAACTGATCAGGCATTCACCTTCTTTGGAATCAAACAAATGTAAGTTTCGTTAAGGCTCACTTTAAATCCCATTCTTAAAAAAATGAACACTCATAATATCAACTTCGAGGATATTTCAACATTTTTTTGAAGATTTTTGTGGTGAAGCCGTCTGGTCCAGGGTTGTTTCATTTCCCAAACGCTGAATATCTTTCCAAACCTCTTCCTGGGTGAAGACTATCTCTAAAGTCGAAGCTTGCTGGTCATCAATTGGGCTCCAATTGAGGTTAGAAGGTAAGGCTTCAAAAATATTCTTTTTGGTATAAAGGATTTTGTAGAAAGACAAACTCAGCCACTGTCTCATCCTTTCTCAGTAAGCTTCTGCCTTGTGTAGAAAGAATCCGTAGTAGAAAGATTTGTTTTTTTGTTAAAAAAGAAAAAAAGATCCAATTTTCGTTGACAAGATAGGACAAATTAGATAACTCCGGAATATAGTGGGCTTTATGCTCTTCAATAGATAGACCATTGAACGTTGTAAGCCCTTTTGAAGGGTGAGGGAGTATGCACCTTCGGTAATGTTTGCTATGGAGAAAGAAGAATCGTTCCATAGAATAATAATGCCTGCCGAGGTACCCAGAGCATCCAAAGAAGTCCAGCCAATATTCCTTGCACTCTAAATAGATTTGATGAATCTTCTATCAATGTTGCAGCATTTTGTTTCTGGGAGAATAACAATTGAAGCGTTGTAGTCATGAGGATGATGCCTTTTATTTATTTTATTTTATTCTTCAATGATGTTATTTTCTTGAATTGAGTTGTGATAGATGATCTTATTAGGTGGATTTTGAATATGGTTTTTTCCGTTGTTAAATCACCAATCAACTCAAAAGCTTAAACTAATGGGTTATGATAAATTTAATTATATCAACACTTTAACACTCCCTCTCACTTGTGGGCTTAAAAATTTGTAGAAGGCCTAACAAGTGGAAATCAATATTAATTGGGGAGGAAATGACATTATAGGGTTTTGAACTCGGGACCTCCCGTTTGATACCATGTTAAATCACCAATCAACCCAAAAGTTTAAGCTGATGGGTTATGGTAAATTTAATTATATCAACACTTTAACATCAACACTCACCAAAGTTTTTGAAAGTTCATTTCTCAAGATTTGTCTTGCCATTATTGTTCTATTAAATTCCTATCCGTTATTGTTGTATTAAATTGTCTATGAGAATGAGAGCCAATTCTTTTATGGGAGGATCATTAGATTGGCACAAGGTGTTCCAATAAGTTGTGTGACTGCTCAAATTGAAAATTTAAGGGTATGATGGTAATGACTCTTACACTTCAGGAGTGATCTTTTTTGTAATTTTTCCTAAGTTATTCGACTGATTAGAGATATCAAAACTGGGAGTTGTTAAGTTGCAGATGTAGCAAAGTTATTGCGTGACTCTGGACATTTGACTGTTACATTCATAAATTCTTTCTAATAACCTAATTTCTGGGATAATGAAATGATATCTTTTTTCTGATAATCAATTATTGAAGTATATACATACAAATAAGATGCTAAATTGATTAGAAGAAAGAAAAAAAAATGTTGTTTTGACAATTTTTCTGGATCATTTCTTTTTGTGGAACTTCTATAATCTTAATTTTCATTTTGTGTCTTCAGGAACAAGGCCCAAAAGCGTGTTCAAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAGTTCCTTTTAGACTTTGAGCAAATTCAGAATCAGTTTGCAGTGAGTTGCAGAATCTAATTCAGAATTTAATATCATGATGGATTTTGACTTTTTTATTTTATTCTATTTTACTCAACAATGTTTGAACACTGTGTTTAACAATTGGGCCAATCTTTCAGGACCATGATCAGTTGCGTGCTGTGACCGAGTCAGTTCTTATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTATTCTCTTTGCTCTACGGAGTTTGTGCAGTATAGGTTACATCAATTGGGACACTTTTTTACCCTCCCTTCTTTCTTCAGTCTCATCTGCAGAAGTTTCCGTGGGTCAGGGAAGTCAAGCTGCTCCTACTGTCTCATCAACAAATTTATCGCAGTCTGGAGTGCTTCCATCCTCAAACCCAGTCCCTAATAATTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATCAGTTCATGGAATCAGTTCACCAGCTCAATCTAGTATGGATCCATCTTCTTGTACAACATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCGTCTGCAGTTAGGGTCAATTCATTTTTGAGGAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAGTTTAATTTGAAACCAGCGACGCATGCTGATATTTTTTCCCATATGCTTAATTGGATGGTTAATTGGGACCAACGGCAACAAGGGATTGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAGTGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAGTAAATGTCGGGTGCCTTTCTATGAATTACTACGTAGTGGCTTGCAATTCATAGATAACATTCCTGATGATGAATACTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTAGATCAACACCTTCACAGCCCTACATTTGGGACCCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAACAGTAGCAAGCTTGCGCTATTCACCAATAACATATCCAAGTGTACTGGGTGAACCTTTGCATGGAGAGGTGAAGAACTTATCTAGAGCTTAAAGAGGGTTTCTATTTGATGTCAGAGTTGATGAGTAAAAAAGAGGAAAACCGAAAATGTATCTTGTCTAGCTATTTGAGAGACTTAGAAATAAAAGAAAATGAAAGGAAAACATGTCACCATTTCCCTCCAGGCCAACTGACAATCTCTTCCTTCTGTAGGTGAGGTTAAATTTAGACACAATGTTAGGTGTAAGACTGTAAGTTATAAGTTGCAAAGATATTGCAATTATTTATATGTGATAGAGTCTGCTACTGTTTAGCTTCATTATGGAAAGGGACCAATGAGGGACGTATGAAGTCTTTTTTTTAATGATCTGCTTAGTTAAACATTCATCAATTGTGATTTCAGATCTTTATGATCTGTTAAATACTCAGTAATACCTCTCGTCCCCCGTATCCTTGTGTACCTTTATATAATGCCATATGAGTACCTTTCTAATTCTATCAATTTGGTTGAGTTTTAACTTTGCATGTTATGTGATTTCAATTATAGAAATCCAACTTGAACTCTACTAAGTTTTTCTCCCCTCAAATATTCTGTATGCTTTCATCTCTAAATAGTTGTTGCAGTTTTCATACAGTAACTGATACCATGCCCTTATCTAATTTGTTCATTTGATTGACATTGTGTAAACCTGGTTAAATTGGTCTTGTTTATTTGGTTTAGGAAATTGCATCTGGTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACTCCATCCCCTGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTTGCTATAGGTCTCCTGCACAAGGACCCACTCCTGGTGCTGTTTTTACATCTGAGATGATATGTGAAGCGACAATTGATAGAATCTTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAGTTTCTTTGTTATTCTTCTTTTTATCCTGCCATTTAGTCATGATATTCTTTATGAAAGTTGGCTTCTTATAAAGAAAAAGAAAGGAGTTAAACATTTTTATTCTTTTGCTGAGGAACAGGTAATAGTATCCTTTTGTCTACATATGCTTCTGTTGATGTGTGCATTGCCCATTTCATTAGTTCTGTAAGTCCCAGTACCTAATAATGAGAGCAAAAATGCTTTATGAAATATGTCCTAGTATCAGGACATCTGAACGTGAGCACTAGTTTTGTATAAGTTACTATCTATTAGCATCATTGAAGCTTCAGAGACTTGGACTATGGTGCAACCTCATGAATATTTTTCATTGATTTTTGAGTACAAATCAAATCTATATACTCCCTATAGGAATTTCCTTATTTTTAAAAATAAGAAACAAAACTACTTCATTCCAAAAAACCAACTATACAACCTAATGGGAGAGGGACAAGAAAGTCCATCCCCAAAATGAAAGGATTCAACCTTTCAATTTAAGTTGGTGAAAACAACCTTTCAATTTAAGTTGATGGTGAAAGTGTAGTTACGAAAAATACTGTGATGGCTACTCCAATTAGAGACTGTGAATTGTACAAAATCACAAAAGTACTTGAAAGAATTAAGCTTATCTGAGAATATTCTAGCATTTCTCCCCTTATAGAGAAGCCACAAAATAGCCTTTTGAAACATTGCTCCAAAGCACCTTCGCTTTGTCTTTCAAGCCACCTCCATTTATAGATTCCTTCATCTGAGCTTCTAGCGACCTAGGCATGCATCACCTTAAACCTACCAAACCCGAAATGCTCCTAGACCCTTCTGCTAAAAGGCACGGAAGGAAATGATGGTTCAGGGTCTCACCATCACTCTTGCACATTATACACATATTCGGTGATAAGGAAATGTAAGGATATCTCCTTTGAACTTTGTCATTTGTATTAAGCTACCCTTTTTGGCACGGAACCCTTCCAAATAGCGGGGCAACTACTTTTATCCAAATACCTTCTCTTCTCTTGTAGCTCTTGGTAAACAGGCTTAAGCATAAACTTCCCACCAGAATTTAGCCCCCATAGCAACTAATCCTCACTAAAATTTGGAATGCAGCCCTTCAACACCACACTAAGGTTTCCTCATTCGTTCACCTCCCTATCAAAACATCCCCTCTCAAATTTAAGTCCCAACCAAGGCCAGTGGGATTCCACAATGCATTTACATAACTTTTTTTAGCATTTAAGATTCTATAAATGGAAGGCCCCATAACAATTGATCCTCACTAAAATTTGGAATGCAGCCCTTCAACACCTCACTAAGGTTTCATCATTCGTTCAACTTTCTATCGAAACATCCCCTCTCAAATTTAAGTCCTAACTAAGGCTAGTGGGATTCCACAATGCATTTACATAACCTTTTTTAGCATTTAAGATTTTATAAATGGAAGGCCCCTCAAATGGATGATTTTGATCCATATATCTTCCCAAAAGAGAATTTTGGAGCCATCCCTAAGCTTGTAATTAACACTTCTCTAGAAAAAAATCTTTAGCTTTGACTATCTTCTTCCACGGACTGAAGGGGCCTTTCCAAGTAGATTTCAAGTCCAGCTCTTTTTAATAACCAAACTAAGGATAGGAAATTGTTTTTCATGAAAAAATTCCTTTCCAGAAGAGAGGGTAAAAAGTTGACCTTTCTTGATGTTATTTGTTACCGTTTGTTTCCAAGGGTTGATTGGCAAGAGGACAATTTTCTTCCCCATCCATGAGAACTCATAAGTATTATCCCTTCCTTTATGGATGGCTGGAACATCATACTGCCAAGGCCGTCTTAAAAGAATGTGGCATGCATCCATGTCTAAAACATCGCAAATGATTTGATCTTTGTAGCTTGCACCAATGGATAAAGGTATGGTACTTGTGTGTGTCACCTGGGCTTCACCTCCCTTCTTTATCCAAGTTACCTTGTAAGGAGCCGGATGTGGATTCAATGGGAGATTTAATGTAGAAACCAATTTGCTTGCCACCACATTTTCTGTGCTCCCACTGTCAATGATAACATTGCAGATTTTTCCATTTATTGTACATCTCGTCTTGAATAAAGCATGCCGCTGATAGCTGGGGTCAGTTTTAGGGGCCAAAAGAAGTCTTTGAATCACCAAAGACAAAGGTTCTCCTTCATCCGGTTCAAGGAAGTCAGTTTGTTCTTCAAGATCTGTGTCATCGCTTTCTTCTTGGTAATCCACATTATTGGCAATGGCTAGAGTCTTTCTTTGTGGACATTCATTGGACAAATGTCCTGTTTGATTGCAACGGAAACATTTACCCAACGTTGGCCGCGAGTAGGTGTTTGCATTTCGCTTAGGTACTGAATCTTTGGCTGTTCCCATATCCACCTGCTTCCCTTTGACTGCTGCAGTTGGAATCTGTGAGGTATTTTTCTCGGTAATAGGATTTCTTGAAATGGAGTTGTTTTGTTCTCCCACATTTCGCTTTGAATATTGCCTTTTGAACCTGTTAGCTATCTGTTCTTCCACCATGGCAGCTGTTGTAATGACTTCATTCAAATAGGCGATTGGTTGTAAGGCAATGCGTTCTTGAATATCCGTGCGTAAACCTCCTTTGTATCGAGCCACCAAGTATTGTTGATTTTCACCAAGGTTTGTCCTAGCCCCCAATCTATGGAATTCTTCAGTATATTCCATAACCGTGCGAGTTCCTTGGCGACAATTTTGATATTGATTATACAAGATTTGTTCAAAATTGGCCGGAAGGAATCTTTCTTTCATCATCTTTTTCATTCTTTCCCACCTTCGAATTGGTCTTTTCCCAAATCTTTGACGATTTAATTCGAGTTGATCCCACCAAGCTTGAACCCCTCCTTTTAATTTTAGAGCCACCAACTTGACTTTCTTGGTTTCCGGTGTGTTCATGTAACTAAAAATTTTTTCTACATGCCGTACCCATTCCAAGAAAGCCTCAATTTCCATCTTTCCATTATATGTTGGAATGTTGATTTTCATCTTGAAATCGTTCTCTTGTTGGTGATAGGGAAATCTTTGGCCTCTTTGTCTTTCCATTTGAAAGTCCAATGGATCTTCATCATCTTCACTCGAGGAATCTGTCAATTCTTGTTGCCTTTTATATAAAGGATTATCATTGAAATCTTGATACCTTCTTGGAGCTATATCCCCTTCTTGGACTGTTCTTTGTTCGCAAATTTGTTTTTCTTGCTGATATTTTTCTTTACTGCTTTCTCCTTGGCGATCTTGCTGACCTCTTCCCCAATTTGTTTGTGCTGCTGTATTTGAAACATGCTGCTCGGTTTTGCTGCCCATTTTCTCACACATCATCTCCAAAATTTTCTTGATCTCACCCACATCATTTTTCAAGACTTGTATGTCTTGTTCAACTGACAGCAAGCGTACGGTTGTTGATCGTGGTGAGAGGACGGTGGTAGGCTCCGCCTCTTTTCCAACCAAAGAAGAATCTCCCATGGTGTTGGTCGACACTTTCTTGGTTGCCATAAAGATTGTGCCCAAAGTCTTGATGCTCTGATACCAATCTTGATGTAGCTCTAGGTATGAATAAAATCAGAAGTATATTATGATTTAAACTTGAAGGCAACCAACCTTTAAATAGGCTTACAAGGGGGTGGCTAAGCTAACAGAATAACAGAATAAAAGAGGCACATGCCATACACATGGCTGAAGGCCAATTAAACTAACAAACAATCCAAAAGCTAATAACCGGCTACATCAGTAGGAATATGAGAAAGAGACAAAGTAGGTGAGGGCAAGCTAGATAATACGGTTGGAATGGTGTGAGTACTGAGTTGGCAGATAAGTAGAAATTTCTTCACTTGACCAATTTCCTTAAGATTCTTTCGCAGGTAGGATTCCTCAATTCTACCCTTTTAGGATCACTCCCGGGGAATATGCTGCAATCGATCGTTATTCGTTAATTTTCTAATTTCCATGCTAATTTATTTTTGCACTGATATTTGTCTGCATCCTGAATTTCTGTTTATCTGTAATCTGTATTTTCTATTTGTAGCTAGAGATTTATATTTAACTCTTTCTATAGTTTCAATAGTGGATGACTGGATGTATTATCCTTTAATATATGTCAGATTGAAAGTAAACATTTTAAATGAAACGAATCTTAGAGTAATAGCATTATTATGGTTGTTTTGTTTCGTAGTTACTGACATTAGAAATCTTTGAATTTTTATTAACATGTTGATAACCAACTTCTTGTAACTATTGTTTGCAGAGATACATTGCTGGCAAGAGTGGCTTGTCTTCTCAGATATATTCTTTTTTCTTATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTACTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTAACTTGGCTGTTTGCACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTTGATTATTCATTGCTCTTGATATTACCCATGCACTCTTGCATTTTCTCTTAATTGCTTCTATTTAAGATGCACTAACTGAAGAGTGAACGTAATTGACCCTCTTCTAAATATTTTGAGAAGTTTTACGTAGTATAACTAGATGTTGCAGCTGAAAATTTTGGCTTTGTAAAATTATGTTAGTATTTGTTAATCCACAGGCATATTGTTAATCTGCATTAGCCATGTTGCGGAATCTAAATCTGATTTCCTCAAAATTGGAAAAGTTAATTTTTCATGTTAAATGTGTTTCATGAAAACGTCAATCATGTTTGGAAATTTGATTAATCCATATGTAATACAGTTGTGGAGAATTCTTTCATCTATGTACTTATGTTTCATATATGTATTCAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGGTGATCCGAATAATCCTCAAAGCATCCTTCTTGAATTTATTAGTAGTTGTCAAAACTTGCGTATTTGGTCACTGAACACAACAACCAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCCAGTAAAGGTACATATTGCATAGTACATGTAGAGTTGCGGAGTCATGCTACACATCATAGTTGTTCTTTCTTTGTTTGAGATCACACATCATAGCATTTTAAATTTCTTTTTTAGGAAGAAAAATTAGAACAGCTCTTATTTACGTGCCATCTGTCACGGTCATGCTTGTCCAAGGCGTGTTGCCCATGGCCGCATGCCCATGTCAACCCTTCCCCCTCATGCTTTCATTATATGTATTTCCTTTGTATCGCTTGTTTACTTTCCTTTGCATTTCTCAAGTGTATGACTCCTCGTGATTTTCATGTGTAAGCCTGCCAAGGCTAAAATGCTTAATAATATACTATAGGGGGGTACGACTAGTTGTCAAACCTTCCTACCCGAGAGTTGTATGCTATCAAGCTGTTGTTGTGTCTTTGCTTACTTGATAGTCTGTGCAACAAATACTCTTTCAAAATGTCTTCAAACGTTTTCCAAAACCTTTTCTCTAACCCCGTTTTCTAAAACCGTTTTCCAAGAACGGGGGTAGAGGTTGCGATATTCGCCCGTTGTGCCACCGGCGATCCGTTTTCAAGTTGGCTGACTTACTTGTGAGCGAAAGTAAGTGCCGCACAGTCGCTTTACGAGACCCTAAAGACCGCGACTGTGACAGTTGGTATCAGAGCCCAGTTGGCTCCTGAGATAGAAGTCCGAAATCATGTCGGCAGTAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAATCTCGTCTTGA

mRNA sequence

ATGTTGGAAGCCACACCGATAAAGCAAACCAATAATATTTGGAGCTCGGGGGTAGAGGCAGGGGAGAAGAGGCAGGCCTGTGAGACGGATAATAGTTCCGCAGGGAGCTCCCCTTCGCCTTTGTTTGGGTTCAATCGCGCTTTGTCCGATAGGGAAGCGATGGATGTTACGACTCTTCTTTCTTTGATTGAAGAGTTTGAGTTTAGGTTGGGGAGGAGAGATAATCGTTGTTGGAGCCCTAAGCCTTCCGAGGGGTTCTTGTGTAAATCTTTCTTTTGTTCGTTGTTGAATCCCTCTCCCCATAGTGATACTATATTCTCCATTTTGTGGAAGATGACGAGTTTGTTGGAGCTCAAGGAGATGTTTGAGGAGTCCCTCCTCCATCCAATGTTCCGTGATAGAGAAAGATTTTTACGGAACAAGGCCCAAAAGCGTGTTCAAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAGTTCCTTTTAGACTTTGAGCAAATTCAGAATCAGTTTGCAGACCATGATCAGTTGCGTGCTGTGACCGAGTCAGTTCTTATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTATTCTCTTTGCTCTACGGAGTTTGTGCAGTATAGGTTACATCAATTGGGACACTTTTTTACCCTCCCTTCTTTCTTCAGTCTCATCTGCAGAAGTTTCCGTGGGTCAGGGAAGTCAAGCTGCTCCTACTGTCTCATCAACAAATTTATCGCAGTCTGGAGTGCTTCCATCCTCAAACCCAGTCCCTAATAATTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATCAGTTCATGGAATCAGTTCACCAGCTCAATCTAGTATGGATCCATCTTCTTGTACAACATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCGTCTGCAGTTAGGGTCAATTCATTTTTGAGGAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAGTTTAATTTGAAACCAGCGACGCATGCTGATATTTTTTCCCATATGCTTAATTGGATGGTTAATTGGGACCAACGGCAACAAGGGATTGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAGTGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAGTAAATGTCGGGTGCCTTTCTATGAATTACTACGTAGTGGCTTGCAATTCATAGATAACATTCCTGATGATGAATACTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTAGATCAACACCTTCACAGCCCTACATTTGGGACCCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAACAGTAGCAAGCTTGCGCTATTCACCAATAACATATCCAAGTGTACTGGGTGAACCTTTGCATGGAGAGGAAATTGCATCTGGTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACTCCATCCCCTGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTTGCTATAGGTCTCCTGCACAAGGACCCACTCCTGGTGCTGTTTTTACATCTGAGATGATATGTGAAGCGACAATTGATAGAATCTTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAGTAATAGTATCCTTTTGTCTACATATGCTTCTGTTGATGTGTGCATTGCCCATTTCATTAGTTCTGTAAGTCCCAAGATACATTGCTGGCAAGAGTGGCTTGTCTTCTCAGATATATTCTTTTTTCTTATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTACTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTAACTTGGCTGTTTGCACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGGTGATCCGAATAATCCTCAAAGCATCCTTCTTGAATTTATTAGTAGTTGTCAAAACTTGCGTATTTGGTCACTGAACACAACAACCAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCCAGTAAAGTAAGTGCCGCACAGTCGCTTTACGAGACCCTAAAGACCGCGACTGTGACAGTTGGTATCAGAGCCCAGTTGGCTCCTGAGATAGAAGTCCGAAATCATGTCGGCAGTAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAATCTCGTCTTGA

Coding sequence (CDS)

ATGTTGGAAGCCACACCGATAAAGCAAACCAATAATATTTGGAGCTCGGGGGTAGAGGCAGGGGAGAAGAGGCAGGCCTGTGAGACGGATAATAGTTCCGCAGGGAGCTCCCCTTCGCCTTTGTTTGGGTTCAATCGCGCTTTGTCCGATAGGGAAGCGATGGATGTTACGACTCTTCTTTCTTTGATTGAAGAGTTTGAGTTTAGGTTGGGGAGGAGAGATAATCGTTGTTGGAGCCCTAAGCCTTCCGAGGGGTTCTTGTGTAAATCTTTCTTTTGTTCGTTGTTGAATCCCTCTCCCCATAGTGATACTATATTCTCCATTTTGTGGAAGATGACGAGTTTGTTGGAGCTCAAGGAGATGTTTGAGGAGTCCCTCCTCCATCCAATGTTCCGTGATAGAGAAAGATTTTTACGGAACAAGGCCCAAAAGCGTGTTCAAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAGTTCCTTTTAGACTTTGAGCAAATTCAGAATCAGTTTGCAGACCATGATCAGTTGCGTGCTGTGACCGAGTCAGTTCTTATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTATTCTCTTTGCTCTACGGAGTTTGTGCAGTATAGGTTACATCAATTGGGACACTTTTTTACCCTCCCTTCTTTCTTCAGTCTCATCTGCAGAAGTTTCCGTGGGTCAGGGAAGTCAAGCTGCTCCTACTGTCTCATCAACAAATTTATCGCAGTCTGGAGTGCTTCCATCCTCAAACCCAGTCCCTAATAATTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATCAGTTCATGGAATCAGTTCACCAGCTCAATCTAGTATGGATCCATCTTCTTGTACAACATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCGTCTGCAGTTAGGGTCAATTCATTTTTGAGGAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAGTTTAATTTGAAACCAGCGACGCATGCTGATATTTTTTCCCATATGCTTAATTGGATGGTTAATTGGGACCAACGGCAACAAGGGATTGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAGTGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAGTAAATGTCGGGTGCCTTTCTATGAATTACTACGTAGTGGCTTGCAATTCATAGATAACATTCCTGATGATGAATACTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTAGATCAACACCTTCACAGCCCTACATTTGGGACCCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAACAGTAGCAAGCTTGCGCTATTCACCAATAACATATCCAAGTGTACTGGGTGAACCTTTGCATGGAGAGGAAATTGCATCTGGTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACTCCATCCCCTGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTTGCTATAGGTCTCCTGCACAAGGACCCACTCCTGGTGCTGTTTTTACATCTGAGATGATATGTGAAGCGACAATTGATAGAATCTTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAGTAATAGTATCCTTTTGTCTACATATGCTTCTGTTGATGTGTGCATTGCCCATTTCATTAGTTCTGTAAGTCCCAAGATACATTGCTGGCAAGAGTGGCTTGTCTTCTCAGATATATTCTTTTTTCTTATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTACTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTAACTTGGCTGTTTGCACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGGTGATCCGAATAATCCTCAAAGCATCCTTCTTGAATTTATTAGTAGTTGTCAAAACTTGCGTATTTGGTCACTGAACACAACAACCAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCCAGTAAAGTAAGTGCCGCACAGTCGCTTTACGAGACCCTAAAGACCGCGACTGTGACAGTTGGTATCAGAGCCCAGTTGGCTCCTGAGATAGAAGTCCGAAATCATGTCGGCAGTAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAATCTCGTCTTGA

Protein sequence

MLEATPIKQTNNIWSSGVEAGEKRQACETDNSSAGSSPSPLFGFNRALSDREAMDVTTLLSLIEEFEFRLGRRDNRCWSPKPSEGFLCKSFFCSLLNPSPHSDTIFSILWKMTSLLELKEMFEESLLHPMFRDRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKVSAAQSLYETLKTATVTVGIRAQLAPEIEVRNHVGSKTVGQDPCGTIGRDRRADALPEGSPRFGSLPRISS

Homology

[Close]

BLAST of Spg008492 vs. NCBI nr
Match: XP_038875594.1 (mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida])

HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 556/616 (90.26%), Postives = 571/616 (92.69%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQ 252
           SGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAA TVS+TNLSQ
Sbjct: 106 SGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAASTVSTTNLSQ 165

Query: 253 SGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGL 312
           SGVLPSSNPVPN+STFQSSNPASP PSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGL
Sbjct: 166 SGVLPSSNPVPNSSTFQSSNPASPSPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGL 225

Query: 313 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGI 372
           PSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+
Sbjct: 226 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGM 285

Query: 373 EESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF 432
           EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Sbjct: 286 EESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALF 345

Query: 433 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSV 492
           TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSV
Sbjct: 346 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSV 405

Query: 493 LGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTP 552
           LGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRSPAQG +P
Sbjct: 406 LGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSPAQGLSP 465

Query: 553 GAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQ 612
           GAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQ
Sbjct: 466 GAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCWQ 525

Query: 613 EWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA 672
           EWLVFSDIFFFLMKSGCIDFADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA
Sbjct: 526 EWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA 585

Query: 673 LNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ 732
           LNSDARKVETTRKI+SFHREDKS DPNNPQSILL+FISSCQNLR+WSLNTTTREYLN+EQ
Sbjct: 586 LNSDARKVETTRKIISFHREDKSADPNNPQSILLDFISSCQNLRLWSLNTTTREYLNSEQ 633

Query: 733 LQKGKQIDEWWRQASK 749
           LQKGKQIDEWWR ASK
Sbjct: 646 LQKGKQIDEWWRLASK 633

[Close]

BLAST of Spg008492 vs. NCBI nr
Match: XP_016898808.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cucumis melo])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 552/610 (90.49%), Postives = 570/610 (93.44%), Query Frame = 0


Query: 139 RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPR 198
           RNKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPR
Sbjct: 7   RNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPR 66

Query: 199 AEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPS 258
           AEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAAPTVS+TNLSQSGVLPS
Sbjct: 67  AEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPS 126

Query: 259 SNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRV 318
           SNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRV
Sbjct: 127 SNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRV 186

Query: 319 NSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENM 378
           NSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENM
Sbjct: 187 NSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENM 246

Query: 379 KSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI 438
           KSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LFTLILEI
Sbjct: 247 KSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEI 306

Query: 439 HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLH 498
           HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLH
Sbjct: 307 HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLH 366

Query: 499 GEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTPGAVFTS 558
           GE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS AQG +PGAVFTS
Sbjct: 367 GEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTS 426

Query: 559 EMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFS 618
           EMICEATIDRIFELLKLTNS                            +IHCWQEWLVFS
Sbjct: 427 EMICEATIDRIFELLKLTNS----------------------------EIHCWQEWLVFS 486

Query: 619 DIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR 678
           DIFFFLMKSGCIDFADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDAR
Sbjct: 487 DIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDAR 546

Query: 679 KVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ 738
           KVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQLQKGKQ
Sbjct: 547 KVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQ 588

Query: 739 IDEWWRQASK 749
           IDEWWRQASK
Sbjct: 607 IDEWWRQASK 588

[Close]

BLAST of Spg008492 vs. NCBI nr
Match: XP_008467111.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo] >KAA0046342.1 mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 553/616 (89.77%), Postives = 571/616 (92.69%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQ 252
           SGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAAPTVS+TNLSQ
Sbjct: 106 SGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQ 165

Query: 253 SGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGL 312
           SGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGL
Sbjct: 166 SGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGL 225

Query: 313 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGI 372
           PSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+
Sbjct: 226 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGM 285

Query: 373 EESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF 432
           EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Sbjct: 286 EESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALF 345

Query: 433 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSV 492
           TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSV
Sbjct: 346 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSV 405

Query: 493 LGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTP 552
           LGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS AQG +P
Sbjct: 406 LGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSP 465

Query: 553 GAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQ 612
           GAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQ
Sbjct: 466 GAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCWQ 525

Query: 613 EWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA 672
           EWLVFSDIFFFLMKSGCIDFADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSA
Sbjct: 526 EWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSA 585

Query: 673 LNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ 732
           LNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Sbjct: 586 LNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQ 633

Query: 733 LQKGKQIDEWWRQASK 749
           LQKGKQIDEWWRQASK
Sbjct: 646 LQKGKQIDEWWRQASK 633

[Close]

BLAST of Spg008492 vs. NCBI nr
Match: XP_022973546.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 551/617 (89.30%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAP-TVSSTNLS 252
           SGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAEVS+GQGSQAAP TVS+TNLS
Sbjct: 106 SGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLS 165

Query: 253 QSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG 312
           QSGVLPSSNPVPN+STFQSSNPASPLPS+HGISSPAQSS+DP+SCT LSPIKSSDLSGTG
Sbjct: 166 QSGVLPSSNPVPNSSTFQSSNPASPLPSIHGISSPAQSSIDPTSCTALSPIKSSDLSGTG 225

Query: 313 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQG 372
           LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP T ADIFSHMLNWMVNWDQRQQG
Sbjct: 226 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQG 285

Query: 373 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL 432
           IEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Sbjct: 286 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEAL 345

Query: 433 FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPS 492
           FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPS
Sbjct: 346 FTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPS 405

Query: 493 VLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPT 552
           VLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAP YRSPAQG +
Sbjct: 406 VLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLS 465

Query: 553 PGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCW 612
           PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCW
Sbjct: 466 PGAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCW 525

Query: 613 QEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 672
           QEWLVFSDIF+FLMKSGCIDFADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMS
Sbjct: 526 QEWLVFSDIFYFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 585

Query: 673 ALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE 732
           ALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNTTTREYLNNE
Sbjct: 586 ALNSDARKVETTRKILSFHREDKSADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNNE 634

Query: 733 QLQKGKQIDEWWRQASK 749
           QLQKGKQIDEWWRQASK
Sbjct: 646 QLQKGKQIDEWWRQASK 634

[Close]

BLAST of Spg008492 vs. NCBI nr
Match: KAG7016782.1 (Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 551/617 (89.30%), Postives = 569/617 (92.22%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVVAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAP-TVSSTNLS 252
           SGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAEVS+GQGSQAAP TVS+TNLS
Sbjct: 106 SGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLS 165

Query: 253 QSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG 312
           QSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DP+SCT LSPIKSSDLSGTG
Sbjct: 166 QSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTG 225

Query: 313 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQG 372
           LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG
Sbjct: 226 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQG 285

Query: 373 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL 432
           IEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Sbjct: 286 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEAL 345

Query: 433 FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPS 492
           FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPS
Sbjct: 346 FTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPS 405

Query: 493 VLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPT 552
           VLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAP YRSPAQG +
Sbjct: 406 VLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLS 465

Query: 553 PGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCW 612
           PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCW
Sbjct: 466 PGAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCW 525

Query: 613 QEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 672
           QEWLVFSDIF+FLMKSGCIDFADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMS
Sbjct: 526 QEWLVFSDIFYFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 585

Query: 673 ALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE 732
           ALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNT TREYLNNE
Sbjct: 586 ALNSDARKVETTRKILSFHREDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNE 634

Query: 733 QLQKGKQIDEWWRQASK 749
           QLQKGKQIDEWWRQA K
Sbjct: 646 QLQKGKQIDEWWRQAIK 634

[Close]

BLAST of Spg008492 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 5.1e-220
Identity = 399/610 (65.41%), Postives = 465/610 (76.23%), Query Frame = 0


Query: 140 NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRA 199
           NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRA
Sbjct: 52  NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRA 111

Query: 200 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQ-AAPTVSSTNLSQSGVLPS 259
           EF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG Q AA T  S+  S   V+P 
Sbjct: 112 EFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP- 171

Query: 260 SNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSA 319
                      S NP S LPS HGI SP+ S +        S      ++  G     +A
Sbjct: 172 ----------VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENA 231

Query: 320 VRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEES 379
           +R +  +R  A++SLRQL CKIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S
Sbjct: 232 MRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDS 291

Query: 380 ENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI 439
              KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Sbjct: 292 VG-KSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLI 351

Query: 440 LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGE 499
           +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGE
Sbjct: 352 MEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGE 411

Query: 500 PLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQ-GPTPGA 559
           PL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAPCYR   Q GP PGA
Sbjct: 412 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGA 471

Query: 560 VFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEW 619
           VFTS+MICEA IDRI ELLKLTNSGN    I L         ++     +    +CWQEW
Sbjct: 472 VFTSDMICEAIIDRIVELLKLTNSGNDCFGIDL---------VSVTFPPLYADANCWQEW 531

Query: 620 LVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALN 679
           LVFSDIFFFL+KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALN
Sbjct: 532 LVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALN 591

Query: 680 SDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ 739
           SDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Sbjct: 592 SDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLL 633

Query: 740 KGKQIDEWWR 745
           KGKQIDEWWR
Sbjct: 652 KGKQIDEWWR 633

[Close]

BLAST of Spg008492 vs. ExPASy Swiss-Prot
Match: Q55BN0 (Putative mediator of RNA polymerase II transcription subunit 23 OS=Dictyostelium discoideum OX=44689 GN=med23 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.1e-04
Identity = 53/221 (23.98%), Postives = 91/221 (41.18%), Query Frame = 0


Query: 560 MICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSD 619
           +I EATI +  +LL       Y N I+ +   +                + W+EWL+FS+
Sbjct: 455 IITEATISKTMQLL-----NKYPNQIIENQIEN----------------NSWKEWLLFSE 514

Query: 620 IFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARK 679
            F+FL ++G +D   F+  L  +    G  + + N V  L ++ I ++ V +      + 
Sbjct: 515 QFYFLCENGLVDLEQFIVTLSEKRMNNGDPI-KDNMVVLLISKTIIIQDVKTLFKQHLQN 574

Query: 680 VETTR------KILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTT--------- 739
           V +         +LSF   D S  P   Q+I L F        +  +NT T         
Sbjct: 575 VNSNHYGHLIPLVLSFVNND-SNYPIISQNISLYFF-------LMRINTNTENPEIIAHI 634

Query: 740 REYLNNEQLQ--KGKQIDEWWRQASKVSAAQSLYETLKTAT 764
           ++ L+N   Q    +Q   WW ++ KV      + T++  T
Sbjct: 635 KKLLDNFNFQFTLFQQYRNWW-ESEKVKQKPEFFTTIQDIT 644

[Close]

BLAST of Spg008492 vs. ExPASy TrEMBL
Match: A0A1S4DS63 (mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 552/610 (90.49%), Postives = 570/610 (93.44%), Query Frame = 0


Query: 139 RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPR 198
           RNKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPR
Sbjct: 7   RNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPR 66

Query: 199 AEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPS 258
           AEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAAPTVS+TNLSQSGVLPS
Sbjct: 67  AEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPS 126

Query: 259 SNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRV 318
           SNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRV
Sbjct: 127 SNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRV 186

Query: 319 NSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENM 378
           NSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENM
Sbjct: 187 NSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENM 246

Query: 379 KSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI 438
           KSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LFTLILEI
Sbjct: 247 KSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEI 306

Query: 439 HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLH 498
           HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLH
Sbjct: 307 HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLH 366

Query: 499 GEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTPGAVFTS 558
           GE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS AQG +PGAVFTS
Sbjct: 367 GEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTS 426

Query: 559 EMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFS 618
           EMICEATIDRIFELLKLTNS                            +IHCWQEWLVFS
Sbjct: 427 EMICEATIDRIFELLKLTNS----------------------------EIHCWQEWLVFS 486

Query: 619 DIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR 678
           DIFFFLMKSGCIDFADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDAR
Sbjct: 487 DIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDAR 546

Query: 679 KVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ 738
           KVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQLQKGKQ
Sbjct: 547 KVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQ 588

Query: 739 IDEWWRQASK 749
           IDEWWRQASK
Sbjct: 607 IDEWWRQASK 588

[Close]

BLAST of Spg008492 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 553/616 (89.77%), Postives = 571/616 (92.69%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQ 252
           SGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAAPTVS+TNLSQ
Sbjct: 106 SGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQ 165

Query: 253 SGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGL 312
           SGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGL
Sbjct: 166 SGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGL 225

Query: 313 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGI 372
           PSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+
Sbjct: 226 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGM 285

Query: 373 EESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF 432
           EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Sbjct: 286 EESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALF 345

Query: 433 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSV 492
           TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSV
Sbjct: 346 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSV 405

Query: 493 LGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTP 552
           LGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS AQG +P
Sbjct: 406 LGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSP 465

Query: 553 GAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQ 612
           GAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQ
Sbjct: 466 GAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCWQ 525

Query: 613 EWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA 672
           EWLVFSDIFFFLMKSGCIDFADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSA
Sbjct: 526 EWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSA 585

Query: 673 LNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ 732
           LNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Sbjct: 586 LNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQ 633

Query: 733 LQKGKQIDEWWRQASK 749
           LQKGKQIDEWWRQASK
Sbjct: 646 LQKGKQIDEWWRQASK 633

[Close]

BLAST of Spg008492 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 553/616 (89.77%), Postives = 571/616 (92.69%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQ 252
           SGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAAPTVS+TNLSQ
Sbjct: 106 SGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQ 165

Query: 253 SGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGL 312
           SGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGL
Sbjct: 166 SGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGL 225

Query: 313 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGI 372
           PSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+
Sbjct: 226 PSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGM 285

Query: 373 EESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF 432
           EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Sbjct: 286 EESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALF 345

Query: 433 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSV 492
           TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSV
Sbjct: 346 TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSV 405

Query: 493 LGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTP 552
           LGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS AQG +P
Sbjct: 406 LGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSP 465

Query: 553 GAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQ 612
           GAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQ
Sbjct: 466 GAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCWQ 525

Query: 613 EWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSA 672
           EWLVFSDIFFFLMKSGCIDFADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSA
Sbjct: 526 EWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSA 585

Query: 673 LNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ 732
           LNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Sbjct: 586 LNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQ 633

Query: 733 LQKGKQIDEWWRQASK 749
           LQKGKQIDEWWRQASK
Sbjct: 646 LQKGKQIDEWWRQASK 633

[Close]

BLAST of Spg008492 vs. ExPASy TrEMBL
Match: A0A6J1I8Y2 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=3661 GN=LOC111472080 PE=3 SV=1)

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 551/617 (89.30%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 133 DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQC 192
           D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQC
Sbjct: 46  DSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQC 105

Query: 193 SGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAAP-TVSSTNLS 252
           SGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAEVS+GQGSQAAP TVS+TNLS
Sbjct: 106 SGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLS 165

Query: 253 QSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG 312
           QSGVLPSSNPVPN+STFQSSNPASPLPS+HGISSPAQSS+DP+SCT LSPIKSSDLSGTG
Sbjct: 166 QSGVLPSSNPVPNSSTFQSSNPASPLPSIHGISSPAQSSIDPTSCTALSPIKSSDLSGTG 225

Query: 313 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQG 372
           LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKF+LKP T ADIFSHMLNWMVNWDQRQQG
Sbjct: 226 LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQG 285

Query: 373 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL 432
           IEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Sbjct: 286 IEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEAL 345

Query: 433 FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPS 492
           FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPS
Sbjct: 346 FTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPS 405

Query: 493 VLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPT 552
           VLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAP YRSPAQG +
Sbjct: 406 VLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLS 465

Query: 553 PGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCW 612
           PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCW
Sbjct: 466 PGAVFTSEMICEATIDRIFELLKLTNS----------------------------EIHCW 525

Query: 613 QEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 672
           QEWLVFSDIF+FLMKSGCIDFADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMS
Sbjct: 526 QEWLVFSDIFYFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMS 585

Query: 673 ALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE 732
           ALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNTTTREYLNNE
Sbjct: 586 ALNSDARKVETTRKILSFHREDKSADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNNE 634

Query: 733 QLQKGKQIDEWWRQASK 749
           QLQKGKQIDEWWRQASK
Sbjct: 646 QLQKGKQIDEWWRQASK 634

[Close]

BLAST of Spg008492 vs. ExPASy TrEMBL
Match: A0A6J1CXU7 (mediator of RNA polymerase II transcription subunit 23 OS=Momordica charantia OX=3673 GN=LOC111015577 PE=3 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 545/635 (85.83%), Postives = 572/635 (90.08%), Query Frame = 0


Query: 114 SLLELKEMFEESLLHPMFRDRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFAD 173
           +++ L +++      P   D  R   NKAQKRV AINRELPPRNEQFLLDFEQ+QNQFAD
Sbjct: 27  AIVNLFDLYLGRSNRPKPEDSSREPPNKAQKRVLAINRELPPRNEQFLLDFEQVQNQFAD 86

Query: 174 HDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEV 233
           HDQLRAVTESVLISLVVQCSGHVPRAEF+LF+LRSLCSI YINWDTFLPSLLSSVSSAEV
Sbjct: 87  HDQLRAVTESVLISLVVQCSGHVPRAEFLLFSLRSLCSICYINWDTFLPSLLSSVSSAEV 146

Query: 234 SVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDP 293
           SVGQG+QA PTVSSTNLSQS VLP SNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DP
Sbjct: 147 SVGQGTQATPTVSSTNLSQSAVLPVSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDP 206

Query: 294 SSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHAD 353
           SSCT LSPIKSSDLSG GL SAVR+NSF RNNAISSLRQLCCKIILSGL+FNLKPATHAD
Sbjct: 207 SSCTALSPIKSSDLSGAGLQSAVRINSFFRNNAISSLRQLCCKIILSGLEFNLKPATHAD 266

Query: 354 IFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYE 413
           IFSHMLNWMVNWDQRQQGIEESE+M SWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYE
Sbjct: 267 IFSHMLNWMVNWDQRQQGIEESEHMNSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYE 326

Query: 414 LLRSGLQFIDNIPDDEYLFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQN 473
           LLRSGLQFIDNIPDDE LFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTM N
Sbjct: 327 LLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTQRIFSQTMHN 386

Query: 474 ISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWW 533
           ISGE VASLRYSPITYPSVLGEPLHGE++AS IQRGTRDWERAMRCIRHALRTTPSPDWW
Sbjct: 387 ISGEAVASLRYSPITYPSVLGEPLHGEDVASTIQRGTRDWERAMRCIRHALRTTPSPDWW 446

Query: 534 KRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASV 593
           KRVLLVAPCYRSP+QGPTPGAVFTSEMICEATIDRIFELLKLTNS               
Sbjct: 447 KRVLLVAPCYRSPSQGPTPGAVFTSEMICEATIDRIFELLKLTNS--------------- 506

Query: 594 DVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRT 653
                        +IHCWQEWLVFSDIF+FLMKSGCIDF DFVAKL+SRV EGGHHVLRT
Sbjct: 507 -------------EIHCWQEWLVFSDIFYFLMKSGCIDFVDFVAKLFSRVAEGGHHVLRT 566

Query: 654 NHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQ 713
           NHVTWLFAQIIRVE+V++ALNSDARKVETTRK+LSFHREDKS DPNNPQSILL+FISSCQ
Sbjct: 567 NHVTWLFAQIIRVEIVITALNSDARKVETTRKLLSFHREDKSADPNNPQSILLDFISSCQ 626

Query: 714 NLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASK 749
           NLRIWSLNT TREYLNNEQLQKGKQIDEWWRQASK
Sbjct: 627 NLRIWSLNTITREYLNNEQLQKGKQIDEWWRQASK 633

[Close]

BLAST of Spg008492 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 765.8 bits (1976), Expect = 3.6e-221
Identity = 399/610 (65.41%), Postives = 465/610 (76.23%), Query Frame = 0


Query: 140 NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRA 199
           NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRA
Sbjct: 52  NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRA 111

Query: 200 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQ-AAPTVSSTNLSQSGVLPS 259
           EF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG Q AA T  S+  S   V+P 
Sbjct: 112 EFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP- 171

Query: 260 SNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSA 319
                      S NP S LPS HGI SP+ S +        S      ++  G     +A
Sbjct: 172 ----------VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENA 231

Query: 320 VRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEES 379
           +R +  +R  A++SLRQL CKIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S
Sbjct: 232 MRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDS 291

Query: 380 ENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI 439
              KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Sbjct: 292 VG-KSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLI 351

Query: 440 LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGE 499
           +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGE
Sbjct: 352 MEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGE 411

Query: 500 PLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQ-GPTPGA 559
           PL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAPCYR   Q GP PGA
Sbjct: 412 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGA 471

Query: 560 VFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEW 619
           VFTS+MICEA IDRI ELLKLTNSGN    I L         ++     +    +CWQEW
Sbjct: 472 VFTSDMICEAIIDRIVELLKLTNSGNDCFGIDL---------VSVTFPPLYADANCWQEW 531

Query: 620 LVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALN 679
           LVFSDIFFFL+KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALN
Sbjct: 532 LVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALN 591

Query: 680 SDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ 739
           SDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Sbjct: 592 SDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLL 633

Query: 740 KGKQIDEWWR 745
           KGKQIDEWWR
Sbjct: 652 KGKQIDEWWR 633

[Close]

BLAST of Spg008492 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 757.3 bits (1954), Expect = 1.3e-218
Identity = 395/610 (64.75%), Postives = 458/610 (75.08%), Query Frame = 0


Query: 140 NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRA 199
           NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRA
Sbjct: 52  NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRA 111

Query: 200 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQ-AAPTVSSTNLSQSGVLPS 259
           EF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG Q AA T  S+  S   V+P 
Sbjct: 112 EFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP- 171

Query: 260 SNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSA 319
                      S NP S LPS HGI SP+ S +        S      ++  G     +A
Sbjct: 172 ----------VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENA 231

Query: 320 VRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEES 379
           +R +  +R  A++SLRQL CKIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S
Sbjct: 232 MRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDS 291

Query: 380 ENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI 439
              KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Sbjct: 292 VG-KSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLI 351

Query: 440 LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGE 499
           +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGE
Sbjct: 352 MEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGE 411

Query: 500 PLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQ-GPTPGA 559
           PL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAPCYR   Q GP PGA
Sbjct: 412 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGA 471

Query: 560 VFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEW 619
           VFTS+MICEA IDRI ELLKLTNS                              +CWQEW
Sbjct: 472 VFTSDMICEAIIDRIVELLKLTNS----------------------------DANCWQEW 531

Query: 620 LVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALN 679
           LVFSDIFFFL+KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALN
Sbjct: 532 LVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALN 591

Query: 680 SDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ 739
           SDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Sbjct: 592 SDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLL 614

Query: 740 KGKQIDEWWR 745
           KGKQIDEWWR
Sbjct: 652 KGKQIDEWWR 614

The following BLAST results are available for this feature:

BLAST of Spg008492 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875594.1	0.0e+00	90.26	mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida]	[more]
XP_016898808.1	0.0e+00	90.49	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cu...	[more]
XP_008467111.1	0.0e+00	89.77	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cu...	[more]
XP_022973546.1	0.0e+00	89.30	mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]	[more]
KAG7016782.1	0.0e+00	89.30	Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma s...	[more]

BLAST of Spg008492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	5.1e-220	65.41	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]
Q55BN0	7.1e-04	23.98	Putative mediator of RNA polymerase II transcription subunit 23 OS=Dictyostelium...	[more]

BLAST of Spg008492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DS63	0.0e+00	90.49	mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis mel...	[more]
A0A5A7TSF1	0.0e+00	89.77	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S3CSR7	0.0e+00	89.77	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A6J1I8Y2	0.0e+00	89.30	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=36...	[more]
A0A6J1CXU7	0.0e+00	85.83	mediator of RNA polymerase II transcription subunit 23 OS=Momordica charantia OX...	[more]

BLAST of Spg008492 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	3.6e-221	65.41	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	1.3e-218	64.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 783..819
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 136..255 coord: 605..746 coord: 321..579
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 605..746
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 136..255 coord: 321..579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008492.1	Spg008492.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus