Spg008287 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008287
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFerredoxin
Locationscaffold5: 27417683 .. 27418147 (+)
RNA-Seq ExpressionSpg008287
SyntenySpg008287
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACCATGTCAACTGCAAAGCTTCCTTCCCGCTTCATGTTCAATGAGCCGTGTAAAAACCAATTCAAAAGCACAATCATCAAGTGGCCATCTTCAATCGGATCGACGAGCAACATTTCGCAATCCTTCGGCTTGAAATCATCTCCCTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTAGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCATATTCTTGCAGGGCAGGAGCGTGCTCCACATGCGCAGGGAAACTTGTTTCGGGTTCAGTCGATCAGTCAGACGGGTCGTTCCTCGACGATAGTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACACCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGA

mRNA sequence

ATGTCAACCATGTCAACTGCAAAGCTTCCTTCCCGCTTCATGTTCAATGAGCCGTGTAAAAACCAATTCAAAAGCACAATCATCAAGTGGCCATCTTCAATCGGATCGACGAGCAACATTTCGCAATCCTTCGGCTTGAAATCATCTCCCTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTAGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCATATTCTTGCAGGGCAGGAGCGTGCTCCACATGCGCAGGGAAACTTGTTTCGGGTTCAGTCGATCAGTCAGACGGGTCGTTCCTCGACGATAGTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACACCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTTCCTTCCCGCTTCATGTTCAATGAGCCGTGTAAAAACCAATTCAAAAGCACAATCATCAAGTGGCCATCTTCAATCGGATCGACGAGCAACATTTCGCAATCCTTCGGCTTGAAATCATCTCCCTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTAGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCATATTCTTGCAGGGCAGGAGCGTGCTCCACATGCGCAGGGAAACTTGTTTCGGGTTCAGTCGATCAGTCAGACGGGTCGTTCCTCGACGATAGTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACACCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGA

Protein sequence

MSTMSTAKLPSRFMFNEPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI
Homology
BLAST of Spg008287 vs. NCBI nr
Match: XP_022944832.1 (uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+STIIK PSSIGSTSNIS+SFGLKSSPS RTTAMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

BLAST of Spg008287 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+STIIK PSSIGSTSNIS+SFGLKSSPS RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

BLAST of Spg008287 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 138/154 (89.61%), Postives = 145/154 (94.16%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFNEPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVY 60
           MSTMSTA LPSRF  N PCKN+++ TIIK PSSIGS SNIS+SFGLKSSPSFRT+AMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD+QMAEGYLLTCVS PTADCVIHTHKE ELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

BLAST of Spg008287 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+S+IIK PSSIGSTSNIS+SFGLKSS S RTTAMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

BLAST of Spg008287 vs. NCBI nr
Match: KAG6573622.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.2 bits (700), Expect = 6.6e-70
Identity = 137/153 (89.54%), Postives = 143/153 (93.46%), Query Frame = 0

Query: 4   MSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVYK 63
           MSTAKLPSR MFN   PCKNQF+STIIK PSSIGSTSNIS+SFGLKSSPS RTTAMAVYK
Sbjct: 1   MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 60

Query: 64  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSF 123
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSDGSF
Sbjct: 61  IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 120

Query: 124 LDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           LDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 153

BLAST of Spg008287 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-44
Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 0

Query: 22  QFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVYKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+   S +++   LK+S     +AMAVYK+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTA 141
           ILDAAE AGV+LPYSCRAGACSTCAGK+ SGSVDQSDGSFLDD Q  EGY+LTCVS+P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEEEL 154
           DCVIHTHKE +L
Sbjct: 140 DCVIHTHKEGDL 151

BLAST of Spg008287 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 92/154 (59.74%), Postives = 117/154 (75.97%), Query Frame = 0

Query: 4   MSTAKLPSRFMFNEPCKNQFKSTII---KWPSSIGSTSNISQSFGLK-SSPSFRTTAMAV 63
           M+T ++ S  M     ++Q  + +I    +  S+GST  +S+SFGLK S+ S   T  AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFL+DS + +GY+LTCV++P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

BLAST of Spg008287 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-39
Identity = 80/123 (65.04%), Postives = 98/123 (79.67%), Query Frame = 0

Query: 32  SSIGSTSNISQSFGLKSSPSFRTTAMAV-YKIKLVEPCGKEHEFEASDDTYILDAAEEAG 91
           S  G     +++ G + S  F  +A AV +K+KLV P G EHEFEA DDTYIL+AAE AG
Sbjct: 32  SFAGHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAG 91

Query: 92  VDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKE 151
           V+LP+SCRAG+CSTCAG++ +G VDQS+GSFLDD QMAEGYLLTC+S+P ADCVIHTHKE
Sbjct: 92  VELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKE 151

Query: 152 EEL 154
           E+L
Sbjct: 152 EDL 154

BLAST of Spg008287 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0

Query: 38  SNISQSFGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R TAMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           SCRAG+CS+CAGK+VSGS+DQSD SFLDD QM+EGY+LTCV++PT+D VI THKEE ++
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

BLAST of Spg008287 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 0

Query: 31  PSSIGSTSNISQS-FGLKSSPS-FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEE 90
           P +    +N+ ++ FGLKSS S  R TAMA YK+ LV P GK+ E E  DD YILDAAEE
Sbjct: 23  PMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEE 82

Query: 91  AGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTH 150
           AG+DLPYSCRAG+CS+CAGK+ SGSV+Q DGSFLDD Q+ EG++LTCV++PT D  I TH
Sbjct: 83  AGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETH 142

Query: 151 KEEEL 154
           KEEEL
Sbjct: 143 KEEEL 146

BLAST of Spg008287 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+STIIK PSSIGSTSNIS+SFGLKSSPS RTTAMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

BLAST of Spg008287 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFN--EPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+STIIK PSSIGSTSNIS+SFGLKSSPS RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

BLAST of Spg008287 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 138/154 (89.61%), Postives = 145/154 (94.16%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFNEPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVY 60
           MSTMSTA LPSRF  N PCKN+++ TIIK PSSIGS SNIS+SFGLKSSPSFRT+AMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD+QMAEGYLLTCVS PTADCVIHTHKE ELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

BLAST of Spg008287 vs. ExPASy TrEMBL
Match: A0A6J1HTH8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFNE--PCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMA 60
           MSTMSTAKLPSR MFN   PCKNQF+S+IIK PSSIGSTSNIS+SFGLKS  S RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

BLAST of Spg008287 vs. ExPASy TrEMBL
Match: A0A5A7SWN7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0

Query: 1   MSTMSTAKLPSRFMFNEPCKNQFKSTIIKWPSSIGSTSNISQSFGLKSSPSFRTTAMAVY 60
           MSTMSTAKLP+ FM+N   KNQ  STIIK PSSIGST NI +SFGL S PSFR  AMAV+
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD QMA+GYLLTCVS PTADCVIHTHKEEELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

BLAST of Spg008287 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 92/154 (59.74%), Postives = 117/154 (75.97%), Query Frame = 0

Query: 4   MSTAKLPSRFMFNEPCKNQFKSTII---KWPSSIGSTSNISQSFGLK-SSPSFRTTAMAV 63
           M+T ++ S  M     ++Q  + +I    +  S+GST  +S+SFGLK S+ S   T  AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFL+DS + +GY+LTCV++P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

BLAST of Spg008287 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-39
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0

Query: 38  SNISQSFGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R TAMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           SCRAG+CS+CAGK+VSGS+DQSD SFLDD QM+EGY+LTCV++PT+D VI THKEE ++
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

BLAST of Spg008287 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 74/120 (61.67%), Postives = 93/120 (77.50%), Query Frame = 0

Query: 37  TSNISQSFGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLP 96
           ++N    FGLKS  +   R TAMA YK+K + P G E E E  DD Y+LDAAEEAG+DLP
Sbjct: 30  SANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLP 89

Query: 97  YSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           YSCRAG+CS+CAGK+VSGSVDQSD SFLDD Q+ EG++LTC ++PT+D  I THKEE+++
Sbjct: 90  YSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

BLAST of Spg008287 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 127.9 bits (320), Expect = 7.2e-30
Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = 0

Query: 31  PSSIGSTSNISQS--FGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAA 90
           PS    T+ ++ +  FGL SS     +  A    K+KL+ P G+E E E ++D  IL++A
Sbjct: 21  PSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESA 80

Query: 91  EEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIH 150
           E AG++LPYSCR+G C TC GKLVSG VDQS GSFL++ Q+ +GY+LTC++ P  DCV++
Sbjct: 81  ENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVY 140

Query: 151 THKEEELI 155
           THK+ +LI
Sbjct: 141 THKQSDLI 148

BLAST of Spg008287 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 51  SFRTTAMAV---YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAG 110
           +F TT   +   YK+ +VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  
Sbjct: 41  NFLTTGRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPA 100

Query: 111 KLVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           KLV+G+VDQS G  L D  +  GY L C S+PT+DC I    EEEL+
Sbjct: 101 KLVTGTVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELL 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022944832.12.1e-7189.74uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata][more]
XP_022944833.12.1e-7189.74uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata][more]
XP_022142635.13.5e-7189.61ferredoxin, root R-B2 [Momordica charantia][more]
XP_023541284.15.1e-7088.46ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo][more]
KAG6573622.16.6e-7089.54Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
P277881.0e-4466.67Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1[more]
Q9ZQG81.7e-4459.74Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1[more]
P940441.7e-3965.04Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1[more]
O040901.2e-3764.71Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1[more]
O046833.5e-3764.00Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FZ831.0e-7189.74Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1[more]
A0A6J1FZ541.0e-7189.74Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1[more]
A0A6J1CLH41.7e-7189.61Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1[more]
A0A6J1HTH81.2e-6987.82Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1[more]
A0A5A7SWN74.3e-6785.71Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=... [more]
Match NameE-valueIdentityDescription
AT2G27510.11.2e-4559.74ferredoxin 3 [more]
AT1G10960.18.4e-3964.71ferredoxin 1 [more]
AT1G60950.12.1e-3761.672Fe-2S ferredoxin-like superfamily protein [more]
AT5G10000.17.2e-3049.22ferredoxin 4 [more]
AT4G14890.12.8e-1845.792Fe-2S ferredoxin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 58..154
e-value: 8.1E-47
score: 155.0
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 57..154
e-value: 5.5E-35
score: 121.1
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 66..140
e-value: 3.7E-21
score: 74.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 60..151
score: 12.734565
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 65..146
e-value: 3.70937E-33
score: 110.562
NoneNo IPR availablePANTHERPTHR43112FERREDOXINcoord: 4..153
NoneNo IPR availablePANTHERPTHR43112:SF30FERREDOXIN-3, CHLOROPLASTICcoord: 4..153
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 97..105
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 52..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008287.1Spg008287.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0009507 chloroplast
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding