Spg008247 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008247
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold5: 27522798 .. 27526533 (-)
RNA-Seq ExpressionSpg008247
SyntenySpg008247
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGGCAGGGAGATCGTTAAGCAAGCTTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTTGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAGTACAAGGGCTCCATTAGGGAGCTATAGCTAGAAAGGAAAGTGAAATATAGGGGCTGTTGAATCAAGGGACTCAGTGCGATGAGTTGGATGTGGTCAGGAAAGAAAAACAGTTAGAAATCTCCTAGATGACGATGAGATATACTGGAAACAACGGGCTCAGGACGATTGGTTAACTGAGGGGACAGAAATACTAGATGGTTTCACATGAAGGCAAATAGCAGAAAGAAGGTCAACAAAATTTGCGGACTCTACGATGCAAGTGGGGGTTGGGTGGAGACCGATGAGGATATGGAGAGGGTTGCCAACAACTATTTTCAAGCTCTGTTTCAATCGTCTAGCCCCCACTTGGATGCCATTGATGACATCCTGGAGGTGACCCCTGTTTGTATTTCAGAGGTCCAAAACAGGAAGCTCTTGGTTCCGTTCACTAGGGAGGAGATTTATGGAGTAGTTAAGAGTATGCATCCTACTAAGGCTCCGGGCCCTGATGGATGCAAGCTATTTTTCTACCAGAAATACTGGGATGTGGTAGGACGAGATATTGTGACTTCTGCCTGCAATTCCTGAATGGGGAAGGCCAGATAGATAGAATAAACAAGACATACATTGTTTTGATCCCGAAGGTAAAGGAGCCAAAAACCATGAAGGATTCAGACCTATAAGTTTGTGCTCGGTGATCTACAAAATTATATCCAAGGTACTAGCGAATAGGCTAAAACAGGTGTTGAATCATATAATTTCCCCTAGTCAATCAGCGTTTGTCCCTGGAAGGCTCATAACTGATAATGCGCTTGTCGGGTTTGAATGCATTCATGCTGTAAATTCCAAAAAGAAAGGTAAATCAGGGGTTGTGGCTCTCAAATTGGATATGAGCAAGGCTTATGACCGGGTAGAATGGGTTTATCTTCGTAAGTTGATGGCTAAGTTGGGGTTCGAGGACAGATGGATTGCTCTTATCATGCAATGTGTGGAGTCGGTCAGCTTCCAGGTGCTTTTGAATGGAGTTCCAAGAGCTGAGTTCTCTCCCAAGAGAGGGCTCCGTCAGGGTGACCCTCTATCCCCTTATTTGTTCATCATGTGCGCAGAAGGCTTATCCAGGCTCCTCAACTACTCAGAATCCAAAAAACTGATGACAAGTTTGCGAATAAATAGGTACTGTCCTAGTGTGACTCATTTATTCTATGCAGATGATAGTTTACTATTTTTTGAGGCCTCTGAGAATGATTGCATTAATATTAAGAAAACTCTTGAAACTTATGAGAAGGCGTCTGGGCAGATTATAAATTTTGATAAATCCAACTTCATGACTAGTCCTAATACTAACTGTGATCTAGCTAGAAAGATCGAGAATATTTTGCAGGTTTCACACACGGAGAGCTTGGGGCAATACCTGGGGTTCCCGTCACAGAATGCTAGAAGCCAGAAGGGAAATTTTCAACCACATCAAGGATCGAGTCTGGAGAGTACTACAGGATGGAAAGGGAGGTTCTTCTCAGCTGCTGGAAGGGAGATTCTAATTAAATCAGTGGCCCAAGCCATTCCTAACTATGCAATGAGCTGTTTTAAATTCCCTATGTCTCTCTGTAATGAACTTAATTCCATGTGTGCCAGGTTTTGGTGGGGAGTGGAGGACAAAAAGAGCAAGATTCATTGGAGAAGTTGGAAAAAGTTGTGCATCAACAAAAGGCTTGGAGGCATGGGATTTAGAGATATTTCGGTGTTCAACCAGGCGATGTTAGCCAAGCAGAGTTGGAGGATAATTCACAATCCGAATAGCCTCCTGACGAGAGTCCTCAGAGGCAGATATTTTAAGAATGGAAATTTCCTAAAGGCGGAGATGGGAAACAATCCTTCTTTCACGTGGAGAAGCATTGTGTGGGGGGAGGGAGTGTTTCGGAAAGGCTACAGATGGCGAATAGGGGATGGATTCAATGTGGATGAGGGGTCAGATCCTTGGATCCCAAAAGATGGTGATTGCAAGCCACTGCTAGTTCATAGAAACGTTCAACAGTTTTCAGTAGCTCAACTAATTCAACCCTCGGGGGTTGGAATGAGTCACTGGTTAAGGGGCTGTTTTTGGAGAGCAATGCTAAAGCCATTTTAAATATCCTCTCAGTCCGCTGAACAAGGAGGATTCTATTATTTGGCATCATGATACAAAAGGATTCTTTTCTGTGAAAAGCGCGTATAGACTGGGGATCCAGGTTCAAGCATCCAATGAGGCGTCAATATCTCACAATGGGAAGATGGAAGCTCTATGGGATATATATTGGAAAACCCCAGTTCCCCCCAAAATCAGAGTGTGCAGGTGGACAATTTTTCATGACATCCTCCCAACTCGCACAAATCTTATTAAAAGGGGAATGGAAGTTAACCCACTGTGTATTTTGTGCAAGACAAAGCTGGAAACGATCACACATCTGCTGTGGGGAGTGCAATCAAACAAAGGTATGTGGGCTCAATTCTTCCCTTTGCCTAATAGTTTGTTTCTGATGAACAGGGAAAGCTTGGTCGGCGGCGGATTATTGTGAATTCATTTGGAGAGGTGGTGATACGGATCAGTTAACAGAAATGAATATCAAGTGGAGCACAGTTATTTCTTGGCAGATTTGGAAATATAGAAACGAACTTCTCCATGGAAATTAGAATTTCAATCCAGAGTATTTCAAGCATCAAATGAGGAGAGCTATTGAGTATTTTACCGGCGATGTGAAGACCGATGGCCAGGCGGATTGGAGCGAGATCTCGAACAGACCCGTTGACATGGATCAAGCTACGCCGGAACACAGAGAGCCTGCCCCAACCGCGACAAATGATCGGCAAGCGACGATTGCGTCTGTTAGATGGATGCCGCCGGCGATGGGACTCTGGAAGTTGAACAATGACGCGTCCTGGAATGAGGAAAAGAAGTTAGGGGGAGTGGGCTGGGTGTTGCGAGATGAGAAAGGCAACCTGATTTCTACTGGTTTTCGGGTTCTTCATCAGCAGTGGCTGGAGGCCCTTGCCGTCTCAGATGGTTTGCGTTTGATTCCTATCGAGTCCCCTCTGGTGATTGTTGAGACCCCAAATTGGGGGTTTAGCTATAGATGGCTATAATATCCACAATGTATACAAAAGAAATCATAAATTTGAGCAAAATAAGAGGAAAGAAATGACCGTCGAGAACTCCGTCGCTAGCCCTTGCCTTCTAGAGTGCTCCCAAAAAGCTCCCCAAAATTTTCTCACTCTTAACTCTCAAAAAGGCTAAAAAGCCTTGAGAGAATGCTCAAAGAGAGCAATGGAAGGAAAGGAAGGAAAGGATGGTGAAATGATTGATGAGAAAATGGGCACCAAGGGGGTCAATTTATAGGCTTGGAATAGGGAAAGCGTCGCGACGCTGTGACGTCATCAACTTGTCCGCCAAGAAATGGGACAGCGTCGCGATGCTGTGCGGTTTCCAGAACTAGCAGGCGCGGATTTGGGCTTGAAACTTGGGCCAACTTCTATTCTTTTTGGATCTTCTCTTGCATGGTTGACTCTTGGGCTCCCCCTTTGA

mRNA sequence

ATGGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGGCAGGGAGATCGTTAAGCAAGCTTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTTGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAATGGTTTCACATGAAGGCAAATAGCAGAAAGAAGGTCAACAAAATTTGCGGACTCTACGATGCAAGTGGGGGTTGGGTGGAGACCGATGAGGATATGGAGAGGGTTGCCAACAACTATTTTCAAGCTCTGTTTCAATCGTCTAGCCCCCACTTGGATGCCATTGATGACATCCTGGAGGTTCAAGCATCCAATGAGGCGTCAATATCTCACAATGGGAAGATGGAAGCTCTATGGGATATATATTGGAAAACCCCAGTTCCCCCCAAAATCAGAGTGTGCAGGTGGACAATTTTTCATGACATCCTCCCAACTCGCACAAATCTTATTAAAAGGGGAATGGAAGTTAACCCACTGTGTATTTTGTGCAAGACAAAGCTGGAAACGATCACACATCTGCTGTGGGGAGTGCAATCAAACAAAGAGTATTTCAAGCATCAAATGAGGAGAGCTATTGAGTATTTTACCGGCGATGTGAAGACCGATGGCCAGGCGGATTGGAGCGAGATCTCGAACAGACCCGTTGACATGGATCAAGCTACGCCGGAACACAGAGAGCCTGCCCCAACCGCGACAAATGATCGGCAAGCGACGATTGCGTCTGTTAGATGGATGCCGCCGGCGATGGGACTCTGGAAGTTGAACAATGACGCGTCCTGGAATGAGGAAAAGAAGTTAGGGGGAGTGGGCTGGGTGTTGCGAGATGAGAAAGGCAACCTGATTTCTACTGGTTTTCGGGTTCTTCATCAGCAGTGGCTGGAGGCCCTTGCCGTCTCAGATGGTTTGCGTTTGATTCCTATCGAGTCCCCTCTGCGTCGCGATGCTGTGCGGTTTCCAGAACTAGCAGGCGCGGATTTGGGCTTGAAACTTGGGCCAACTTCTATTCTTTTTGGATCTTCTCTTGCATGGTTGACTCTTGGGCTCCCCCTTTGA

Coding sequence (CDS)

ATGGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGGCAGGGAGATCGTTAAGCAAGCTTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTTGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAATGGTTTCACATGAAGGCAAATAGCAGAAAGAAGGTCAACAAAATTTGCGGACTCTACGATGCAAGTGGGGGTTGGGTGGAGACCGATGAGGATATGGAGAGGGTTGCCAACAACTATTTTCAAGCTCTGTTTCAATCGTCTAGCCCCCACTTGGATGCCATTGATGACATCCTGGAGGTTCAAGCATCCAATGAGGCGTCAATATCTCACAATGGGAAGATGGAAGCTCTATGGGATATATATTGGAAAACCCCAGTTCCCCCCAAAATCAGAGTGTGCAGGTGGACAATTTTTCATGACATCCTCCCAACTCGCACAAATCTTATTAAAAGGGGAATGGAAGTTAACCCACTGTGTATTTTGTGCAAGACAAAGCTGGAAACGATCACACATCTGCTGTGGGGAGTGCAATCAAACAAAGAGTATTTCAAGCATCAAATGAGGAGAGCTATTGAGTATTTTACCGGCGATGTGAAGACCGATGGCCAGGCGGATTGGAGCGAGATCTCGAACAGACCCGTTGACATGGATCAAGCTACGCCGGAACACAGAGAGCCTGCCCCAACCGCGACAAATGATCGGCAAGCGACGATTGCGTCTGTTAGATGGATGCCGCCGGCGATGGGACTCTGGAAGTTGAACAATGACGCGTCCTGGAATGAGGAAAAGAAGTTAGGGGGAGTGGGCTGGGTGTTGCGAGATGAGAAAGGCAACCTGATTTCTACTGGTTTTCGGGTTCTTCATCAGCAGTGGCTGGAGGCCCTTGCCGTCTCAGATGGTTTGCGTTTGATTCCTATCGAGTCCCCTCTGCGTCGCGATGCTGTGCGGTTTCCAGAACTAGCAGGCGCGGATTTGGGCTTGAAACTTGGGCCAACTTCTATTCTTTTTGGATCTTCTCTTGCATGGTTGACTCTTGGGCTCCCCCTTTGA

Protein sequence

MGKKSHLIPELSNINGLGDSRKFGQNMRIGREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKWFHMKANSRKKVNKICGLYDASGGWVETDEDMERVANNYFQALFQSSSPHLDAIDDILEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVLHQQWLEALAVSDGLRLIPIESPLRRDAVRFPELAGADLGLKLGPTSILFGSSLAWLTLGLPL
Homology
BLAST of Spg008247 vs. NCBI nr
Match: XP_024041921.1 (uncharacterized protein LOC112099052 [Citrus clementina])

HSP 1 Score: 93.6 bits (231), Expect = 3.9e-15
Identity = 61/193 (31.61%), Postives = 94/193 (48.70%), Query Frame = 0

Query: 133 ASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTK 192
           A+ S +    + W   W   +P KIR+  W    +ILP+  NL KR +   PLC L K  
Sbjct: 707 ATPSSSENPNSQWKFIWLLTLPEKIRIFVWRAVKNILPSAENLWKRKIIQEPLCQLYKNG 766

Query: 193 LETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTD------------GQADWSEISNRP 252
           +ETI H L G ++ K+ +K    R  E   G    D             +A+   ++   
Sbjct: 767 METIFHALVGYKAAKKIWK--TTRFAEDLKGSSDQDILSFLLALNSKRSKAEMEHLAEAV 826

Query: 253 VDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLR 312
           ++  Q T   ++PA     ++++ I    W PP  G  K+N DA+ N EK+L G+G V+R
Sbjct: 827 IEAYQRT---QKPAAAHIGNQRSLIRKA-WNPPQRGYVKVNVDAATNSEKQLSGLGAVIR 886

Query: 313 DEKGNLISTGFRV 314
           DE GN+I+   +V
Sbjct: 887 DENGNVIAAAIKV 893

BLAST of Spg008247 vs. NCBI nr
Match: XP_027182101.1 (uncharacterized protein LOC113780501 [Coffea eugenioides])

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-13
Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = 0

Query: 138 NGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETIT 197
           NG ++ +W   WK   P K+++  W I   ILPT + L  RG+ ++P C+LCK  +E + 
Sbjct: 47  NGSVKDVWPRLWKLNTPSKVKIFLWRICKGILPTSSTLNSRGVYLDPTCLLCKASVEDVN 106

Query: 198 HLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQ---ADW-----SEISNRPVDMDQATPE 257
           HL        + +      A+ + T  ++ D     + W     + +  R +++ Q   +
Sbjct: 107 HLFLCCPVAVQAW------ALSFLTLKIRLDSANQVSSWLLGLLNLLKKRDMELLQ---K 166

Query: 258 HREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIST 317
           +RE   +     + +IA + W  P +G  K N D +   E    GVG V+RDE+GN ++ 
Sbjct: 167 YREANTSPNTPIRTSIAPLHWKKPPVGFLKANFDGAVVSEYGYSGVGVVVRDERGNFVAG 226

Query: 318 GFRVLHQQWLEALAVSDGLRLIPI 334
               +  +  +     D L++I I
Sbjct: 227 TSHKIFVESAQHYFGGDSLKIINI 241

BLAST of Spg008247 vs. NCBI nr
Match: KAF4382082.1 (hypothetical protein F8388_001227 [Cannabis sativa])

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-13
Identity = 57/212 (26.89%), Postives = 97/212 (45.75%), Query Frame = 0

Query: 125 LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNP 184
           L  +  N A  S N    A W + W + + PK+++  W +FH  +P +T L KRGM +N 
Sbjct: 423 LRFRDPNIAECSDNSTSRAWWKVVWGSRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNL 482

Query: 185 LCILCKTKLETITHLLWGVQSNKEYFKH---------QMRRAIEY---FTGDVKTD---- 244
            C  CK+++E + H LW +    + +KH          +++A ++     G +  +    
Sbjct: 483 TCNRCKSQVEDVCHALWNIPKLHKVWKHFGFLHHFPSSLKQAPDFLMLMKGKLSEEFFIG 542

Query: 245 ------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMG 304
                  Q +     N+ ++ D   P   E      A   TN  Q  +  +V+W PP  G
Sbjct: 543 ITWLIWYQRNKCVFQNKDIEDDIWIPWATEMMEIHLASAQTNSHQNISKDTVKWSPPPPG 602

Query: 305 LWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS 309
            + +N DAS  E +   G+G ++RD  G L++
Sbjct: 603 TFMINTDASLIEGQPGCGLGVIIRDHLGALVT 634

BLAST of Spg008247 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-13
Identity = 61/224 (27.23%), Postives = 99/224 (44.20%), Query Frame = 0

Query: 125  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNP 184
            L+++     S S + K E  W+I W   +P KIR+  W    ++LP+  NL KR +   P
Sbjct: 791  LKIRFPAMPSSSESSKNE--WNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEP 850

Query: 185  LCILCKTKLETITHLLWGVQSNKEYFK--------------------HQMRRAIEYFTGD 244
             C LCK  +E + H L   ++ K+ ++                    H ++R       D
Sbjct: 851  TCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVD 910

Query: 245  V-------KTDGQADW-----SEISNRPVDMDQATPE---HREPAPTATNDRQATIASVR 304
            +       K + +  W      E     V   +A  E     +P+   ++ +Q  +A + 
Sbjct: 911  LFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLG 970

Query: 305  WMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRV 314
            W PP  G  K+N DA+ N EK L G+G V+RDE G + +T  +V
Sbjct: 971  WNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKV 1012

BLAST of Spg008247 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-13
Identity = 64/213 (30.05%), Postives = 94/213 (44.13%), Query Frame = 0

Query: 142  EALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLW 201
            E  W+  W   +P KIR+  W    ++LP+  NL KR +   PLC  C  KLETI H L 
Sbjct: 963  ENQWNAIWLLTLPEKIRIFAWRAAKNLLPSAENLWKRKVLQEPLCQFCNKKLETIFHALV 1022

Query: 202  GVQSNKEYFKHQMRRAIEYFTGDVKTDGQAD----------------------------- 261
            G +  ++ +K      I  F  D+K   + D                             
Sbjct: 1023 GCKVVQKIWK------ITRFEDDLKDSVEQDMLSLLIELKLRRSKDDIELLVTILWMIWN 1082

Query: 262  ----W-----SEISNRPVDMDQATPE--HREPAPTATN-DRQATIASVRWMPPAMGLWKL 314
                W     ++I +  V   +A  E   R   P AT+ D Q++     W PP  G +K+
Sbjct: 1083 ARNNWIFKGVNDIPHVTVSKAEAVLEAFRRTQLPAATHIDIQSSSKLKAWKPPQRGYFKV 1142

BLAST of Spg008247 vs. ExPASy TrEMBL
Match: A0A803P4U9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.7e-14
Identity = 63/246 (25.61%), Postives = 105/246 (42.68%), Query Frame = 0

Query: 91   GWVETDEDMERVANNYFQALFQSSSPHLDAIDDILEVQASNEASISHNGKMEALWDIYWK 150
            GW  T   +  VA+ Y                  L  +  N A  S N    A W + W 
Sbjct: 1486 GWTLTTNGLYTVASGY-----------------KLRFRDPNIAECSDNSTSRAWWKVVWG 1545

Query: 151  TPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYF 210
            + + PK+++  W +FH  +P +T L KRGM +N  C  CK+++E + H LW +    + +
Sbjct: 1546 SRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNLTCNRCKSQVEDVCHALWNIPKLHKVW 1605

Query: 211  KH---------QMRRAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATP 270
            KH          +++A ++     G +  +           Q +     N+ ++ D   P
Sbjct: 1606 KHFGFLHHFPSSLKQAPDFLMLMKGKLSEEFFIGITWLIWYQRNKCVFQNKDIEDDIWIP 1665

Query: 271  EHREP-----APTATNDRQ-ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDE 309
               E      A   TN  Q  +  +V+W PP  G + +N DAS  E +   G+G ++RD 
Sbjct: 1666 WATEMMEIHLASAQTNSHQNISKDTVKWSPPPPGTFMINTDASLIEGQPGCGLGVIIRDH 1714

BLAST of Spg008247 vs. ExPASy TrEMBL
Match: A0A2N9FI47 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18368 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.0e-14
Identity = 57/198 (28.79%), Postives = 92/198 (46.46%), Query Frame = 0

Query: 128  QASNEASISHNGK--MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPL 187
            Q+  +   S NG+   + LW + W   VPPK+R+  W    DILPT+T L  +G+     
Sbjct: 1207 QSKGDLRASSNGRNPYQFLWSVIWSAQVPPKVRLFMWRACLDILPTKTKLFGKGLIHTVS 1266

Query: 188  CILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYF--TGDVKTDGQADW-------SEI 247
            C+ C+ +LE+  H+LW  +  +  +        E+    GD+    +  W       ++I
Sbjct: 1267 CLWCEEELESSAHVLWQCEFAQRIWSACPVTISEFLLGVGDLNARNRLHWENKLLSVNDI 1326

Query: 248  SNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVG 307
              R V M     E            +   AS RW PP  G +KLN   S +   KL G+G
Sbjct: 1327 WQRAVAMVMDFKEVGLQVQEVGGSSEILRAS-RWRPPDQGFYKLNMGFSVDPVLKLVGMG 1386

Query: 308  WVLRDEKGNLISTGFRVL 315
             ++RD  G++++T ++ L
Sbjct: 1387 SLIRDSDGSVMATMYQKL 1403

BLAST of Spg008247 vs. ExPASy TrEMBL
Match: A0A7J6GGV5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001227 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 57/212 (26.89%), Postives = 97/212 (45.75%), Query Frame = 0

Query: 125 LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNP 184
           L  +  N A  S N    A W + W + + PK+++  W +FH  +P +T L KRGM +N 
Sbjct: 423 LRFRDPNIAECSDNSTSRAWWKVVWGSRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNL 482

Query: 185 LCILCKTKLETITHLLWGVQSNKEYFKH---------QMRRAIEY---FTGDVKTD---- 244
            C  CK+++E + H LW +    + +KH          +++A ++     G +  +    
Sbjct: 483 TCNRCKSQVEDVCHALWNIPKLHKVWKHFGFLHHFPSSLKQAPDFLMLMKGKLSEEFFIG 542

Query: 245 ------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMG 304
                  Q +     N+ ++ D   P   E      A   TN  Q  +  +V+W PP  G
Sbjct: 543 ITWLIWYQRNKCVFQNKDIEDDIWIPWATEMMEIHLASAQTNSHQNISKDTVKWSPPPPG 602

Query: 305 LWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS 309
            + +N DAS  E +   G+G ++RD  G L++
Sbjct: 603 TFMINTDASLIEGQPGCGLGVIIRDHLGALVT 634

BLAST of Spg008247 vs. ExPASy TrEMBL
Match: A0A803P5M6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.8e-13
Identity = 64/236 (27.12%), Postives = 98/236 (41.53%), Query Frame = 0

Query: 125  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNP 184
            L     ++ S S + K    W  +W   +PPKIR+  W +F +ILPT   L KR +  + 
Sbjct: 970  LATTLEDQNSSSTSNKQSEWWKFFWNLKLPPKIRIFAWKVFQNILPTAVALFKRKVLDSG 1029

Query: 185  LCILCKTKLETITHLLWGVQSNKEY-----FKHQMRRAIEYFTGD--------------- 244
             C LC +  E+I H L+  +  K+      F+    +A   F GD               
Sbjct: 1030 ECSLCTSNWESIGHALFSCKHAKDIWKLSRFRIDFSQAHNMFNGDYLYHLSTIYQQHDFE 1089

Query: 245  --------VKTD-------GQA-----------------DWSEISNRPVDMDQATPEHRE 304
                    + TD       GQ                  + +++ NRPV    AT  H  
Sbjct: 1090 TLLCVLWGIWTDRNKVVHGGQPRHPTAIVQYASKFYEDFNKAKLQNRPV---AATSSHHS 1149

Query: 305  PAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS 309
               T+  D+       RW PP    +KLN DA+ N E+K  G+G +LRD++G +++
Sbjct: 1150 SPSTSATDQHVQ----RWRPPVRNGYKLNVDAATNIEQKKLGIGAILRDQQGTVLA 1198

BLAST of Spg008247 vs. ExPASy TrEMBL
Match: A0A2S3I1D8 (Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_6G095500 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-13
Identity = 59/211 (27.96%), Postives = 91/211 (43.13%), Query Frame = 0

Query: 125 LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNP 184
           LEV   NE + S       +W   WK  +PPKI++  W + H+ LPT+  L +R +E   
Sbjct: 120 LEVSKLNEPNSSDG---SWIWKRLWKLKIPPKIQIFWWRVVHNFLPTKMELHRRHVEPEA 179

Query: 185 LCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTG-DVKTDGQADWSEISNRPVDM 244
            C  C    E++ H+++     + ++       ++  TG  +    QA W +        
Sbjct: 180 TCYTCGAATESLFHIVFECLVARMFWDE-----VKKLTGIKIPKLHQATWVK-------- 239

Query: 245 DQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEK 304
                         T D  + +  VRW+ P  G  K+N DA+++     G  G VLRD  
Sbjct: 240 -----------DLLTGDHCSEVTRVRWLGPPSGWMKVNTDAAFSLSNSTGSTGAVLRDHS 299

Query: 305 GNLISTGFR----VLHQQWLEALAVSDGLRL 331
           G++ +   R    V      EALAV DGL L
Sbjct: 300 GSVRAAAARFYPCVSDALMAEALAVRDGLIL 303

BLAST of Spg008247 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-09
Identity = 53/216 (24.54%), Postives = 79/216 (36.57%), Query Frame = 0

Query: 141 MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLL 200
           +  ++   WK+   PKI+   W    + LP    L  R +     CI C +  ET+ HLL
Sbjct: 250 LNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLL 309

Query: 201 ---------WGVQSNKEYFKHQMRRAIE---YFTGDVKTDGQADWSEISN---------- 260
                    W + S       +   +I    Y+  ++  +G   W + S           
Sbjct: 310 FKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNL-GNGNPQWEKASQLVPWLLWRLW 369

Query: 261 -------------------RPVDMDQATPEHREPAPTATNDRQATIASV-RWMPPAMGLW 315
                              R  + D      R  A +     Q   +S  RW PP     
Sbjct: 370 KNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWV 429

BLAST of Spg008247 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 34/116 (29.31%), Postives = 49/116 (42.24%), Query Frame = 0

Query: 199 LLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQADWSEISNRPVDMDQATPEHREPAPTAT 258
           LLW +  ++      M +  EY   +V      D+ E S R           RE    A+
Sbjct: 80  LLWRLWKSR---NELMFKGKEYDAPEVLRRAMEDFEEWSTR-----------RELEGKAS 139

Query: 259 NDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVL 315
             +     SV+W  P     K N DA+W  E    G+GW+LR+E G ++  G R L
Sbjct: 140 GPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARAL 181

BLAST of Spg008247 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.7e-05
Identity = 44/208 (21.15%), Postives = 72/208 (34.62%), Query Frame = 0

Query: 149 WKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKE 208
           WK    PKI+   W +    L T  NL +R +  +P C  C  + ET  HL +     ++
Sbjct: 19  WKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQ 78

Query: 209 YFK-----HQ--------MRRAIEYFTGDVKTDGQADWSEI----------SNRPVDMDQ 268
            ++     HQ        M   +E        + Q     +          S   +   Q
Sbjct: 79  VWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQ 138

Query: 269 ATPEHREPAPTATND-----------------------RQATIASVRWMPPAMGLWKLNN 311
            +   +     A ND                       +Q T+A  +W  P     K N 
Sbjct: 139 KSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYNY 198

BLAST of Spg008247 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = 0

Query: 267 SVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTG 311
           + +W PP     K N DAS +E   + G+GW+LR+ +G +I  G
Sbjct: 102 NTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECG 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024041921.13.9e-1531.61uncharacterized protein LOC112099052 [Citrus clementina][more]
XP_027182101.11.6e-1326.47uncharacterized protein LOC113780501 [Coffea eugenioides][more]
KAF4382082.12.2e-1326.89hypothetical protein F8388_001227 [Cannabis sativa][more]
XP_024956542.18.2e-1327.23uncharacterized protein LOC112498908 [Citrus sinensis][more]
XP_024038343.18.2e-1330.05uncharacterized protein LOC112097373 [Citrus clementina][more]

Pages

Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A803P4U94.7e-1425.61Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9FI478.0e-1428.79CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1836... [more]
A0A7J6GGV51.0e-1326.89Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001227 PE=4 SV=1[more]
A0A803P5M66.8e-1327.12Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2S3I1D88.8e-1327.96Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_6G095500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.14.5e-0924.54Ribonuclease H-like superfamily protein [more]
AT2G34320.11.0e-0529.31Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT3G25270.16.7e-0521.15Ribonuclease H-like superfamily protein [more]
AT5G65005.11.9e-0438.64Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 136..201
e-value: 2.1E-15
score: 57.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008247.1Spg008247.1mRNA