Spg008205 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008205
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP-dependent helicase ATRX
Location	scaffold2: 19191047 .. 19194525 (+)
RNA-Seq Expression	Spg008205
Synteny	Spg008205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGACCAAGAGAGTCTCGACCAACGTGGGAGGAGATTCATCTTCGGTTGGAAAAGAGGCAGAGCCTACCACCGCCCTCTCACCACGAGCAACAACCGTACGCTTGCTGTCGGTTGAACAAGATGAGAAAATCTTGAAGAATGATGTGGGTGAGATCAAGAAAACCTTAGAAATAATCTACGAGAAGTTGGGAATTAAACCGAATCAACAATCAACAAACCCGATGATGCAAACTAGGAATGGAACAAAGGAGCTGAATTCAAAACAAGAAAAGCTAGGAGCTGAATTCAAAACAAGAAAAGCTAGGAGCTGAATTCAAAACAAGACAGTGGCAAGAAAAGCTAGGAATGGAACAAAGAGTGGTCCAAGAAGTAGATTTGCCTCCAAGAATGGTCCAAGAAGTAGATTCTCCTCCAAGAATCCATCAAGAACGTCGACCAATGCTCCAAGAATTCAACAATAATCCCTTATATAGTGGGAAGATGGAGATTGAAACTTTCTTGGAATGGGACATAATTTCAAGATTTAAGGAGAGAATGCAAGGGAAAGATTCATGGGACTATTCGATTTCTGGAATAAGATTTCTGTGGGAAAATATCATTCAATCAATAAGGAAAGTGAAGTCTGGTGATAAAAGTCTTGGATGCATTCTTGCTCACACAATGGGTCTTGGTAAAACTTTTCAGGTTATAGCATTCTTCTACACTGCCATGAGAAATGTGGACTTGGGTTTACGAACAGAACTTAGAGTCACCCCTGTTAATGTGTTGCATAATTGGCCGCAAGAATTCTTCAAGTGGAGGCCTTCAGAATTAAAGCCCCTTCGTGTTTTCATGCTGGAAGACGTAACAAGGGAGAGAAGGGCGCAATTGCTTGCTAAGTGAAGAGCTACGGGTGGTGTCTTTTTAATTGGCTATAGTGCTTTCGAAAATTCTTCACTTGGTAGACATGTCAAGGACCGGCACATGGCTAAAGAAATTTACCATGCCTTGCAGGATGGGCCCGATATTCCTGTATGTGATGAGGCCCACATGATTAAGAACACCAAGGCTGATTTAACCCAGGCATTGAAAAGAGATGGAAACTTTGGAAGAAGGGTAAAGATTGGTATAGGCTAGATGGAAGAATTGGGAGTTCTAAAAGACAGAAGTTTGTTGCTCGCCAACAGGTCTACCGTACTATTTCTCGAGAAGAAATGTTGCATCTTTTTGGCCGTTTATTACCTAACTCGAGGTCGAGTTATTTTTGTTGGGTGGGGAAATCTGATGTAGCCGATTATATGTCTTTTAGTTAGTTATCTCTTTAGTCTATCATGTGATTAGCATGTGTCTTGTAAGTTTGTAACCACTCTTAGTTAGTTCCTTTGCCTATTTAAAGGCTGGAACTTCATTAATAAATCATCATTCATTCATTCTTAATTAAATATCAAGTTTCGGCAATGCTAGCAATGACCTTCACTTTTCTCTCCTCCTTCTCTCCTCCGATGACTCCGTCTAATCTCCGATGAGCTTTCCGATTGGGTTTTGTGCGCTAGGTGAGGGAGAGCCGGGTGTTTAGGGATCTGGAGGACTTTCCAGAGGGGAGGGTGGGGTTTGTCTTGGGTTTTCGTCGGAGTTTTCATGGAGGTTAGAAGGTTCTTAAAATAGTTGGTCCCGATGGCGATTCCGAGAGTGTGCAGAACCCGGATAGAGAACAAATCATTTTCATGCGGTTTCGACAGAAATTATAGAGGAAGAGTGATAAGGATTCAAGAGATTCACCTTAGGAAGAAGTTTTTTCTGTCTGCAGAAGAAGTTTTTTCTGTCTGCAGAAGAAGTAGTTATCGTCTGGATTATTGACTCGATCGAGGATCTGCTCCACGCCCCAGCTACTCACAAGTTCTTCAGAAAGGTCGACTGCAAAAACGGTTTCATTTGGATCCAAAAAATCTCCAACAAACGAGGGAGTTTCTTGGAGATTACAAAGGTCAATTCCTCGGGCGGTAAACATAACCTGGTTGTCCCAGCTGGGGATGATTACAAGGGGTGGAGAAACTTCTCTGATTTACTAAAAAAATTTCTCAACGGTGGGGATGAGCTTCTGGAAGAGAAAAAAGATATAGAACAAGGGGATAGGTTAATCAGAAAAGGGAAATCGTTTGTTGATATTGTAAAAAGAAATTCGAGTCCCATGGCCCCAAAAGAAACCCCACCTTCGATAAACAGTCAAGAATCAAATAGAAAAGTGTGGAATGGTTTACCTGAGTGCAGAGGATGCTCGGTAGATGCGAGGAAGATTAATTGGGAAGAAGTCATAGTTATTACCAAAAGAGATTTTCATGATGACTGGGGAAGAATTCTAGATATTTTGCAAAATCAGCTGTAGGAACTCCTTGTTATTAACCCCTTTCTTCCGGACAAGGCTCTTCTTAAATGTCCTTCCCGTCAGCTAGCTAATTTGCTCGCTAAAAATAAAGGGTGGGTGAGTTTTGGTCCGATTATATTGAAGGTGGAGAAATGGGACAAAAAACTTCACTCTAGAATTTCCTGTATACCCTGCTATGGTGGTTGGGTCAAGCTTCGAAACCTCCCTCTGCATTTATGGAACCTTAAGACATTTAAAGCTATCGGGGACAGTCTTGGAGGGTTCATTGAATATGATGAGGTTAATTCCTTGCTCATTGAATGCGTGGAGGTTAAATTGAAAATCAAGGATAATTATTGTGGGTTCATTCCAGCCGAGGTGAGAATAAAGGACGGGGACGACCACTTCAATGTGCAAATCGTCACCTTCCAAGACGGGAACTTGTTGATAGACAAAGTGGCTGGGCTTCACAGCAGCTTCTCACCAACGGCAGCCCAGGGATTCCACAGAGGGCCTCTCGATCCCATCTTTTGCACAATGGATAGATGGAGGATTGAGGACAGTATGGATTACCCAGTGGTCAAAACTCTGCATTCGGAAGAAGACCTCAGGACAGGTGGAGGACAGCTGGTGGGCAATATTACAGATTTTGAAATTTCCCGCTCAAAAAACAAAGGAAAAGCCCTAGTCGAAGCTGGGTCCTCAGAACCCTTTGATGCGATGGCCCGAGTGGAAGCCCATTTTCAAGTTGCCCAGTCAGAATTAGAAGAAGGAGATTGGGTCGTAAAGCGGCCCAAAAAGAAAAATAAAAAAGGGGTTTCCTTTGCCAAAGAGACCCAGATTTCCGTTTTTAAAAAGGGGGAGGTCCACTCCACTAGTACATCGAAAAGCCCACAAAGAAAGGATGGATTGGCCGAAGTCTGGAATGGCGAACAAGGTATTGAATCCGACCTCTCCTTCTCGAGCCCAGTGTCACAATCGCGGTCTTTAGGGTCTCGTAAAGCGACTGTGCGGCACTTACTTTCGCTCACAAGTAAGTCAGCCAACTCGAAAACGGATCGCCGGTGGCACAACGGGCGAATATCGCAACCTCTACCCCCGTTCTTGGAAAACGGTTTTAGAAAACGGGGTTAG

mRNA sequence

ATGATGACCAAGAGAGTCTCGACCAACGTGGGAGGAGATTCATCTTCGGTTGGAAAAGAGGCAGAGCCTACCACCGCCCTCTCACCACGAGCAACAACCGTACGCTTGCTGTCGGTTGAACAAGATGAGAAAATCTTGAAGAATGATGTGGGAGCTGAATTCAAAACAAGACAGTGGCAAGAAAAGCTAGGAATGGAACAAAGAGTGGTCCAAGAAGTAGATTTGCCTCCAAGAATGGTCCAAGAAGTAGATTCTCCTCCAAGAATCCATCAAGAACGTCGACCAATGCTCCAAGAATTCAACAATAATCCCTTATATAGTGGGAAGATGGAGATTGAAACTTTCTTGGAATGGGACATAATTTCAAGATTTAAGGAGAGAATGCAAGGGAAAGATTCATGGGACTATTCGATTTCTGGAATAAGATTTCTGTGGGAAAATATCATTCAATCAATAAGGAAAGTGAAGTCTGGTGATAAAAGTCTTGGATGCATTCTTGCTCACACAATGGGTCTTGGTAAAACTTTTCAGGTTATAGCATTCTTCTACACTGCCATGAGAAATGTGGACTTGGGTTTACGAACAGAACTTAGAGTCACCCCTGTTAATGTGTTGCATAATTGGCCGCAAGAATTCTTCAAGTGGAGGCCTTCAGAATTAAAGCCCCTTCGTGTTTTCATGCTGGAAGACGATGGGCCCGATATTCCTGTATGTGATGAGGCCCACATGATTAAGAACACCAAGGCTGATTTAACCCAGGCATTGAAAAGAGATGGAAACTTTGGAAGAAGGGTGAGGGAGAGCCGGGTGTTTAGGGATCTGGAGGACTTTCCAGAGGGGAGGGTGGGGTTTGTCTTGGGTTTTCGTCGGAGTTTTCATGGAGAAGAAGTAGTTATCGTCTGGATTATTGACTCGATCGAGGATCTGCTCCACGCCCCAGCTACTCACAAGTTCTTCAGAAAGGTCGACTGCAAAAACGGTTTCATTTGGATCCAAAAAATCTCCAACAAACGAGGGAGTTTCTTGGAGATTACAAAGGTCAATTCCTCGGGCGGTAAACATAACCTGGTTGTCCCAGCTGGGGATGATTACAAGGGGTGGAGAAACTTCTCTGATTTACTAAAAAAATTTCTCAACGGTGGGGATGAGCTTCTGGAAGAGAAAAAAGATATAGAACAAGGGGATAGGTTAATCAGAAAAGGGAAATCGTTTGTTGATATTGAACTCCTTGTTATTAACCCCTTTCTTCCGGACAAGGCTCTTCTTAAATGTCCTTCCCGTCAGCTAGCTAATTTGCTCGCTAAAAATAAAGGGTGGGTGAGTTTTGGTCCGATTATATTGAAGGTGGAGAAATGGGACAAAAAACTTCACTCTAGAATTTCCTGTATACCCTGCTATGGTGGTTGGGTCAAGCTTCGAAACCTCCCTCTGCATTTATGGAACCTTAAGACATTTAAAGCTATCGGGGACAGTCTTGGAGGGTTCATTGAATATGATGAGGTTAATTCCTTGCTCATTGAATGCGTGGAGGTTAAATTGAAAATCAAGGATAATTATTGTGGGTTCATTCCAGCCGAGGTGAGAATAAAGGACGGGGACGACCACTTCAATGTGCAAATCGTCACCTTCCAAGACGGGAACTTGTTGATAGACAAAGTGGCTGGGCTTCACAGCAGCTTCTCACCAACGGCAGCCCAGGGATTCCACAGAGGGCCTCTCGATCCCATCTTTTGCACAATGGATAGATGGAGGATTGAGGACAGTATGGATTACCCAGTGGTCAAAACTCTGCATTCGGAAGAAGACCTCAGGACAGGTGGAGGACAGCTGGTGGGCAATATTACAGATTTTGAAATTTCCCGCTCAAAAAACAAAGGAAAAGCCCTAGTCGAAGCTGGGTCCTCAGAACCCTTTGATGCGATGGCCCGAGTGGAAGCCCATTTTCAAGTTGCCCAGTCAGAATTAGAAGAAGGAGATTGGGTCGTAAAGCGGCCCAAAAAGAAAAATAAAAAAGGGGTTTCCTTTGCCAAAGAGACCCAGATTTCCGTTTTTAAAAAGGGGGAGGTCCACTCCACTAGTACATCGAAAAGCCCACAAAGAAAGGATGGATTGGCCGAAGTCTGGAATGGCGAACAAGGTATTGAATCCGACCTCTCCTTCTCGAGCCCAGTGTCACAATCGCGGTCTTTAGGGTCTCGTAAAGCGACTGTGCGGCACTTACTTTCGCTCACAAGTAAGTCAGCCAACTCGAAAACGGATCGCCGGTGGCACAACGGGCGAATATCGCAACCTCTACCCCCGTTCTTGGAAAACGGTTTTAGAAAACGGGGTTAG

Coding sequence (CDS)

ATGATGACCAAGAGAGTCTCGACCAACGTGGGAGGAGATTCATCTTCGGTTGGAAAAGAGGCAGAGCCTACCACCGCCCTCTCACCACGAGCAACAACCGTACGCTTGCTGTCGGTTGAACAAGATGAGAAAATCTTGAAGAATGATGTGGGAGCTGAATTCAAAACAAGACAGTGGCAAGAAAAGCTAGGAATGGAACAAAGAGTGGTCCAAGAAGTAGATTTGCCTCCAAGAATGGTCCAAGAAGTAGATTCTCCTCCAAGAATCCATCAAGAACGTCGACCAATGCTCCAAGAATTCAACAATAATCCCTTATATAGTGGGAAGATGGAGATTGAAACTTTCTTGGAATGGGACATAATTTCAAGATTTAAGGAGAGAATGCAAGGGAAAGATTCATGGGACTATTCGATTTCTGGAATAAGATTTCTGTGGGAAAATATCATTCAATCAATAAGGAAAGTGAAGTCTGGTGATAAAAGTCTTGGATGCATTCTTGCTCACACAATGGGTCTTGGTAAAACTTTTCAGGTTATAGCATTCTTCTACACTGCCATGAGAAATGTGGACTTGGGTTTACGAACAGAACTTAGAGTCACCCCTGTTAATGTGTTGCATAATTGGCCGCAAGAATTCTTCAAGTGGAGGCCTTCAGAATTAAAGCCCCTTCGTGTTTTCATGCTGGAAGACGATGGGCCCGATATTCCTGTATGTGATGAGGCCCACATGATTAAGAACACCAAGGCTGATTTAACCCAGGCATTGAAAAGAGATGGAAACTTTGGAAGAAGGGTGAGGGAGAGCCGGGTGTTTAGGGATCTGGAGGACTTTCCAGAGGGGAGGGTGGGGTTTGTCTTGGGTTTTCGTCGGAGTTTTCATGGAGAAGAAGTAGTTATCGTCTGGATTATTGACTCGATCGAGGATCTGCTCCACGCCCCAGCTACTCACAAGTTCTTCAGAAAGGTCGACTGCAAAAACGGTTTCATTTGGATCCAAAAAATCTCCAACAAACGAGGGAGTTTCTTGGAGATTACAAAGGTCAATTCCTCGGGCGGTAAACATAACCTGGTTGTCCCAGCTGGGGATGATTACAAGGGGTGGAGAAACTTCTCTGATTTACTAAAAAAATTTCTCAACGGTGGGGATGAGCTTCTGGAAGAGAAAAAAGATATAGAACAAGGGGATAGGTTAATCAGAAAAGGGAAATCGTTTGTTGATATTGAACTCCTTGTTATTAACCCCTTTCTTCCGGACAAGGCTCTTCTTAAATGTCCTTCCCGTCAGCTAGCTAATTTGCTCGCTAAAAATAAAGGGTGGGTGAGTTTTGGTCCGATTATATTGAAGGTGGAGAAATGGGACAAAAAACTTCACTCTAGAATTTCCTGTATACCCTGCTATGGTGGTTGGGTCAAGCTTCGAAACCTCCCTCTGCATTTATGGAACCTTAAGACATTTAAAGCTATCGGGGACAGTCTTGGAGGGTTCATTGAATATGATGAGGTTAATTCCTTGCTCATTGAATGCGTGGAGGTTAAATTGAAAATCAAGGATAATTATTGTGGGTTCATTCCAGCCGAGGTGAGAATAAAGGACGGGGACGACCACTTCAATGTGCAAATCGTCACCTTCCAAGACGGGAACTTGTTGATAGACAAAGTGGCTGGGCTTCACAGCAGCTTCTCACCAACGGCAGCCCAGGGATTCCACAGAGGGCCTCTCGATCCCATCTTTTGCACAATGGATAGATGGAGGATTGAGGACAGTATGGATTACCCAGTGGTCAAAACTCTGCATTCGGAAGAAGACCTCAGGACAGGTGGAGGACAGCTGGTGGGCAATATTACAGATTTTGAAATTTCCCGCTCAAAAAACAAAGGAAAAGCCCTAGTCGAAGCTGGGTCCTCAGAACCCTTTGATGCGATGGCCCGAGTGGAAGCCCATTTTCAAGTTGCCCAGTCAGAATTAGAAGAAGGAGATTGGGTCGTAAAGCGGCCCAAAAAGAAAAATAAAAAAGGGGTTTCCTTTGCCAAAGAGACCCAGATTTCCGTTTTTAAAAAGGGGGAGGTCCACTCCACTAGTACATCGAAAAGCCCACAAAGAAAGGATGGATTGGCCGAAGTCTGGAATGGCGAACAAGGTATTGAATCCGACCTCTCCTTCTCGAGCCCAGTGTCACAATCGCGGTCTTTAGGGTCTCGTAAAGCGACTGTGCGGCACTTACTTTCGCTCACAAGTAAGTCAGCCAACTCGAAAACGGATCGCCGGTGGCACAACGGGCGAATATCGCAACCTCTACCCCCGTTCTTGGAAAACGGTTTTAGAAAACGGGGTTAG

Protein sequence

MMTKRVSTNVGGDSSSVGKEAEPTTALSPRATTVRLLSVEQDEKILKNDVGAEFKTRQWQEKLGMEQRVVQEVDLPPRMVQEVDSPPRIHQERRPMLQEFNNNPLYSGKMEIETFLEWDIISRFKERMQGKDSWDYSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRTELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLEDDGPDIPVCDEAHMIKNTKADLTQALKRDGNFGRRVRESRVFRDLEDFPEGRVGFVLGFRRSFHGEEVVIVWIIDSIEDLLHAPATHKFFRKVDCKNGFIWIQKISNKRGSFLEITKVNSSGGKHNLVVPAGDDYKGWRNFSDLLKKFLNGGDELLEEKKDIEQGDRLIRKGKSFVDIELLVINPFLPDKALLKCPSRQLANLLAKNKGWVSFGPIILKVEKWDKKLHSRISCIPCYGGWVKLRNLPLHLWNLKTFKAIGDSLGGFIEYDEVNSLLIECVEVKLKIKDNYCGFIPAEVRIKDGDDHFNVQIVTFQDGNLLIDKVAGLHSSFSPTAAQGFHRGPLDPIFCTMDRWRIEDSMDYPVVKTLHSEEDLRTGGGQLVGNITDFEISRSKNKGKALVEAGSSEPFDAMARVEAHFQVAQSELEEGDWVVKRPKKKNKKGVSFAKETQISVFKKGEVHSTSTSKSPQRKDGLAEVWNGEQGIESDLSFSSPVSQSRSLGSRKATVRHLLSLTSKSANSKTDRRWHNGRISQPLPPFLENGFRKRG

Homology

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BLAST of Spg008205 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia])

HSP 1 Score: 233.4 bits (594), Expect = 6.6e-57
Identity = 103/204 (50.49%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 411 VINPFLPDKALLKCPSRQLANLLAKNKGWVSFGPIILKVEKWDKKLHSRISCIPCYGGWV 470
           +INPF  DKAL+KCPS+ LA LL  NKGWV+FGP+ +K+E W+  LH R    P YG WV
Sbjct: 77  IINPFQADKALMKCPSKDLACLLLTNKGWVTFGPVTVKLEAWNPLLHGRAFLFPSYGNWV 136

Query: 471 KLRNLPLHLWNLKTFKAIGDSLGGFIEYDEVNSLLIECVEVKLKIKDNYCGFIPAEVRIK 530
           K+RN+PLHLW+L TFKAIG++LGGFI+YD+ NS  IEC +V +K+K NYCGFIPAE+   
Sbjct: 137 KIRNIPLHLWSLATFKAIGNALGGFIDYDDNNSCFIECFDVAIKVKSNYCGFIPAEISSM 196

Query: 531 DGDDHFNVQIVTFQDGNLLIDKVAGLHSSFSPTAAQGFHRGPLDPIFCTMDRWRIEDSMD 590
           DG   F  ++V+F+D   L  K  G+H  FS  AA+ FH+G  +    ++DRWR+E+  +
Sbjct: 197 DGPLCFQAKVVSFEDSKWLARKDVGIHGGFSSEAARSFHQGSAEQSANSIDRWRLENGCN 256

Query: 591 YPVVKTLHSE----EDLRTGGGQL 611
           YP V   +      +  R GG +L
Sbjct: 257 YPGVNIQYPNFIPFKSARNGGSKL 280

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BLAST of Spg008205 vs. NCBI nr
Match: KAG7020999.1 (Protein CHROMATIN REMODELING 20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-48
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 685 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 744

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 745 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 804

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 805 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 856

[Close]

BLAST of Spg008205 vs. NCBI nr
Match: XP_022937760.1 (protein CHROMATIN REMODELING 20 isoform X3 [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-48
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 508 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 567

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 568 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 627

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 628 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 679

[Close]

BLAST of Spg008205 vs. NCBI nr
Match: XP_022965425.1 (protein CHROMATIN REMODELING 20 isoform X2 [Cucurbita maxima])

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-48
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 718 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 777

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 778 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 837

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 838 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 889

[Close]

BLAST of Spg008205 vs. NCBI nr
Match: XP_022965424.1 (protein CHROMATIN REMODELING 20 isoform X1 [Cucurbita maxima])

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-48
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 720 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 779

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 780 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 839

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 840 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 891

[Close]

BLAST of Spg008205 vs. ExPASy Swiss-Prot
Match: F4HW51 (Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana OX=3702 GN=ATRX PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-45
Identity = 98/172 (56.98%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + ++GIRF+WENIIQSI +VKSGDK LGCILAHTMGLGKTFQVIAF YTAMR VDLGL+T
Sbjct: 722 HQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKT 781

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            L VTPVNVLHNW  EF KW PSE+KPLR+FML D                         
Sbjct: 782 ALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYT 841

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAH+IKNTKAD TQALK+
Sbjct: 842 NFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQ 893

[Close]

BLAST of Spg008205 vs. ExPASy Swiss-Prot
Match: P46100 (Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=5)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-15
Identity = 53/174 (30.46%), Postives = 75/174 (43.10%), Query Frame = 0


Query: 136  YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
            + + G++F+W+   +S++K K    S GCILAH MGLGKT QV++F +T +    L   T
Sbjct: 1563 HQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKTLQVVSFLHTVLLCDKLDFST 1622

Query: 196  ELRVTPVNVLHNWPQEFFKW-------------------RPSE----------------- 255
             L V P+N   NW  EF KW                   RP E                 
Sbjct: 1623 ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMII 1682

[Close]

BLAST of Spg008205 vs. ExPASy Swiss-Prot
Match: Q7YQM4 (Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-15
Identity = 53/174 (30.46%), Postives = 75/174 (43.10%), Query Frame = 0


Query: 136  YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
            + + G++F+W+   +S++K K    S GCILAH MGLGKT QV++F +T +    L   T
Sbjct: 1563 HQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKTLQVVSFLHTVLLCDKLDFST 1622

Query: 196  ELRVTPVNVLHNWPQEFFKW-------------------RPSE----------------- 255
             L V P+N   NW  EF KW                   RP E                 
Sbjct: 1623 ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMII 1682

[Close]

BLAST of Spg008205 vs. ExPASy Swiss-Prot
Match: Q7YQM3 (Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-15
Identity = 53/174 (30.46%), Postives = 75/174 (43.10%), Query Frame = 0


Query: 136  YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
            + + G++F+W+   +S++K K    S GCILAH MGLGKT QV++F +T +    L   T
Sbjct: 1563 HQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKTLQVVSFLHTVLLCDKLDFST 1622

Query: 196  ELRVTPVNVLHNWPQEFFKW-------------------RPSE----------------- 255
             L V P+N   NW  EF KW                   RP E                 
Sbjct: 1623 ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMII 1682

[Close]

BLAST of Spg008205 vs. ExPASy Swiss-Prot
Match: Q61687 (Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-15
Identity = 53/174 (30.46%), Postives = 74/174 (42.53%), Query Frame = 0


Query: 136  YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
            + + G++F+W+   +S+ K K    S GCILAH MGLGKT QV++F +T +    L   T
Sbjct: 1548 HQVDGVQFMWDCCCESVEKTKKSPGS-GCILAHCMGLGKTLQVVSFLHTVLLCDKLDFST 1607

Query: 196  ELRVTPVNVLHNWPQEFFKW-------------------RPSE----------------- 255
             L V P+N   NW  EF KW                   RP E                 
Sbjct: 1608 ALVVCPLNTALNWMNEFEKWQEGLNDNEKLEVSELATVKRPQERSYMLQRWQEDGGVMII 1667

[Close]

BLAST of Spg008205 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-57
Identity = 103/204 (50.49%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 411 VINPFLPDKALLKCPSRQLANLLAKNKGWVSFGPIILKVEKWDKKLHSRISCIPCYGGWV 470
           +INPF  DKAL+KCPS+ LA LL  NKGWV+FGP+ +K+E W+  LH R    P YG WV
Sbjct: 77  IINPFQADKALMKCPSKDLACLLLTNKGWVTFGPVTVKLEAWNPLLHGRAFLFPSYGNWV 136

Query: 471 KLRNLPLHLWNLKTFKAIGDSLGGFIEYDEVNSLLIECVEVKLKIKDNYCGFIPAEVRIK 530
           K+RN+PLHLW+L TFKAIG++LGGFI+YD+ NS  IEC +V +K+K NYCGFIPAE+   
Sbjct: 137 KIRNIPLHLWSLATFKAIGNALGGFIDYDDNNSCFIECFDVAIKVKSNYCGFIPAEISSM 196

Query: 531 DGDDHFNVQIVTFQDGNLLIDKVAGLHSSFSPTAAQGFHRGPLDPIFCTMDRWRIEDSMD 590
           DG   F  ++V+F+D   L  K  G+H  FS  AA+ FH+G  +    ++DRWR+E+  +
Sbjct: 197 DGPLCFQAKVVSFEDSKWLARKDVGIHGGFSSEAARSFHQGSAEQSANSIDRWRLENGCN 256

Query: 591 YPVVKTLHSE----EDLRTGGGQL 611
           YP V   +      +  R GG +L
Sbjct: 257 YPGVNIQYPNFIPFKSARNGGSKL 280

[Close]

BLAST of Spg008205 vs. ExPASy TrEMBL
Match: A0A6J1HQY8 (ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-49
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 720 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 779

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 780 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 839

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 840 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 891

[Close]

BLAST of Spg008205 vs. ExPASy TrEMBL
Match: A0A6J1HNN1 (ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-49
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 718 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 777

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 778 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 837

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 838 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 889

[Close]

BLAST of Spg008205 vs. ExPASy TrEMBL
Match: A0A6J1HLN1 (ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-49
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 628 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 687

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 688 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 747

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 748 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 799

[Close]

BLAST of Spg008205 vs. ExPASy TrEMBL
Match: A0A6J1FGU8 (ATP-dependent helicase ATRX OS=Cucurbita moschata OX=3662 GN=LOC111444063 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-49
Identity = 106/172 (61.63%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + +SGIRF+WENIIQS+RKVKSGDK LGCILAHTMGLGKTFQVIAF YTAMRNVDLGLRT
Sbjct: 626 HQVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRT 685

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            + VTPVNVLHNW QEFF+W+PSELKPLRVFMLED                         
Sbjct: 686 AVIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYS 745

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAHMIKNTKAD+TQALK+
Sbjct: 746 AFRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQ 797

[Close]

BLAST of Spg008205 vs. TAIR 10
Match: AT1G08600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 3.1e-49
Identity = 98/151 (64.90%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + ++GIRF+WENIIQSI +VKSGDK LGCILAHTMGLGKTFQVIAF YTAMR VDLGL+T
Sbjct: 722 HQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKT 781

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            L VTPVNVLHNW  EF KW PSE+KPLR+FML D                         
Sbjct: 782 ALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRYKFFYERNFWGVKDLNAARGIC 841

Query: 256 ----DGPDIPVCDEAHMIKNTKADLTQALKR 258
               DGPDI VCDEAH+IKNTKAD TQALK+
Sbjct: 842 NALRDGPDILVCDEAHIIKNTKADTTQALKQ 872

[Close]

BLAST of Spg008205 vs. TAIR 10
Match: AT1G08600.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 8.6e-47
Identity = 98/172 (56.98%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + ++GIRF+WENIIQSI +VKSGDK LGCILAHTMGLGKTFQVIAF YTAMR VDLGL+T
Sbjct: 722 HQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKT 781

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            L VTPVNVLHNW  EF KW PSE+KPLR+FML D                         
Sbjct: 782 ALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYT 841

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAH+IKNTKAD TQALK+
Sbjct: 842 NFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQ 893

[Close]

BLAST of Spg008205 vs. TAIR 10
Match: AT1G08600.4 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 8.6e-47
Identity = 98/172 (56.98%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + ++GIRF+WENIIQSI +VKSGDK LGCILAHTMGLGKTFQVIAF YTAMR VDLGL+T
Sbjct: 722 HQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKT 781

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            L VTPVNVLHNW  EF KW PSE+KPLR+FML D                         
Sbjct: 782 ALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYT 841

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAH+IKNTKAD TQALK+
Sbjct: 842 NFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQ 893

[Close]

BLAST of Spg008205 vs. TAIR 10
Match: AT1G08600.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 8.6e-47
Identity = 98/172 (56.98%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 136 YSISGIRFLWENIIQSIRKVKSGDKSLGCILAHTMGLGKTFQVIAFFYTAMRNVDLGLRT 195
           + ++GIRF+WENIIQSI +VKSGDK LGCILAHTMGLGKTFQVIAF YTAMR VDLGL+T
Sbjct: 722 HQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKT 781

Query: 196 ELRVTPVNVLHNWPQEFFKWRPSELKPLRVFMLED------------------------- 255
            L VTPVNVLHNW  EF KW PSE+KPLR+FML D                         
Sbjct: 782 ALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYT 841

Query: 256 -------------------------DGPDIPVCDEAHMIKNTKADLTQALKR 258
                                    DGPDI VCDEAH+IKNTKAD TQALK+
Sbjct: 842 NFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQ 893

[Close]

BLAST of Spg008205 vs. TAIR 10
Match: AT3G42670.1 (chromatin remodeling 38 )

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-08
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 118 WDIISRFKERMQGKDSWDYSISGIRFLWENIIQSIRKV---KSGDKSLGCILAHTMGLGK 177
           W +I + K ++       +      FLW+N+  S+       S DK  GC+++HT G GK
Sbjct: 664 WSLIPQLKRKLH-----LHQKKAFEFLWKNLAGSVVPAMMDPSSDKIGGCVVSHTPGAGK 723

Query: 178 TFQVIAFFYTAMRNVDLGLRTELRVTPVNVLHNWPQEFFKW 216
           TF +IAF  + ++ +  G R  L + P   L+ W +EF KW
Sbjct: 724 TFLIIAFLASYLK-IFPGKR-PLVLAPKTTLYTWYKEFIKW 757

The following BLAST results are available for this feature:

BLAST of Spg008205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149859.1	6.6e-57	50.49	uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncha...	[more]
KAG7020999.1	1.1e-48	61.63	Protein CHROMATIN REMODELING 20 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022937760.1	1.1e-48	61.63	protein CHROMATIN REMODELING 20 isoform X3 [Cucurbita moschata]	[more]
XP_022965425.1	1.1e-48	61.63	protein CHROMATIN REMODELING 20 isoform X2 [Cucurbita maxima]	[more]
XP_022965424.1	1.1e-48	61.63	protein CHROMATIN REMODELING 20 isoform X1 [Cucurbita maxima]	[more]

BLAST of Spg008205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HW51	1.2e-45	56.98	Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana OX=3702 GN=ATRX PE=2 SV=...	[more]
P46100	1.3e-15	30.46	Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=5	[more]
Q7YQM4	1.3e-15	30.46	Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1	[more]
Q7YQM3	1.3e-15	30.46	Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1	[more]
Q61687	2.2e-15	30.46	Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3	[more]

BLAST of Spg008205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6X4	3.2e-57	50.49	uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1HQY8	5.4e-49	61.63	ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=...	[more]
A0A6J1HNN1	5.4e-49	61.63	ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=...	[more]
A0A6J1HLN1	5.4e-49	61.63	ATP-dependent helicase ATRX OS=Cucurbita maxima OX=3661 GN=LOC111465339 PE=3 SV=...	[more]
A0A6J1FGU8	5.4e-49	61.63	ATP-dependent helicase ATRX OS=Cucurbita moschata OX=3662 GN=LOC111444063 PE=3 S...	[more]

BLAST of Spg008205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08600.1	3.1e-49	64.90	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G08600.3	8.6e-47	56.98	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G08600.4	8.6e-47	56.98	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G08600.2	8.6e-47	56.98	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G42670.1	2.7e-08	32.67	chromatin remodeling 38	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000330	SNF2, N-terminal	PFAM	PF00176	SNF2_N	coord: 155..219 e-value: 5.3E-9 score: 35.3
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 437..504 e-value: 6.1E-10 score: 38.8
None	No IPR available	GENE3D	3.30.2450.30		coord: 320..407 e-value: 4.4E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 741..777
None	No IPR available	PANTHER	PTHR45797:SF1	RAD54-LIKE	coord: 138..230
None	No IPR available	PANTHER	PTHR45797:SF1	RAD54-LIKE	coord: 230..257
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 124..232 e-value: 2.3E-21 score: 77.7
IPR044574	ATPase ARIP4-like	PANTHER	PTHR45797	RAD54-LIKE	coord: 230..257
IPR044574	ATPase ARIP4-like	PANTHER	PTHR45797	RAD54-LIKE	coord: 138..230
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 158..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008205.1	Spg008205.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140658	ATP-dependent chromatin remodeler activity
molecular_function	GO:0016887	ATP hydrolysis activity