Spg007904 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGAACCTTAACCCTAAGGATCTTAACATTGGACCTATCATTCTTTGGAAGACATGGTCCCTCTGCAACAAAATTTCAGCCAACAATCAAGACGCAAATGCTGAGTACTTTTTCCAAGATATTCAGAACAGTGTAAAGGAAGTGGAAGAAGCGTACCTGAACAGCCATCAGTCGAGAAGAATTGGGAATCTCTCGAGTCAAGTTCACCAAGTCCCCTGGAAAATCCCAAACCCGAATTGCTGGCGATTAAGCGCAGATGCAACCTGGAGTGAAAAGCGTGGAATCGGAGGTTTGGGCTGGGTTGTGCATGACTCGGAAAGATCCCTCGTTTGTCTCAGAATGCATAAAATTTATCGAAATTGGTCAATGAAGATGTTGGAAGCGAAAGCTATTTTGGAAGCGCTAAAGGCGTTAATCAGTACCTGCAATCAAAGGGGTGTGTTCCGCCTCTCTTTAATTTTGAAATATTTACAGCTTTAA ATGGAAGAGAACCTTAACCCTAAGGATCTTAACATTGGACCTATCATTCTTTGGAAGACATGGTCCCTCTGCAACAAAATTTCAGCCAACAATCAAGACGCAAATGCTGAGTACTTTTTCCAAGATATTCAGAACAGTGTAAAGGAAGTGGAAGAAGCGTACCTGAACAGCCATCAGTCGAGAAGAATTGGGAATCTCTCGAGTCAAGTTCACCAAGTCCCCTGGAAAATCCCAAACCCGAATTGCTGGCGATTAAGCGCAGATGCAACCTGGAGTGAAAAGCGTGGAATCGGAGGTTTGGGCTGGGTTGTGCATGACTCGGAAAGATCCCTCGTTTGTCTCAGAATGCATAAAATTTATCGAAATTGGTCAATGAAGATGTTGGAAGCGAAAGCTATTTTGGAAGCGCTAAAGGCGTTAATCAGTACCTGCAATCAAAGGGGTGTGTTCCGCCTCTCTTTAATTTTGAAATATTTACAGCTTTAA ATGGAAGAGAACCTTAACCCTAAGGATCTTAACATTGGACCTATCATTCTTTGGAAGACATGGTCCCTCTGCAACAAAATTTCAGCCAACAATCAAGACGCAAATGCTGAGTACTTTTTCCAAGATATTCAGAACAGTGTAAAGGAAGTGGAAGAAGCGTACCTGAACAGCCATCAGTCGAGAAGAATTGGGAATCTCTCGAGTCAAGTTCACCAAGTCCCCTGGAAAATCCCAAACCCGAATTGCTGGCGATTAAGCGCAGATGCAACCTGGAGTGAAAAGCGTGGAATCGGAGGTTTGGGCTGGGTTGTGCATGACTCGGAAAGATCCCTCGTTTGTCTCAGAATGCATAAAATTTATCGAAATTGGTCAATGAAGATGTTGGAAGCGAAAGCTATTTTGGAAGCGCTAAAGGCGTTAATCAGTACCTGCAATCAAAGGGGTGTGTTCCGCCTCTCTTTAATTTTGAAATATTTACAGCTTTAA MEENLNPKDLNIGPIILWKTWSLCNKISANNQDANAEYFFQDIQNSVKEVEEAYLNSHQSRRIGNLSSQVHQVPWKIPNPNCWRLSADATWSEKRGIGGLGWVVHDSERSLVCLRMHKIYRNWSMKMLEAKAILEALKALISTCNQRGVFRLSLILKYLQL Homology
BLAST of Spg007904 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06 Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Spg007904 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia]) HSP 1 Score: 61.6 bits (148), Expect = 7.1e-06 Identity = 37/144 (25.69%), Postives = 62/144 (43.06%), Query Frame = 0
BLAST of Spg007904 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 61.2 bits (147), Expect = 9.2e-06 Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0
BLAST of Spg007904 vs. NCBI nr
Match: XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia]) HSP 1 Score: 58.5 bits (140), Expect = 6.0e-05 Identity = 31/110 (28.18%), Postives = 52/110 (47.27%), Query Frame = 0
BLAST of Spg007904 vs. NCBI nr
Match: CAA7055611.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 58.2 bits (139), Expect = 7.8e-05 Identity = 31/135 (22.96%), Postives = 63/135 (46.67%), Query Frame = 0
BLAST of Spg007904 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.4e-06 Identity = 37/144 (25.69%), Postives = 62/144 (43.06%), Query Frame = 0
BLAST of Spg007904 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.5e-06 Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0
BLAST of Spg007904 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.9e-05 Identity = 31/110 (28.18%), Postives = 52/110 (47.27%), Query Frame = 0
BLAST of Spg007904 vs. ExPASy TrEMBL
Match: A0A6D2KM87 (RNase H domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS42847 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05 Identity = 31/135 (22.96%), Postives = 63/135 (46.67%), Query Frame = 0
BLAST of Spg007904 vs. ExPASy TrEMBL
Match: A0A1J3C7A8 (Putative ribonuclease H protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR12511_c0_g1_i1_g.40014 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.9e-05 Identity = 35/134 (26.12%), Postives = 60/134 (44.78%), Query Frame = 0
BLAST of Spg007904 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 25/135 (18.52%), Postives = 59/135 (43.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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